CN185160

Overview
NameCN185160
Unique NameCN185160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.280e-32
Identity = 73/158 (46.20%), Postives = 101/158 (63.92%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNSKL 789
            K+ KA G  VTVIS+S KK +EA+  LGADA+LVSSD   +K A  ++DYI DT+  VH L P               +   PL+     ++  R+ + GS IG MKET+EML+FC +  + + IE+++MD +NTA+ERL K+DV+YRFV+DV  SKL
Sbjct:  198 KIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGSKL 355          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.280e-32
Identity = 73/158 (46.20%), Postives = 101/158 (63.92%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNSKL 789
            K+ KA G  VTVIS+S KK +EA+  LGADA+LVSSD   +K A  ++DYI DT+  VH L P               +   PL+     ++  R+ + GS IG MKET+EML+FC +  + + IE+++MD +NTA+ERL K+DV+YRFV+DV  SKL
Sbjct:  198 KIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGSKL 355          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.896e-32
Identity = 76/158 (48.10%), Postives = 100/158 (63.29%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNSKL 789
            K+ KA G  VTVIS+S KK  EA+  LGAD +LVSSD  K++ A  ++DYIIDTV   H L P               +   PL+     ++  R+ + GS IG MKET+EMLDFC +  + + IE+V+MD INTA+ERL K+DV+YRFV+DV  SKL
Sbjct:  198 KIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEASDSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVRYRFVVDVIGSKL 355          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.007e-32
Identity = 74/158 (46.84%), Postives = 101/158 (63.92%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNSKL 789
            K+ KA G  VTVIS+S KK +EA+  LGAD +LVSSD A+++ A  ++DYIIDTV   H L P               +   PL+     ++  R+ + GS IG MKE  EML+FC + ++++ IE+V+MD INTA ERL K+DV+YRFV+DV  SKL
Sbjct:  198 KIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVSSDAARMQEAADSLDYIIDTVPVFHPLEPYLSLLKIDGKLILMGVVNTPLQFVSPMVMLGRKSITGSFIGSMKELAEMLEFCKEKDLSSTIEIVKMDYINTAFERLEKNDVRYRFVVDVAGSKL 355          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.838e-31
Identity = 75/158 (47.47%), Postives = 98/158 (62.03%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNSKL 789
            K+ KA G  VTVIS+S KK  EA+  LGAD +LVSSD  K++ A  ++DYIIDTV   H L                 +   PL+     ++  R+ + GS IG MKET+EMLDFC +  + + IE+V+MD INTA+ERL K+DV YRFV+DV  SKL
Sbjct:  198 KIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEAADSLDYIIDTVPVGHPLELYLSLLKIDGKLILIGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVSYRFVVDVAGSKL 355          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.699e-30
Identity = 70/158 (44.30%), Postives = 99/158 (62.66%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNSKL 789
            K+ KA G  VTVIS+S KK  EA+  LGAD +++ SD AK+     ++DY+IDTV   H+L P               +   PL+     L+  R+++ GS IG MKET+EML+FC +  +++ IE+V+MD +NTA ERL K+DV+YRFV+DV  S L
Sbjct:  198 KIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSNL 355          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.218e-30
Identity = 73/160 (45.62%), Postives = 100/160 (62.50%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEV--PIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNSKL 789
            K+ KA G  VTVIS+S KK +EA+  LGADA+LVSSD   +K A  ++DY+ DT+  VH L P               +   PL+   P+  L      + GS IG MKET+EML+FC +  + + IE+++MD +NTA+ERL K+DV+YRFV+DV  SKL
Sbjct:  198 KIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYVFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLES----ITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGSKL 353          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.942e-30
