EY666528

Overview
NameEY666528
Unique NameEY666528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF3_RAT (ADP-ribosylation factor 3 OS=Rattus norvegicus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.130e-34
Identity = 71/161 (44.10%), Postives = 104/161 (64.60%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+++ + EL  +L E+ L  A LL+ ANKQD+  A+   EI   L L ++ + R+W I    A +G+GL EG DWL   + ++
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF3_PONAB (ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 PE=2 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 1.130e-34
Identity = 71/161 (44.10%), Postives = 104/161 (64.60%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+++ + EL  +L E+ L  A LL+ ANKQD+  A+   EI   L L ++ + R+W I    A +G+GL EG DWL   + ++
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF3_MOUSE (ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.130e-34
Identity = 71/161 (44.10%), Postives = 104/161 (64.60%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+++ + EL  +L E+ L  A LL+ ANKQD+  A+   EI   L L ++ + R+W I    A +G+GL EG DWL   + ++
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF3_HUMAN (ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.130e-34
Identity = 71/161 (44.10%), Postives = 104/161 (64.60%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+++ + EL  +L E+ L  A LL+ ANKQD+  A+   EI   L L ++ + R+W I    A +G+GL EG DWL   + ++
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF3_BOVIN (ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE=2 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 1.130e-34
Identity = 71/161 (44.10%), Postives = 104/161 (64.60%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+++ + EL  +L E+ L  A LL+ ANKQD+  A+   EI   L L ++ + R+W I    A +G+GL EG DWL   + ++
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.130e-34
Identity = 76/161 (47.20%), Postives = 102/161 (63.35%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKIN-GEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIAS 567
            L++GLDN+GKTTI+ ++  GE  S I PT+GFN++TV Y      +WD+GGQ +IR YWR YF  T  +++VVDSSD  R+   K E   +L+E+ L GA +LI ANKQD+ GAL    + + L L  + K+R W I    A  GEGL EG DWL   + S
Sbjct:   21 LVLGLDNAGKTTILYRLQMGEVVSTI-PTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKI-KSRQWAIFKTCAVKGEGLFEGLDWLSNTLKS 179          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.927e-34
Identity = 73/161 (45.34%), Postives = 105/161 (65.22%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            L++GLD +GKTTI+ ++   +     PT+GFN++TVTY+     +WD+GGQ +IR YWR Y+  TD +++VVDS D  R+   K EL  +L+EE L  A L++ ANKQD+  A+T +E+A  L L A+ K R W+I   SA  G GL E  +WLV+ + SR
Sbjct:   21 LILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPAL-KDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF1_LOCMI (ADP-ribosylation factor 1 OS=Locusta migratoria GN=ARF1 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.927e-34
Identity = 72/154 (46.75%), Postives = 100/154 (64.94%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWL 549
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ + + EL  +L E+ L  A LLI ANKQD+  A+   EI   L L ++ + R+W I    A +G+GL EG DWL
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSL-RNRNWYIQATCATSGDGLYEGLDWL 173          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF1_DROME (ADP-ribosylation factor 1 OS=Drosophila melanogaster GN=Arf79F PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.927e-34
Identity = 72/154 (46.75%), Postives = 100/154 (64.94%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWL 549
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ + + EL  +L E+ L  A LLI ANKQD+  A+   EI   L L ++ + R+W I    A +G+GL EG DWL
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSL-RNRNWYIQATCATSGDGLYEGLDWL 173          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARL5_CAEEL (ADP-ribosylation factor-like protein 5 OS=Caenorhabditis elegans GN=arl-5 PE=2 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 2.517e-34
Identity = 67/158 (42.41%), Postives = 102/158 (64.56%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            ++VGLDN+GKTTI+     +D     PT+G N++ V+Y+     IWD+GGQ ++R  W  Y+ QTD ++ V+DSSD  R+   K +L N+L+ E L+ A +L+LANKQD+ GA+ P E++  L L+ +   R W+I GC A  GEGL E  +W+  ++
Sbjct:   21 IVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDLPGAMNPAEVSTQLGLQTLRGARKWQINGCCAVKGEGLPEALEWIANNL 178          
The following BLAST results are available for this feature:
BLAST of EY666528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
ARF3_RAT1.130e-3444.10ADP-ribosylation factor 3 OS=Rattus norvegicus GN=... [more]
ARF3_PONAB1.130e-3444.10ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 ... [more]
ARF3_MOUSE1.130e-3444.10ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 ... [more]
ARF3_HUMAN1.130e-3444.10ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 ... [more]
ARF3_BOVIN1.130e-3444.10ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE... [more]
ARF3_ARATH1.130e-3447.20ADP-ribosylation factor 3 OS=Arabidopsis thaliana ... [more]
ARL1_HUMAN1.927e-3445.34ADP-ribosylation factor-like protein 1 OS=Homo sap... [more]
ARF1_LOCMI1.927e-3446.75ADP-ribosylation factor 1 OS=Locusta migratoria GN... [more]
ARF1_DROME1.927e-3446.75ADP-ribosylation factor 1 OS=Drosophila melanogast... [more]
ARL5_CAEEL2.517e-3442.41ADP-ribosylation factor-like protein 5 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666528 ID=EY666528; Name=EY666528; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGGTCGTCAGCCGCACAAGAAATGGGGCTCCTCAGCATCAT
AAGGAAGATCAAGAAAAAAGAGAAGGAAATGCGCATTCTTATGGTGGGTC
TTGATAATTCTGGGAAGACCACAATTGTTTTGAAGATAAACGGAGAAGAT
ACTAGCGTTATCAGTCCTACACTTGGATTCAATATCAAAACCGTTACTTA
CCAAAAGTACACTTTAAACATATGGGATGTAGGAGGCCAAAGGACTATAA
GATCATATTGGAGGAACTACTTTGAGCAAACTGATGGTTTGGTGTGGGTG
GTTGATAGTTCCGATCTTAGAAGACTGGATGATTGCAAAATGGAACTAGA
CAATCTTTTAAAGGAAGAGAGGCTATCAGGGGCATCCTTACTGATTCTAG
CAAATAAGCAGGACATCAATGGTGCTCTTACCCCAACAGAGATTGCTAAA
GTTCTGAACTTGGAAGCCATGGACAAAACTCGACACTGGAAAATTGTGGG
TTGCAGTGCCTACACAGGTGAGGGACTGCTAGAGGGATTTGATTGGTTAG
TTCAGGACATTGCCTCCCGGATCTACCTTCTTGACTAACCCGTTGTTGTA
CAAGAAAAAATTCCTAAATTTGCCTTGTAATGTGAAAAAAGAGTGTGGGT
TATGGGACAAAACCATGTGAGATGTATGCCCATGTGATTGATTGGCTCAT
GAGCTGTATCTGGTGTACAAGAATGAAACCGTTGGGTAAAATGGGGTCCT
TTTTCAGCTGAAATGGTTGGCCAAAAACAAGAATATGACCAAATGGATTT
GAAAATAATTACTTTTTTCCCAAAAAAAAAAAAA
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