EY666528

Overview
NameEY666528
Unique NameEY666528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF1_SCHPO (ADP-ribosylation factor 1 OS=Schizosaccharomyces pombe GN=arf1 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.249e-33
Identity = 69/161 (42.86%), Postives = 102/161 (63.35%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+  +  +WDVGGQ  IR  WR+YF+ T G+++VVDS+D  R+ +   EL  +L E+ L  A LL+ ANKQD+  A+   EI   L L ++ + R W I    A +G+GL EG +WL  ++ ++
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRQWYIQATCATSGDGLYEGLEWLSTNLKNQ 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARD1_MOUSE (GTP-binding protein ARD-1 OS=Mus musculus GN=Trim23 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.131e-33
Identity = 70/158 (44.30%), Postives = 100/158 (63.29%), Query Frame = 1
Query:   94 VGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIAS 567
            +GLD +GKTTI+ K+  ++     PT+GFN++TV Y+     IWDVGG+  +R  W++Y+  T  +V+VVDSS   R+ +   EL  LL E+ L  A LLI ANKQD+ GAL+  EI ++L+L  +   R W I GC A +G GL EG DWL + + +
Sbjct:  410 LGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQLVA 567          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARD1_HUMAN (GTP-binding protein ARD-1 OS=Homo sapiens GN=TRIM23 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.131e-33
Identity = 70/158 (44.30%), Postives = 100/158 (63.29%), Query Frame = 1
Query:   94 VGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIAS 567
            +GLD +GKTTI+ K+  ++     PT+GFN++TV Y+     IWDVGG+  +R  W++Y+  T  +V+VVDSS   R+ +   EL  LL E+ L  A LLI ANKQD+ GAL+  EI ++L+L  +   R W I GC A +G GL EG DWL + + +
Sbjct:  410 LGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQLVA 567          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARL1_CAEEL (ADP-ribosylation factor-like protein 1 OS=Caenorhabditis elegans GN=arl-1 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.783e-33
Identity = 70/161 (43.48%), Postives = 102/161 (63.35%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            L++GLD +GKTTI+ ++   +     PT+GFN++ V Y+     +WD+GGQ +IR YWR Y+  TD +++VVDS+D  R+   + EL  +L+E+ L GA L +LANKQDI G LT TE+ K L L+A+ + R  +I   SA  GEGL    DWL   +  +
Sbjct:   20 LILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQELATMLQEDELQGAVLAVLANKQDIAGCLTETEVYKALGLDAL-RNRTIQIFKTSASKGEGLDPAMDWLANQLQQK 179          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF_ASHGO (ADP-ribosylation factor OS=Ashbya gossypii GN=ARF1 PE=3 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 3.634e-33
Identity = 67/161 (41.61%), Postives = 104/161 (64.60%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTT++ K+   +     PT+GFN++TV Y+  +  +WDVGGQ  IR  WR+YF  T+G+++VVDS+D  R+ + +  L  +L E+ +  A LL+ ANKQD+  A++  EI + L L ++ + R W I    A +GEGL EG +WL  ++ ++
Sbjct:   21 LMVGLDGAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFRNTEGIIFVVDSNDRSRIAEAREVLQRMLNEDEIRNAVLLVFANKQDLPEAMSAAEITEKLGLHSI-RQRPWYIQATCATSGEGLYEGLEWLSTNLKNQ 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF6_CHICK (ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 3.634e-33
Identity = 69/160 (43.12%), Postives = 101/160 (63.12%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIAS 567
            LM+GLD +GKTTI+ K+    +    PT+GFN++TVTY+    N+WDVGGQ  IR  WR+Y+  T GL++VVD +D  R+D+ + EL  ++ +  +  A +LI ANKQD+  A+ P EI + L L  + + R+W +    A TG+GL EG  WL  +  S
Sbjct:   17 LMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI-RDRNWYVQPSCATTGDGLYEGLTWLTSNYKS 175          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF5_RAT (ADP-ribosylation factor 5 OS=Rattus norvegicus GN=Arf5 PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.634e-33