Identity = 69/158 (43.67%), Postives = 99/158 (62.66%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNSKL 789
            K+ KA G  VTVIS+S KK+ EAI  LGAD ++VSSDPA+++    ++DYIIDTV   H L P               +   PL+     ++  R+++ GS IG +KET+E+L FC +  + + IE V++D++N A ERL K+DV+YRFV+DV  S L
Sbjct:  199 KIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISGSFIGSIKETEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGSNL 356          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.137e-29
Identity = 68/158 (43.04%), Postives = 99/158 (62.66%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNSKL 789
            K+ K+ G  VTVIS+S KK +EA+  LGAD +LVSSD A++ AAM ++DYIIDTV   H L P               +  +PL      ++  R+ + GS IG ++ET+E+L FC    + + IE+V+MD +N A+ERL ++DV+YRFV+DV  S +
Sbjct:  199 KVAKSMGHHVTVISSSDKKRAEAMDDLGADDYLVSSDEAQMAAAMDSLDYIIDTVPVKHPLEPYLALLKMDGKLVLMGVIGEPLSFVSPMVMLGRKTITGSFIGSIEETEEVLRFCVDKGLTSQIEVVKMDYLNQALERLERNDVRYRFVVDVAGSNI 356          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.217e-28
Identity = 68/158 (43.04%), Postives = 97/158 (61.39%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNSKL 789
            K+ K+ G  VTVIS+S +K  EA+  LGADA+LVSSD A + AA  ++DYIIDTV   H L P               +  +PL      ++  R+ + GS IG M ET+E+L+FC    + + IE+V+MD +N A+ERL ++DV+YRFV+DV  S +
Sbjct:  198 KVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAAAGDSLDYIIDTVPVHHPLEPYLALLKLDGKLILMGVINQPLSFISPMVMLGRKAITGSFIGSMAETEEVLNFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGSNI 355          
The following BLAST results are available for this feature:
BLAST of CN185160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CADH_EUCGL5.280e-3246.20Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU5.280e-3246.20Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH1_TOBAC6.896e-3248.10Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH1_OCIBA9.007e-3246.84Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH2_TOBAC5.838e-3147.47Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH5_ARATH1.699e-3044.30Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH1_EUCGU2.218e-3045.63Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH4_ARATH4.942e-3043.67Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH_LOLPR7.137e-2943.04Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH2_ORYSJ1.217e-2843.04Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006N21_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185160 ID=CN185160; Name=CN185160; organism=Citrus sinensis; type=EST; length=839bp
GAGGTGCTCACATTTTCCTCCAATATAAGACATTAGTATTTTGAAATACT
ATCCCAACAAAATATAAGTTAGCTAGATACTTTGAATGCAAAAAGGTGTA
GATAAATTGTGATGCCATATATAACCATTAAACAAGAAGATAACAATAGT
AGCAAGAACACGGACCAAATATATCCACACCCAGGGGTGGGGTGGGGATT
GTGTCCTGTCACTCCATCAAACACACATGGTAAGCAGGAAACTTGAGCTT
ATTCTAGCATCCAGGCTCAAAGTAAATGAGCATACAGCGGCGCGCACATC
ACAATGTACCTACTGCAATTTGGAGTTCCCCACGTCAATAACAAAACGGT
ACTTGACATCAGACTTTGCAAGCCTTTCTATGGCTGTGTTAATTTGGTCC
ATCCGGACCAGTTCAATGTCTGCAGCAATGTTGTGCTTGGCGCAAAAGTC
CAACATCTCTTGTGTCTCCTTCATTCCTCCAATGTTGCTTCCTCCAACAA
GCCTCCGAGCCCCAACTAAAGCAAAAATAGGCACCTCTAGGGGCTTCTCA
GGCAAGCCCACGGTGACCAGCTTTCCATTCACTTTCAGCAGACCAAGTAG
TGGTGCAAGGGAATGAACCGCTGACACAGTGTCAATAATGTAATCCATAG
TGCCCATAGCAGCCTTAACTTTAGCAGGATCACTGGAAACAAGGAATGCA
TCAGCACCAAGTTTGCTGATCGCTTCACTCTCTTTTTTCGGAGAAGTACT
GATGACGGTGACTTTCAACCCAAAGGCCTTGCCCATTTTCACAGCAACAT
GGCCAAGCCCACCAAGTCCTGCTACACCCAAATGCTTAC
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