EY666528

Overview
NameEY666528
Unique NameEY666528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF6_RAT (ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.057e-32
Identity = 68/160 (42.50%), Postives = 101/160 (63.12%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIAS 567
            LM+GLD +GKTTI+ K+    +    PT+GFN++TVTY+    N+WDVGGQ  IR  WR+Y+  T GL++VVD +D  R+D+ + EL  ++ +  +  A +LI ANKQD+  A+ P EI + L L  + + R+W +    A +G+GL EG  WL  +  S
Sbjct:   17 LMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI-RDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 175          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF6_PIG (ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.057e-32
Identity = 68/160 (42.50%), Postives = 101/160 (63.12%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIAS 567
            LM+GLD +GKTTI+ K+    +    PT+GFN++TVTY+    N+WDVGGQ  IR  WR+Y+  T GL++VVD +D  R+D+ + EL  ++ +  +  A +LI ANKQD+  A+ P EI + L L  + + R+W +    A +G+GL EG  WL  +  S
Sbjct:   17 LMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI-RDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 175          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF6_MOUSE (ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.057e-32
Identity = 68/160 (42.50%), Postives = 101/160 (63.12%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIAS 567
            LM+GLD +GKTTI+ K+    +    PT+GFN++TVTY+    N+WDVGGQ  IR  WR+Y+  T GL++VVD +D  R+D+ + EL  ++ +  +  A +LI ANKQD+  A+ P EI + L L  + + R+W +    A +G+GL EG  WL  +  S
Sbjct:   17 LMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI-RDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 175          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF6_HUMAN (ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.057e-32
Identity = 68/160 (42.50%), Postives = 101/160 (63.12%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIAS 567
            LM+GLD +GKTTI+ K+    +    PT+GFN++TVTY+    N+WDVGGQ  IR  WR+Y+  T GL++VVD +D  R+D+ + EL  ++ +  +  A +LI ANKQD+  A+ P EI + L L  + + R+W +    A +G+GL EG  WL  +  S
Sbjct:   17 LMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI-RDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 175          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF4_RAT (ADP-ribosylation factor 4 OS=Rattus norvegicus GN=Arf4 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.057e-32
Identity = 69/161 (42.86%), Postives = 100/161 (62.11%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+     +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ +    L  +L E+ L  A LL+ ANKQD+  A+  +E+   L L+++ + R W +    A  G GL EG DWL  +++ R
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSL-RNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF4_MOUSE (ADP-ribosylation factor 4 OS=Mus musculus GN=Arf4 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.057e-32
Identity = 69/161 (42.86%), Postives = 100/161 (62.11%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+     +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ +    L  +L E+ L  A LL+ ANKQD+  A+  +E+   L L+++ + R W +    A  G GL EG DWL  +++ R
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSL-RNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF2_YEAST (ADP-ribosylation factor 2 OS=Saccharomyces cerevisiae GN=ARF2 PE=1 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 1.057e-32
Identity = 65/161 (40.37%), Postives = 104/161 (64.60%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTT++ K+   +     PT+GFN++TV Y+  +  +WDVGGQ  IRS WR+Y+  T+G+++V+DS+D  R+ + +  +  +L E+ L  A  L+ ANKQD+  A++  EI + L L ++ + R W I    A +GEGL EG +WL  ++ ++
