DC887700
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_HOLOB (10 kDa chaperonin OS=Holospora obtusa GN=groS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.951e-13 Identity = 36/90 (40.00%), Postives = 58/90 (64.44%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +R+LV+++ +T+ GI++P+ + K G VIAVGPGARD +GN I + K+GD VL + G VKL +DY + ++ ++ GT+ Sbjct: 6 PLGDRILVKRVEAEERTSGGIVIPDTAKEKPIEGTVIAVGPGARDPQGNLIALEVKQGDRVLFGKWSGTEVKLSGEDYIVMKESDVFGTI 95
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_DESAH (10 kDa chaperonin OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=groS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.677e-13 Identity = 36/92 (39.13%), Postives = 55/92 (59.78%), Query Frame = -3 Query: 101 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 373 L P +R+LVE++ KT GI++P+ + K GKV+A G G ++G IP+ K GDT+L YGG VK+ DY + R +++LG + Sbjct: 3 LRPLQDRILVERVQETEKTKGGIIIPDTAKEKPAEGKVVASGNGRVGEDGKLIPMDLKVGDTILFSKYGGTEVKIDGTDYLIMRQDDVLGVI 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_DESOH (10 kDa chaperonin OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=groS PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 9.684e-13 Identity = 36/90 (40.00%), Postives = 58/90 (64.44%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +R+LV+++ +KT GI++P+ + K GKV+AVG G ++G IP+ K+GD VL YGG VK+ ++Y + R+++ILG L Sbjct: 5 PLHDRILVKRVEEETKTKGGIIIPDTAKEKPIEGKVMAVGNGRLGEDGKLIPLEVKKGDRVLFGKYGGTEVKMDGQEYLIMREDDILGIL 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_OPITP (10 kDa chaperonin OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.265e-12 Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = -3 Query: 101 RLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 376 ++ P +RVLV+ I + GI++P+ + K KVIA+G G + ++G P K GD VL+ YGG VKL EK Y L R+++ILG + Sbjct: 5 KIKPIGDRVLVQHIEEKEQVRGGIIIPDSAKEKPQEAKVIALGTGKKGEDGKVTPFEVKVGDRVLISKYGGTEVKLDEKKYTLVREDDILGVI 97
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_STACT (10 kDa chaperonin OS=Staphylococcus carnosus (strain TM300) GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.652e-12 Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = -3 Query: 110 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEIL 373 L P NRV+++++ T +GI+L EK+ K N GKVIAVGPG G + KEGDTV+ Y G V++GE Y + +EE+L Sbjct: 2 LKPLGNRVIIKRVESEQTTKSGIVLTEKAKEKSNEGKVIAVGPGRLLDNGERVTPEVKEGDTVVFEQYAGSEVQVGEDKYLVISEEEVL 90
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_GEOSF (10 kDa chaperonin OS=Geobacter sp. (strain FRC-32) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.157e-12 Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = -3 Query: 101 RLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 376 +L P +R++V+++ +KT GI +PE + K G+V+AVG G R ++G +P+ K GD VL Y G VK+ +DY + R+++ILG + Sbjct: 2 KLRPMQDRIIVKRVEEETKTAGGIYIPETAKEKPQEGEVVAVGNGKRTEDGKILPLDVKVGDKVLFGKYSGTEVKVEGQDYLIMREDDILGVI 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_DESPS (10 kDa chaperonin OS=Desulfotalea psychrophila GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.157e-12 Identity = 35/93 (37.63%), Postives = 57/93 (61.29%), Query Frame = -3 Query: 101 RLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 376 ++ P +R+LV+++ KT GI++P+ + K G+V+AVGPG G + + KEGD VL YGG VKL +D+ + R+++ILG + Sbjct: 2 KIRPLNDRLLVKRLAEEEKTAGGIIIPDSAKEKPAEGQVVAVGPGKVSDSGERVALQVKEGDLVLFSKYGGTDVKLDGEDFLIMREDDILGIM 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH102_RHOPA (10 kDa chaperonin 2 OS=Rhodopseudomonas palustris GN=groS2 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.157e-12 Identity = 34/92 (36.96%), Postives = 57/92 (61.96%), Query Frame = -3 Query: 95 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLHD 367 P +RV+V++I KT GI++P+ + K + G+++AVGPG RD+ G IP+ K GD VL + G VK+ K+ + ++ +I+G + D Sbjct: 5 PLHDRVVVKRIDAEEKTAGGIIIPDTAKEKPSQGEIVAVGPGGRDEAGKLIPIDLKVGDRVLFGKWSGTEVKIDGKELLIMKESDIMGVITD 96
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_SYNJB (10 kDa chaperonin OS=Synechococcus sp. GN=groS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.806e-12 Identity = 40/89 (44.94%), Postives = 51/89 (57.30%), Query Frame = -3 Query: 110 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEIL 373 L P +RVLV+ KT GI LP+ + K G+V+AVGPG R+ EG IP+ K GD VL Y G VKLG +Y L + +IL Sbjct: 11 LKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVKLGSDEYVLLAERDIL 99
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.806e-12 Identity = 40/89 (44.94%), Postives = 51/89 (57.30%), Query Frame = -3 Query: 110 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEIL 373 L P +RVLV+ KT GI LP+ + K G+V+AVGPG R+ EG IP+ K GD VL Y G VKLG +Y L + +IL Sbjct: 11 LKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSDEYVLLAERDIL 99 The following BLAST results are available for this feature:
BLAST of DC887700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887700 ID=DC887700; Name=DC887700; organism=Citrus sinensis; type=EST; length=450bpback to top |