CN185132

Overview
NameCN185132
Unique NameCN185132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: ITR1_SCHPO (Myo-inositol transporter 1 OS=Schizosaccharomyces pombe GN=itr1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.229e-20
Identity = 57/133 (42.86%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  305 YVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALV 703
            +V  LAF+AGIGGLLFGYDTGVISGAL+ I       +     +E I S               + D FGR+  I +A  +  VG+++   A +   +I GR  +G GVG+AS+  PLY+SE +P+KIRG LV
Sbjct:   86 WVWVLAFAAGIGGLLFGYDTGVISGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYLSEIAPSKIRGRLV 218          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: CSBC_BACSU (Probable metabolite transport protein csbC OS=Bacillus subtilis GN=csbC PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.606e-20
Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  323 FSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFL 721
            F   +GGLL+GYDTGVISGALL+I +D   +   TL +  +VSM +             +DR+GRR  + V   +F +GA+  A +   G LI  RV +GL VG ++   P+Y+SE +P KIRG L + N  +
Sbjct:   12 FFGALGGLLYGYDTGVISGALLFINND---IPLTTLTEGLVVSMLLLGAIFGSALSGTCSDRWGRRKVVFVLSIIFIIGALACAFSQTIGMLIASRVILGLAVGGSTALVPVYLSEMAPTKIRGTLGTMNNLM 141          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: GTR1_LEIDO (Membrane transporter D1 OS=Leishmania donovani PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.102e-20
Identity = 52/128 (40.62%), Postives = 76/128 (59.38%), Query Frame = 2
Query:  329 AGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTN 712
            A +GG LFGYDTGVI+ AL  ++D F      +     IV++A+           +++  FGRR  I VAD LF +G+V+M AAPN   ++  RV VGL +G++S T P+Y++E +  K RGA +  N
Sbjct:    9 AALGGFLFGYDTGVINAALFQMKDHF-GFSEHSWQYALIVAIAIAGAFVGAFISGFISAAFGRRPCIAVADALFVIGSVLMGAAPNVEVVLVSRVIVGLAIGISSATIPVYLAEVTSPKHRGATIVLN 135          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: ARAE_BACSU (Arabinose-proton symporter OS=Bacillus subtilis GN=araE PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19
Identity = 49/134 (36.57%), Postives = 81/134 (60.45%), Query Frame = 2
Query:  305 YVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVS 706
            +V+ ++ +AG+GGLL+GYDT VISGA+ +++D +        ++  ++S  +           +++DRFGRR  ++ A  LF + A++ A + +   LI  R+  GLG+GM S  S  YI+EA+P  IRG+L S
Sbjct:   22 FVILISCAAGLGGLLYGYDTAVISGAIGFLKDLYSL---SPFMEGLVISSIMIGGVVGVGISGFLSDRFGRRKILMTAALLFAISAIVSALSQDVSTLIIARIIGGLGIGMGSSLSVTYITEAAPPAIRGSLSS 152          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: YWTG_BACSU (Putative metabolite transport protein ywtG OS=Bacillus subtilis GN=ywtG PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.028e-19
Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 2
Query:  317 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTN 712
            L F   +GG L+GYDTGVISGA+L+++   K +      +  +VS  +            + DRFGR+ +I+ A  LF +G + +A APN G ++  R+ +GL VG ++   PLY+SE +P   RGAL S N
Sbjct:    9 LYFFGALGGALYGYDTGVISGAILFMK---KELGLNAFTEGLVVSSLLVGAILGSGAAGKLTDRFGRKKAIMAAALLFCIGGLGVALAPNTGVMVLFRIILGLAVGTSTTIVPLYLSELAPKHKRGALSSLN 137          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana GN=PLT6 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18
Identity = 50/136 (36.76%), Postives = 79/136 (58.09%), Query Frame = 2
Query:  299 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVS 706
            N + L+ A  A I  ++FGYDTGV+SGA+++I +D K+ D +  +   I+++               +D  GRR +I++A  LF +G+++M   PN   L++GR   GLGVG A M +P+Y +E + A  RG L S
Sbjct:   14 NRFALQCAIVASIVSIIFGYDTGVMSGAMVFIEEDLKTNDVQIEVLTGILNLCALVGSLLAGRT---SDIIGRRYTIVLASILFMLGSILMGWGPNYPVLLSGRCTAGLGVGFALMVAPVYSAEIATASHRGLLAS 146          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: ARAE_ECOLI (Arabinose-proton symporter OS=Escherichia coli (strain K12) GN=araE PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 50/130 (38.46%), Postives = 76/130 (58.46%), Query Frame = 2
Query:  317 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVS 706
