CN185160

Overview
NameCN185160
Unique NameCN185160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.091e-43
Identity = 88/156 (56.41%), Postives = 113/156 (72.44%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            K  KAFG KVTVISTS  K+ EA+  LG D F+VS+DP +++AA+GT+D IIDTVSA H + P               LP+KPL++P+F L+  RR + GS IGG+KETQEM+DF AK+NI AD+E++ +D INTA++RL KSDVKYRFVIDV  S
Sbjct:  201 KFAKAFGTKVTVISTSLSKKEEAMQHLGVDEFVVSTDPQQMQAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKS 356          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.310e-42
Identity = 85/156 (54.49%), Postives = 110/156 (70.51%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            KM KAFG +VTVI  S  K  EA+ KLGAD+FL++SD  ++K A  ++D IIDTV   H LAP                PEKP E+P+F+L+  R+L+GG+  GG+KETQEMLDF AKHNI AD+E++ MD +NTA+ERL KSDV+YRFVID+ N+
Sbjct:  201 KMAKAFGAQVTVIDISESKRKEALEKLGADSFLLNSDQEQMKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLLGGTINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANT 356          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.793e-41
Identity = 83/156 (53.21%), Postives = 114/156 (73.08%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            K  +AFG++VTVISTSP K  EA+ +LGAD F+VS++ +++KAAMGTM  II+T SA  S+                 LPEKPL++P FALVG  +++ GS +G + ETQEM+DF A+H +AADIEL+  D++NTA+ERLAK DV+YRFV+D+GN+
Sbjct:  220 KFARAFGMRVTVISTSPVKRQEALERLGADGFIVSTNASEMKAAMGTMHGIINTASASTSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVGGGKILAGSCMGSISETQEMIDFAAEHGVAADIELIGADEVNTAMERLAKGDVRYRFVVDIGNT 375          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.793e-41
Identity = 87/156 (55.77%), Postives = 112/156 (71.79%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            K  +AFGLKVTVIS+SP K+ EA+ +LGADAF+VSS   +++AA  TMD +I+TVSA   +AP               LPE PLEVP F+LV   R + GSNIGGM +TQEM++  AKH + ADIE++  D +NTA+ERLAK+DV+YRFVIDVGN+
Sbjct:  204 KFARAFGLKVTVISSSPGKKREALERLGADAFVVSSSAEEMEAARSTMDGVINTVSANTPMAPYLALLKPNGKMILVGLPENPLEVPPFSLVHGNRTLAGSNIGGMADTQEMIELAAKHGVTADIEVIGADDVNTAMERLAKADVRYRFVIDVGNT 359          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.128e-41
Identity = 83/156 (53.21%), Postives = 112/156 (71.79%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            K GKAFG+KVTVISTSP KE+EA+ +LGADAFL+S++  ++KAA GTMD IIDTVSAVH L P                P KP+++ ++ L    + V GS IGGM++TQEM+DF  +H +AA++E++ M+ +N A+ERL K DV+YRFVIDV N+
Sbjct:  202 KFGKAFGVKVTVISTSPWKEAEAVERLGADAFLLSTNAEQMKAAAGTMDGIIDTVSAVHDLTPLITLLRTHGQLVPVGSPGKPVQLALYPLQSDGKSVAGSMIGGMRDTQEMVDFAVEHGVAAEVEVIGMEDVNGAMERLQKGDVRYRFVIDVANT 357          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 1.061e-40
Identity = 88/159 (55.35%), Postives = 110/159 (69.18%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDV-GNSKL 789
            K GKAFGL VTVISTSP KE EA   L AD F+VS+D  +++A   ++DYIIDTV+A HSL P                PEKP+E+P F L+  +R V GS  GGMKETQEM+D C +HNI  DIE+V  D+IN A+ RLA++DV+YRFVI+V G+SKL
Sbjct:  202 KFGKAFGLHVTVISTSPAKEREARENLKADNFVVSTDQKQMQAMTRSLDYIIDTVAATHSLGPILELLKVNGKLVLVGAPEKPVELPSFPLIFGKRTVSGSMTGGMKETQEMMDICGEHNITCDIEIVSTDRINDALARLARNDVRYRFVINVGGDSKL 360          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.811e-40
Identity = 81/156 (51.92%), Postives = 110/156 (70.51%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            +  KAFG KVTV+S++  K  +A+  LGAD FLVS+D  ++KAAMGTMD IIDTVSA HS++P                 EKP ++  F+L+  R+ + GS IGGM+ETQEM+DF A+H I A+IE++ MD +NTA++RLAK DV+YRFVID+ N+
Sbjct:  202 RFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAMGTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNT 357          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.034e-40
