DC887700
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH104_RHILO (10 kDa chaperonin 4 OS=Rhizobium loti GN=groS4 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 8.198e-12 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = -3 Query: 101 MAK-RLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 385 MAK + P +RV+V ++ SKT GI++P+ + K G++IAVG GARD+ G +P+ K GD +L + G VKL +D + ++ +I+G + Sbjct: 1 MAKSKFRPLHDRVVVRRVESESKTAGGIIIPDTAKEKPQEGEIIAVGSGARDESGKLVPLDVKAGDRILFGKWSGTEVKLNGEDLLIMKESDIMGII 97
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH105_RHILO (10 kDa chaperonin 5 OS=Rhizobium loti GN=groS5 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.071e-11 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = -3 Query: 101 MAK-RLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 385 MAK + P +RV+V ++ SKT GI++P+ + K G++IAVG GARD+ G +P+ K GD +L + G VKL +D + ++ +I+G + Sbjct: 1 MAKSKFRPLHDRVVVRRVESESKTAGGIIIPDTAKEKPQEGEIIAVGSGARDEAGKLVPLDVKAGDRILFGKWSGTEVKLNGEDLLIMKESDIMGII 97
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_PELUB (10 kDa chaperonin OS=Pelagibacter ubique GN=groS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 34/88 (38.64%), Postives = 54/88 (61.36%), Query Frame = -3 Query: 107 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILG 367 P +RVL+E + KT GI++P+ + K GKVIAVG GA+ ++G IP+ K GD VL + G +K+ K+Y + ++ +I+G Sbjct: 5 PLHDRVLIEVLDSSEKTAGGIIIPDTAQEKPQEGKVIAVGGGAKTEDGKLIPMDVKVGDKVLFGKWSGTEIKIDGKEYSIMKESDIMG 92
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH103_RHILO (10 kDa chaperonin 3 OS=Rhizobium loti GN=groS3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 34/92 (36.96%), Postives = 56/92 (60.87%), Query Frame = -3 Query: 101 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 373 L P +RV+V ++ SKT GI++P+ + K G++IAVG GARD+ G +P+ K GD +L + G VKL +D + ++ +I+G + Sbjct: 6 LRPLHDRVVVRRVESESKTAGGIIIPDTAKEKPQEGEIIAVGSGARDEAGKLVPLDVKAGDRILFGKWSGTEVKLNGEDLLIMKEADIMGII 97
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH103_BRAJA (10 kDa chaperonin 3 OS=Bradyrhizobium japonicum GN=groS3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 34/92 (36.96%), Postives = 55/92 (59.78%), Query Frame = -3 Query: 95 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLHD 367 P +RV+V++I KT GI++P+ + K + G+VIAVGPG D G IP+ + GD VL + G VK+ +D + ++ +++G L D Sbjct: 5 PLHDRVVVKRIDAEEKTAGGIIIPDTAKEKPSQGEVIAVGPGGHDDSGKLIPIDIEVGDRVLFGKWSGTEVKIDGQDLLIMKESDVMGVLTD 96
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_GEOSL (10 kDa chaperonin OS=Geobacter sulfurreducens GN=groS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.826e-11 Identity = 33/92 (35.87%), Postives = 57/92 (61.96%), Query Frame = -3 Query: 101 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 373 L P +R+LV++I +KT GI +P+ + K G+++AVG G + ++G IPV K GD VL Y G +K+ +++ + R+++ILG + Sbjct: 3 LRPLQDRILVKRIEEETKTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPVDLKVGDKVLFGKYAGTDIKIEGQEFLIMREDDILGVI 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_BRUSU (10 kDa chaperonin OS=Brucella suis GN=groS PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.826e-11 Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = -3 Query: 107 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILG 367 P +RV+V ++ +KT GI++P+ + K G+V+A G GARD+ G +P+ K GD VL + G VK+G +D + ++ +ILG Sbjct: 8 PLHDRVVVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILG 95
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_BRUSI (10 kDa chaperonin OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=groS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.826e-11 Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = -3 Query: 107 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILG 367 P +RV+V ++ +KT GI++P+ + K G+V+A G GARD+ G +P+ K GD VL + G VK+G +D + ++ +ILG Sbjct: 8 PLHDRVVVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILG 95
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_BRUO2 (10 kDa chaperonin OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=groS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.826e-11 Identity = 33/88 (37.50%), Postives = 53/88 (60.23%), Query Frame = -3 Query: 107 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILG 367 P RV+V ++ +KT GI++P+ + K G+V+A G GARD+ G +P+ K GD VL + G VK+G +D + ++ +ILG Sbjct: 8 PLHGRVIVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILG 95
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_BRUME (10 kDa chaperonin OS=Brucella melitensis GN=groS PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.826e-11 Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = -3 Query: 107 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILG 367 P +RV+V ++ +KT GI++P+ + K G+V+A G GARD+ G +P+ K GD VL + G VK+G +D + ++ +ILG Sbjct: 8 PLHDRVVVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILG 95 The following BLAST results are available for this feature:
BLAST of DC887700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887700 ID=DC887700; Name=DC887700; organism=Citrus sinensis; type=EST; length=450bpback to top |