            ++ +A + GLLFG D GVI+GAL +I D F    R   LQE +VS  +           W++ R GR+ S++    LF +G++  A A +   LI  RV +G+ VG+AS T+PLY+SE +   +RG ++S
Sbjct:   25 VSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSR---LQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMIS 151          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: ARAE_ECO57 (Arabinose-proton symporter OS=Escherichia coli O157:H7 GN=araE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 50/130 (38.46%), Postives = 76/130 (58.46%), Query Frame = 2
Query:  317 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVS 706
            ++ +A + GLLFG D GVI+GAL +I D F    R   LQE +VS  +           W++ R GR+ S++    LF +G++  A A +   LI  RV +G+ VG+AS T+PLY+SE +   +RG ++S
Sbjct:   25 VSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSR---LQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMIS 151          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: ARAE_KLEOX (Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18
Identity = 50/130 (38.46%), Postives = 76/130 (58.46%), Query Frame = 2
Query:  317 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVS 706
            ++ +A + GLLFG D GVI+GAL +I D F    R   LQE +VS  +           W++ R GR+ S++V   LF  G+V  A A +   L+  R+ +G+ VG+AS T+PLY+SE +   +RG ++S
Sbjct:   25 VSIAAAVAGLLFGLDIGVIAGALPFITDHFVLSSR---LQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMVGAVLFVAGSVGSAFATSVEMLLVARIVLGVAVGIASYTAPLYLSEMASENVRGKMIS 151          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 52/138 (37.68%), Postives = 77/138 (55.80%), Query Frame = 2
Query:  296 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKT-LLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVS 706
            +N Y    A  A +  +L GYD GV+SGA++YI+ D K  D +  +L  S+   ++           W+    GRR +I++A  +FF GA++M  +PN   L+ GR   G+GVG A M +P+Y +E SPA  RG L S
Sbjct:   32 RNNYAFACAILASMTSILLGYDIGVMSGAMIYIKRDLKINDLQIGILAGSLNIYSLIGSCAAGRTSDWI----GRRYTIVLAGAIFFAGAILMGLSPNYAFLMFGRFIAGIGVGYALMIAPVYTAEVSPASSRGFLNS 165          
The following BLAST results are available for this feature:
BLAST of CN185132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
ITR1_SCHPO1.229e-2042.86Myo-inositol transporter 1 OS=Schizosaccharomyces ... [more]
CSBC_BACSU1.606e-2040.60Probable metabolite transport protein csbC OS=Baci... [more]
GTR1_LEIDO6.102e-2040.63Membrane transporter D1 OS=Leishmania donovani PE=... [more]
ARAE_BACSU2.319e-1936.57Arabinose-proton symporter OS=Bacillus subtilis GN... [more]
YWTG_BACSU3.028e-1938.64Putative metabolite transport protein ywtG OS=Baci... [more]
PLT6_ARATH2.564e-1836.76Probable polyol transporter 6 OS=Arabidopsis thali... [more]
ARAE_ECOLI4.373e-1838.46Arabinose-proton symporter OS=Escherichia coli (st... [more]
ARAE_ECO574.373e-1838.46Arabinose-proton symporter OS=Escherichia coli O15... [more]
ARAE_KLEOX7.459e-1838.46Arabinose-proton symporter OS=Klebsiella oxytoca G... [more]
PLT5_ARATH9.742e-1837.68Polyol transporter 5 OS=Arabidopsis thaliana GN=PL... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006M24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006M24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185132 ID=CN185132; Name=CN185132; organism=Citrus sinensis; type=EST; length=722bp
GAGGCTTTCCTTCACTCACTTTCTTTCTCCCCCACCCCCAGTCCATTTTC
CCGGAAAATTTACTCACTATCACTATCATCATCATCACTCCCTTATATAG
TTATTTATAGTCCAAGTCCAACCACACCAAACCATTTTCTTGCCAAAATA
AAGAAAACAAACTCCTAAATTGTATATCTTTTAACAGATATTAATTTGTA
AAAAAAAAAAAAAAGGCCTGAAAATGGAGGGAGCAGTACATGGAGGAGGG
ACGACAGATGCGTCAGCGTTTCGAGAATGCTTCTCTTTGTCTTGGAAAAA
TCCCTACGTTCTTCGACTTGCTTTCTCTGCTGGAATTGGCGGCCTTCTCT
TTGGCTACGACACTGGAGTCATATCAGGCGCGCTACTTTATATCAGAGAT
GACTTCAAATCCGTCGATAGAAAGACTTTACTGCAGGAAAGCATAGTTAG
CATGGCTGTTGCTGGAGCAATCATTGGAGCTGCAATCGGTGGATGGATGA
ATGATCGCTTTGGAAGGAGAACTTCAATCCTTGTTGCAGATTTCCTGTTC
TTCGTTGGTGCTGTGATCATGGCTGCTGCTCCTAACCCTGGTGCCCTTAT
CACTGGACGAGTATTTGTAGGACTTGGTGTGGGAATGGCATCAATGACAT
CCCCGCTCTACATCTCTGAAGCTTCTCCAGCTAAAATTCGTGGTGCTCTT
GTTAGCACCAACGGCTTTCTTA
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