DC887700
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_METSB (10 kDa chaperonin OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=groS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 33/90 (36.67%), Postives = 53/90 (58.89%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +RV+V+++ KT GI++P+ + K G++IAVGPG RD G P+ K GD VL + G VK+ +D + ++ +ILG + Sbjct: 5 PLHDRVVVKRLEGEEKTKGGIIIPDTAKEKPQEGEIIAVGPGGRDDSGKLTPLDVKAGDKVLFGKWSGTEVKIDGQDLLIMKESDILGVV 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_CUPTR (10 kDa chaperonin OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=groS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 33/93 (35.48%), Postives = 61/93 (65.59%), Query Frame = -3 Query: 98 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLH 373 L P +RV+V+++ +KT +GI++P+ ++ K + G+V+A+GPG +D +GN I + K GD VL Y G VK+ ++ + R+E+I+ ++ Sbjct: 3 LRPLHDRVIVKRLDNETKTASGIVIPDNAAEKPDQGEVLAIGPGKKDDKGNNIALDVKVGDRVLFGKYAGQGVKVDGQELLVMREEDIMAVVN 95
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_CAUCR (10 kDa chaperonin OS=Caulobacter crescentus GN=groS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 31/90 (34.44%), Postives = 57/90 (63.33%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +RVLV+++ +KT GI++P+ + K G+V+AVGPGAR+ +G+ + + K GD +L + G VK+ +D + ++ ++LG + Sbjct: 5 PLGDRVLVKRVEEETKTKGGIIIPDTAKEKPQEGEVVAVGPGARNDKGDVVALDVKAGDRILFGKWSGTEVKVDGQDLLIMKESDVLGVV 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_CAUCN (10 kDa chaperonin OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=groS PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 31/90 (34.44%), Postives = 57/90 (63.33%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +RVLV+++ +KT GI++P+ + K G+V+AVGPGAR+ +G+ + + K GD +L + G VK+ +D + ++ ++LG + Sbjct: 5 PLGDRVLVKRVEEETKTKGGIIIPDTAKEKPQEGEVVAVGPGARNDKGDVVALDVKAGDRILFGKWSGTEVKVDGQDLLIMKESDVLGVV 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH104_RHIME (10 kDa chaperonin 4 OS=Rhizobium meliloti GN=groS4 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 29/90 (32.22%), Postives = 54/90 (60.00%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +RV+V ++ KT G+++P+ + K G+++AVG GARD+ G +P+ K GD +L + G VK+ +D + ++ +I+G + Sbjct: 8 PLHDRVVVRRVESEEKTKGGVIIPDTAKEKPQEGEIVAVGSGARDESGKVVPLDVKAGDRILFGKWSGTEVKINGEDLLIMKEADIMGVI 97
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_RALEH (10 kDa chaperonin OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=groS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.314e-11 Identity = 33/93 (35.48%), Postives = 61/93 (65.59%), Query Frame = -3 Query: 98 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLH 373 L P +RV+V+++ +KT +GI++P+ ++ K + G+V+A+GPG +D +GN I + K GD VL Y G VK+ ++ + R+E+I+ ++ Sbjct: 3 LRPLHDRVIVKRLDNETKTASGIVIPDNAAEKPDQGEVLAIGPGKKDDKGNNIALDVKVGDRVLFGKYAGQAVKVEGQELLVMREEDIMAVVN 95
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_METRJ (10 kDa chaperonin OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=groS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.314e-11 Identity = 33/90 (36.67%), Postives = 54/90 (60.00%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +RV+V +I KT GI++P+ + K G+V+AVGPGARD++G + K GD VL + G VK+ +D + ++ +I+G + Sbjct: 5 PLHDRVVVRRIESEEKTKGGIIIPDTAKEKPQEGEVVAVGPGARDEQGRVNALDVKAGDRVLFGKWSGTEVKIDGQDLLIMKESDIMGVV 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_METI4 (10 kDa chaperonin OS=Methylacidiphilum infernorum (isolate V4) GN=groS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.314e-11 Identity = 34/93 (36.56%), Postives = 53/93 (56.99%), Query Frame = -3 Query: 101 RLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 376 ++ P RVLV+ I GI++P+ + K VIAVGPG D+ G IP+ K+GD VL+ YGG VK+ + + + R+++IL + Sbjct: 5 KIRPLGERVLVKLIEEQEVRKGGIIIPDTAKEKPQEATVIAVGPGKLDENGKRIPIEVKKGDKVLISKYGGTEVKIDGESFQILREDDILAII 97
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_GEOSM (10 kDa chaperonin OS=Geobacter sp. (strain M21) GN=groS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.314e-11 Identity = 33/92 (35.87%), Postives = 54/92 (58.70%), Query Frame = -3 Query: 101 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 373 L P +R++V+++ + T G+ +PE + K G+V+AVG G R +G P+ K GD VL Y G VKL +D+ + R+++ILG + Sbjct: 3 LRPLQDRIIVKRVEEATMTAGGLYIPETAKEKPQQGEVVAVGNGKRGDDGKVYPIDLKVGDKVLFGKYAGSEVKLEGEDFLIMREDDILGVV 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_GEOMG (10 kDa chaperonin OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=groS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.314e-11 Identity = 32/93 (34.41%), Postives = 56/93 (60.22%), Query Frame = -3 Query: 101 RLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 376 +L P +R+LV++I T GI +P+ + K G+++AVG G + ++G IP+ K GD VL Y G +K+ +D+ + R+++ILG + Sbjct: 2 KLRPLQDRILVKRIEEEQVTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPIDLKVGDKVLFGKYAGTDIKVEGEDFLIMREDDILGVI 94 The following BLAST results are available for this feature:
BLAST of DC887700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887700 ID=DC887700; Name=DC887700; organism=Citrus sinensis; type=EST; length=450bpback to top |