Sbjct:   21 LMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVIDSNDRSRIGEAREVMQRMLNEDELRNAVWLVFANKQDLPEAMSAAEITEKLGLHSI-RNRPWFIQSTCATSGEGLYEGLEWLSNNLKNQ 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARD1_RAT (GTP-binding protein ARD-1 (Fragment) OS=Rattus norvegicus GN=Trim23 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.804e-32
Identity = 69/158 (43.67%), Postives = 99/158 (62.66%), Query Frame = 1
Query:   94 VGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIAS 567
            +GLD +GKTTI+ K+  ++     PT+GFN++TV Y+     IWDVG +  +R  W++Y+  T  +V+VVDSS   R+ +   EL  LL E+ L  A LLI ANKQD+ GAL+  EI ++L+L  +   R W I GC A +G GL EG DWL + + +
Sbjct:  390 LGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGEKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQLVA 547          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF4_PONAB (ADP-ribosylation factor 4 OS=Pongo abelii GN=ARF4 PE=2 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 3.077e-32
Identity = 68/161 (42.24%), Postives = 100/161 (62.11%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+     +WDVGGQ  IR  W++YF+ T GL++VVDS+D  R+ +   EL  +L  + L  A LL+ ANKQD+  A+  +E+   L L+++ + R W +    A  G GL EG DWL  +++ R
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSL-RNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF4_HUMAN (ADP-ribosylation factor 4 OS=Homo sapiens GN=ARF4 PE=1 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 3.077e-32
Identity = 68/161 (42.24%), Postives = 100/161 (62.11%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            LMVGLD +GKTTI+ K+   +     PT+GFN++TV Y+     +WDVGGQ  IR  W++YF+ T GL++VVDS+D  R+ +   EL  +L  + L  A LL+ ANKQD+  A+  +E+   L L+++ + R W +    A  G GL EG DWL  +++ R
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSL-RNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180          
The following BLAST results are available for this feature:
BLAST of EY666528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
ARF6_RAT1.057e-3242.50ADP-ribosylation factor 6 OS=Rattus norvegicus GN=... [more]
ARF6_PIG1.057e-3242.50ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE... [more]
ARF6_MOUSE1.057e-3242.50ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 ... [more]
ARF6_HUMAN1.057e-3242.50ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 ... [more]
ARF4_RAT1.057e-3242.86ADP-ribosylation factor 4 OS=Rattus norvegicus GN=... [more]
ARF4_MOUSE1.057e-3242.86ADP-ribosylation factor 4 OS=Mus musculus GN=Arf4 ... [more]
ARF2_YEAST1.057e-3240.37ADP-ribosylation factor 2 OS=Saccharomyces cerevis... [more]
ARD1_RAT1.804e-3243.67GTP-binding protein ARD-1 (Fragment) OS=Rattus nor... [more]
ARF4_PONAB3.077e-3242.24ADP-ribosylation factor 4 OS=Pongo abelii GN=ARF4 ... [more]
ARF4_HUMAN3.077e-3242.24ADP-ribosylation factor 4 OS=Homo sapiens GN=ARF4 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666528 ID=EY666528; Name=EY666528; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGGTCGTCAGCCGCACAAGAAATGGGGCTCCTCAGCATCAT
AAGGAAGATCAAGAAAAAAGAGAAGGAAATGCGCATTCTTATGGTGGGTC
TTGATAATTCTGGGAAGACCACAATTGTTTTGAAGATAAACGGAGAAGAT
ACTAGCGTTATCAGTCCTACACTTGGATTCAATATCAAAACCGTTACTTA
CCAAAAGTACACTTTAAACATATGGGATGTAGGAGGCCAAAGGACTATAA
GATCATATTGGAGGAACTACTTTGAGCAAACTGATGGTTTGGTGTGGGTG
GTTGATAGTTCCGATCTTAGAAGACTGGATGATTGCAAAATGGAACTAGA
CAATCTTTTAAAGGAAGAGAGGCTATCAGGGGCATCCTTACTGATTCTAG
CAAATAAGCAGGACATCAATGGTGCTCTTACCCCAACAGAGATTGCTAAA
GTTCTGAACTTGGAAGCCATGGACAAAACTCGACACTGGAAAATTGTGGG
TTGCAGTGCCTACACAGGTGAGGGACTGCTAGAGGGATTTGATTGGTTAG
TTCAGGACATTGCCTCCCGGATCTACCTTCTTGACTAACCCGTTGTTGTA
CAAGAAAAAATTCCTAAATTTGCCTTGTAATGTGAAAAAAGAGTGTGGGT
TATGGGACAAAACCATGTGAGATGTATGCCCATGTGATTGATTGGCTCAT
GAGCTGTATCTGGTGTACAAGAATGAAACCGTTGGGTAAAATGGGGTCCT
TTTTCAGCTGAAATGGTTGGCCAAAAACAAGAATATGACCAAATGGATTT
GAAAATAATTACTTTTTTCCCAAAAAAAAAAAAA
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