Identity = 69/161 (42.86%), Postives = 102/161 (63.35%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+     +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ +   EL  +L+E+ L  A LL+ ANKQD+  A+  +E+   L L+ + ++R W +    A  G GL +G DWL  +++ R
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHL-RSRTWYVQATCATQGTGLYDGLDWLSHELSKR 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF5_MOUSE (ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.634e-33
Identity = 69/161 (42.86%), Postives = 102/161 (63.35%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+     +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ +   EL  +L+E+ L  A LL+ ANKQD+  A+  +E+   L L+ + ++R W +    A  G GL +G DWL  +++ R
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHL-RSRTWYVQATCATQGTGLYDGLDWLSHELSKR 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF5_HUMAN (ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.634e-33
Identity = 69/161 (42.86%), Postives = 102/161 (63.35%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+     +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ +   EL  +L+E+ L  A LL+ ANKQD+  A+  +E+   L L+ + ++R W +    A  G GL +G DWL  +++ R
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHL-RSRTWYVQATCATQGTGLYDGLDWLSHELSKR 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF1_YEAST (ADP-ribosylation factor 1 OS=Saccharomyces cerevisiae GN=ARF1 PE=1 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 6.199e-33
Identity = 66/154 (42.86%), Postives = 101/154 (65.58%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWL 549
            LMVGLD +GKTT++ K+   +     PT+GFN++TV Y+  +  +WDVGGQ  IRS WR+Y+  T+G+++VVDS+D  R+ + +  +  +L E+ L  A+ L+ ANKQD+  A++  EI + L L ++ + R W I    A +GEGL EG +WL
Sbjct:   21 LMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPEAMSAAEITEKLGLHSI-RNRPWFIQATCATSGEGLYEGLEWL 173          
The following BLAST results are available for this feature:
BLAST of EY666528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
ARF1_SCHPO1.249e-3342.86ADP-ribosylation factor 1 OS=Schizosaccharomyces p... [more]
ARD1_MOUSE2.131e-3344.30GTP-binding protein ARD-1 OS=Mus musculus GN=Trim2... [more]
ARD1_HUMAN2.131e-3344.30GTP-binding protein ARD-1 OS=Homo sapiens GN=TRIM2... [more]
ARL1_CAEEL2.783e-3343.48ADP-ribosylation factor-like protein 1 OS=Caenorha... [more]
ARF_ASHGO3.634e-3341.61ADP-ribosylation factor OS=Ashbya gossypii GN=ARF1... [more]
ARF6_CHICK3.634e-3343.13ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6... [more]
ARF5_RAT3.634e-3342.86ADP-ribosylation factor 5 OS=Rattus norvegicus GN=... [more]
ARF5_MOUSE3.634e-3342.86ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 ... [more]
ARF5_HUMAN3.634e-3342.86ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 ... [more]
ARF1_YEAST6.199e-3342.86ADP-ribosylation factor 1 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666528 ID=EY666528; Name=EY666528; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGGTCGTCAGCCGCACAAGAAATGGGGCTCCTCAGCATCAT
AAGGAAGATCAAGAAAAAAGAGAAGGAAATGCGCATTCTTATGGTGGGTC
TTGATAATTCTGGGAAGACCACAATTGTTTTGAAGATAAACGGAGAAGAT
ACTAGCGTTATCAGTCCTACACTTGGATTCAATATCAAAACCGTTACTTA
CCAAAAGTACACTTTAAACATATGGGATGTAGGAGGCCAAAGGACTATAA
GATCATATTGGAGGAACTACTTTGAGCAAACTGATGGTTTGGTGTGGGTG
GTTGATAGTTCCGATCTTAGAAGACTGGATGATTGCAAAATGGAACTAGA
CAATCTTTTAAAGGAAGAGAGGCTATCAGGGGCATCCTTACTGATTCTAG
CAAATAAGCAGGACATCAATGGTGCTCTTACCCCAACAGAGATTGCTAAA
GTTCTGAACTTGGAAGCCATGGACAAAACTCGACACTGGAAAATTGTGGG
TTGCAGTGCCTACACAGGTGAGGGACTGCTAGAGGGATTTGATTGGTTAG
TTCAGGACATTGCCTCCCGGATCTACCTTCTTGACTAACCCGTTGTTGTA
CAAGAAAAAATTCCTAAATTTGCCTTGTAATGTGAAAAAAGAGTGTGGGT
TATGGGACAAAACCATGTGAGATGTATGCCCATGTGATTGATTGGCTCAT
GAGCTGTATCTGGTGTACAAGAATGAAACCGTTGGGTAAAATGGGGTCCT
TTTTCAGCTGAAATGGTTGGCCAAAAACAAGAATATGACCAAATGGATTT
GAAAATAATTACTTTTTTCCCAAAAAAAAAAAAA
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