DC887700
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH101_RHILO (10 kDa chaperonin 1 OS=Rhizobium loti GN=groS1 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.314e-11 Identity = 31/90 (34.44%), Postives = 55/90 (61.11%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +RV++ + +K+ GI++P+ + K G+VIAVGPGARD+ G +P+ K GD +L + G VK+ +D + ++ +I+G + Sbjct: 5 PLHDRVVIRRAEGDTKSKGGIIIPDNAKEKPQEGEVIAVGPGARDENGALVPLDVKAGDLILFGKWSGTEVKIDGEDLLIMKEADIMGVI 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_RHOCS (10 kDa chaperonin OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=groS PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 6.940e-11 Identity = 34/93 (36.56%), Postives = 55/93 (59.14%), Query Frame = -3 Query: 101 RLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 376 R P +RV+V+++ KT GI++P+ + K G++IAVG GARD+ G I + K GD VL + G VK+ +Y + ++ +I+G L Sbjct: 2 RFRPLHDRVVVKRVESEQKTAGGIIIPDTAKEKPQEGEIIAVGSGARDESGKLIALDVKVGDRVLFGKWSGTEVKIDGVEYLIMKESDIMGVL 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_SYNY3 (10 kDa chaperonin OS=Synechocystis sp. (strain PCC 6803) GN=groS PE=1 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 9.064e-11 Identity = 37/90 (41.11%), Postives = 51/90 (56.67%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +RV V+ KT GILLP+ + K G+V+ VGPG R+ +G PV K GD VL Y G +KLG DY L +++IL ++ Sbjct: 13 PLGDRVFVKVSPAEEKTAGGILLPDNAKEKPQIGEVVQVGPGKRNDDGTYSPVEVKVGDKVLYSKYAGTDIKLGGDDYVLLTEKDILASV 102
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_RALSO (10 kDa chaperonin OS=Ralstonia solanacearum GN=groS PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.064e-11 Identity = 33/92 (35.87%), Postives = 60/92 (65.22%), Query Frame = -3 Query: 101 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 373 L P +RV+V+++ +KT +GI++P+ ++ K + G+V+A+GPG +D +GN I + K GD VL Y G VK+ ++ + R+E+I+ + Sbjct: 3 LRPLHDRVIVKRLDNETKTASGIVIPDAAAEKPDQGEVLAIGPGKKDDKGNPIALDVKVGDRVLFGKYAGQAVKVDGQELLVMREEDIMAVV 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_METPB (10 kDa chaperonin OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=groS PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.064e-11 Identity = 32/90 (35.56%), Postives = 54/90 (60.00%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +RV+V +I KT GI++P+ + K G+++AVGPGARD++G + K GD VL + G VK+ +D + ++ +I+G + Sbjct: 5 PLHDRVVVRRIESEEKTKGGIIIPDTAKEKPQEGEIVAVGPGARDEQGRVNALDVKVGDRVLFGKWSGTEVKIDGQDLLIMKESDIMGVV 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_DECAR (10 kDa chaperonin OS=Dechloromonas aromatica (strain RCB) GN=groS PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.064e-11 Identity = 34/90 (37.78%), Postives = 55/90 (61.11%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +RV+V+++ T +GI++P+ + K + G+V+AVGPG RD G I + K GD VL Y G VK+ ++ + R+E+I+G L Sbjct: 5 PLHDRVIVKRVEAERTTASGIVIPDSAGEKPDQGEVLAVGPGKRDDNGKQIALDVKVGDRVLFGKYAGQAVKVDGQEVLVMREEDIMGVL 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_CAUSK (10 kDa chaperonin OS=Caulobacter sp. (strain K31) GN=groS PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.064e-11 Identity = 31/88 (35.23%), Postives = 55/88 (62.50%), Query Frame = -3 Query: 107 PTLNRVLVEKIVPPSKTNAGILLPEK-SSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILG 367 P +RVLV+++ +KT GI++P+ K G+V+AVGPGAR+ +G+ + + K GD +L + G VK+ +D + ++ ++LG Sbjct: 5 PLGDRVLVKRVEEETKTKGGIIIPDTVKEKPQEGEVVAVGPGARNDKGDIVALDVKAGDRILFGKWSGTEVKVDGQDLLIMKESDVLG 92
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_BIFA0 (10 kDa chaperonin OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=groS PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.064e-11 Identity = 32/98 (32.65%), Postives = 58/98 (59.18%), Query Frame = -3 Query: 95 MAKRLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLHD 385 M+ L P ++++V++ ++T +G+++P+ + K G+V+AVGPG RD EG +P+ K GD VL YGG V ++Y + ++L ++D Sbjct: 1 MSFPLTPLEDKIIVKQAEAETQTASGLIIPDNAKEKPQQGEVLAVGPGRRDDEGKRVPMDVKVGDKVLYSKYGGTEVHFKGEEYLIVSARDLLAVVND 98 The following BLAST results are available for this feature:
BLAST of DC887700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887700 ID=DC887700; Name=DC887700; organism=Citrus sinensis; type=EST; length=450bpback to top |