Identity = 87/157 (55.41%), Postives = 110/157 (70.06%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPK-KESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            K  K  GLK+TVISTSP  K+ EAI  LGAD+FLVS DP +++A   T+D IIDTVSA HS+ P                 EKPLE+P F L+  R+LVGG+ +GG+KETQEM+DF  KHN+  +IE+V MD +N A++RLAK+DVKYRFVIDV N+
Sbjct:  202 KFAKTHGLKITVISTSPPTKKEEAIKNLGADSFLVSRDPDQMEAPKETLDGIIDTVSADHSIVPLIGLLKSHGKLVLIGAIEKPLELPPFPLILGRKLVGGTLVGGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANT 358          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.775e-38
Identity = 83/156 (53.21%), Postives = 110/156 (70.51%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            K  KAFG+ VTVIS+SP K  EA+ +LGADAF+VS +  ++ AA GTMD II+TVSA   +AP               LPEKP+E+P FALV + + + GS IGGM +T EM+D  AKH + A+IE++  D +NTA+ERLAK+DV+YRFVID+GN+
Sbjct:  194 KFAKAFGMTVTVISSSPGKRQEALERLGADAFVVSKNADEMNAATGTMDGIINTVSANIPIAPLLGLLKPNGKMILVGLPEKPMEIPPFALVASNKTLAGSCIGGMADT-EMIDLAAKHGVTAEIEVIGADYVNTAMERLAKADVRYRFVIDIGNT 348          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.435e-37
Identity = 78/158 (49.37%), Postives = 107/158 (67.72%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNSKL 789
            K  KAFG++VTVISTSP K  EA+  LGAD FLVS D  ++ AA GTMD I++TVSA H +AP                P +PLE+P +A+V   + + G+ +GG+++ Q MLDF  +H I A++E+++MD +NTA+ERL K+DV+YRFVIDV  S L
Sbjct:  271 KFAKAFGMRVTVISTSPGKRREALEHLGADEFLVSRDAGQMAAAAGTMDGILNTVSAWHPVAPLFALMKPMAQMVFVGAPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGSSL 428          
The following BLAST results are available for this feature:
BLAST of CN185160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
GEDH1_OCIBA5.091e-4356.41Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
MTDH_APIGR4.310e-4254.49Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH7_ORYSJ2.793e-4153.21Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CADH3_ORYSJ2.793e-4155.77Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CADH9_ORYSJ8.128e-4153.21Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH6_ORYSJ1.061e-4055.35Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CADH6_ARATH1.811e-4051.92Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
MTDH3_STYHU4.034e-4055.41Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CADH5_ORYSJ3.775e-3853.21Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
CAD8B_ORYSJ1.435e-3749.37Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006N21_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185160 ID=CN185160; Name=CN185160; organism=Citrus sinensis; type=EST; length=839bp
GAGGTGCTCACATTTTCCTCCAATATAAGACATTAGTATTTTGAAATACT
ATCCCAACAAAATATAAGTTAGCTAGATACTTTGAATGCAAAAAGGTGTA
GATAAATTGTGATGCCATATATAACCATTAAACAAGAAGATAACAATAGT
AGCAAGAACACGGACCAAATATATCCACACCCAGGGGTGGGGTGGGGATT
GTGTCCTGTCACTCCATCAAACACACATGGTAAGCAGGAAACTTGAGCTT
ATTCTAGCATCCAGGCTCAAAGTAAATGAGCATACAGCGGCGCGCACATC
ACAATGTACCTACTGCAATTTGGAGTTCCCCACGTCAATAACAAAACGGT
ACTTGACATCAGACTTTGCAAGCCTTTCTATGGCTGTGTTAATTTGGTCC
ATCCGGACCAGTTCAATGTCTGCAGCAATGTTGTGCTTGGCGCAAAAGTC
CAACATCTCTTGTGTCTCCTTCATTCCTCCAATGTTGCTTCCTCCAACAA
GCCTCCGAGCCCCAACTAAAGCAAAAATAGGCACCTCTAGGGGCTTCTCA
GGCAAGCCCACGGTGACCAGCTTTCCATTCACTTTCAGCAGACCAAGTAG
TGGTGCAAGGGAATGAACCGCTGACACAGTGTCAATAATGTAATCCATAG
TGCCCATAGCAGCCTTAACTTTAGCAGGATCACTGGAAACAAGGAATGCA
TCAGCACCAAGTTTGCTGATCGCTTCACTCTCTTTTTTCGGAGAAGTACT
GATGACGGTGACTTTCAACCCAAAGGCCTTGCCCATTTTCACAGCAACAT
GGCCAAGCCCACCAAGTCCTGCTACACCCAAATGCTTAC
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