CN185132

Overview
NameCN185132
Unique NameCN185132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: XYLL1_ARATH (D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.003e-14
Identity = 44/137 (32.12%), Postives = 71/137 (51.82%), Query Frame = 2
Query:  335 IGGLLFGYDTGVISGALLYIRD---------DFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGF 718
            +G LLFGY+ G  S A++ ++          D  SVD   +   S+    +            + D  GRR  +++A FL+ VGA++   AP    LI GRV  G+G+G+    +P+YI+E +P++IRG ++S   F
Sbjct:   56 LGALLFGYEIGATSCAIMSLKSPTLSGISWYDLSSVDVGIITSGSLYGALIGSIVAFS-----VADIIGRRKELILAAFLYLVGAIVTVVAPVFSILIIGRVTYGMGIGLTMHAAPMYIAETAPSQIRGRMISLKEF 187          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.003e-14
Identity = 47/149 (31.54%), Postives = 73/149 (48.99%), Query Frame = 2
Query:  305 YVLRLAFSAGIGGLLFGYDTGVISGALL---YIRDDFKSVDRK--------------TLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGAL 700
            +V+     A +GGLLFGYD G+  G      ++   F  VD++                L +   S               +  ++GR+ S+ V    F +G++  A A N   LI GR+ +G+GVG A+ ++P+Y+SE +PAKIRGAL
Sbjct:   24 FVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLSKFFPEVDKQMHEARRETAYCKFDNQLLQLFTSSLYLAALASSFVASAVTRKYGRKISMFVGGVAFLIGSLFNAFATNVAMLIVGRLLLGVGVGFANQSTPVYLSEMAPAKIRGAL 172          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: YFIG_BACSU (Putative metabolite transport protein yfiG OS=Bacillus subtilis GN=yfiG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 2
Query:  338 GGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTN 712
            GGLLFGYDTGVI+GAL ++    + ++   + +  + S  +            ++DR GRR +IL    LF    +    +PN   +I  R  +GL VG AS+T P +++E SPA+ RG +V+ N
Sbjct:   31 GGLLFGYDTGVINGALPFMATAGQ-LNLTPVTEGLVASSLLLGAAFGAMFGGRLSDRHGRRKTILYLALLFIAATLGCTFSPNASVMIAFRFLLGLAVGCASVTVPTFLAEISPAERRGRIVTQN 154          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: GTR12_XENLA (Solute carrier family 2, facilitated glucose transporter member 12 OS=Xenopus laevis GN=slc2a12 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 43/136 (31.62%), Postives = 75/136 (55.15%), Query Frame = 2
Query:  305 YVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTN 712
            +++  +  A I GLL GY+ G+ISGALL ++   +   ++   QE +VS  +            + D +GRRT+I+    L     ++     + G+LI GR+F+G+ + ++++ + +YI+E SP   RG LVS N
Sbjct:   33 FIILSSVIAAISGLLVGYELGIISGALLQLQSLLELTCQQ---QEIVVSALLIGALVASLVGGCLIDLYGRRTTIIFTSILLVFANLLPVVVVSYGSLIAGRIFIGVSISLSAIATCVYIAELSPQDKRGMLVSLN 165          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: GTR10_XENTR (Solute carrier family 2, facilitated glucose transporter member 10 OS=Xenopus tropicalis GN=slc2a10 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = 2
Query:  299 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLL-QESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVS 706
            +P ++  A  + +GG++FGY+ G+ISGALL +    K+V + T   QE++VS  +            + DR+GRRT+IL ++ +   G++I+ A      LI GRV +G  + ++SM   +Y+SE      RG LVS
Sbjct:    5 SPTLILAATVSLLGGIVFGYELGIISGALLVL----KTVYQLTCFEQEALVSAVLFGALLASLIGGIIIDRWGRRTAILASNLVVLAGSIILIATSTFWWLIVGRVTIGFAISISSMACCIYVSEIVRPHQRGMLVS 137          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: STC_RICCO (Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.534e-14
Identity = 51/149 (34.23%), Postives = 69/149 (46.31%), Query Frame = 2
Query:  305 YVLRLAFSAGIGGLLFGYDTGVISGALL---YIRDDFKSVDRKTLLQES--------------IVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGAL 700
            YV      A +GGL+FGYD G+  G      +++  F SV RK    ES                S               +  +FGR+ S+L    LF  GA+I  AA     LI GR+ +G G+G A+ + PLY+SE +P K RGAL
Sbjct:   24 YVTVTCVVAAMGGLIFGYDIGISGGVTSMDSFLKKFFPSVYRKKKADESSNQYCQYDSQTLTMFTSSLYLAALIASLVASTITRKFGRKLSMLFGGVLFCAGAIINGAAKAVWMLILGRILLGFGIGFANQSVPLYLSEMAPYKYRGAL 172          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: RCO3_NEUCR (Probable glucose transporter rco-3 OS=Neurospora crassa GN=rco-3 PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13
Identity = 53/161 (32.92%), Postives = 79/161 (49.07%), Query Frame = 2
Query:  281 FSLSWKNPY--------VLRLAFSAGIGGLLFGYDTGVISG--ALLYIRDDFKS--VDRK----TLLQES--IVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVST 709
            F++ W+ P          + +      GGLL GYDTG I+G  A+   +D F +  +D         +ES  IV+M              + D +GRR S++ A  +F +GA++   A N   L+ GR   G+G+G+ S+  PLY SE +P  IRG LV T
Sbjct:    4 FAMGWQKPDNVAGSSAPAIMVGLFVATGGLLLGYDTGTINGILAMKSFKDHFSTGYIDGNGQPGIYPKESALIVAMLSAGTAIGALLAAPLGDHYGRRRSLIGAIGIFVIGAILQVCAYNIDLLVAGRTVAGVGIGIVSVLVPLYQSEMAPKWIRGTLVCT 164          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: MSSP1_ARATH (Monosaccharide-sensing protein 1 OS=Arabidopsis thaliana GN=MSSP1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.456e-13
Identity = 45/135 (33.33%), Postives = 74/135 (54.81%), Query Frame = 2
Query:  317 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFL 721
            +A +A IG  L G+D   I+GA++YI  D   ++  T +Q  +V+M++            ++D  GRR  ++++  ++FV  +IM  +PN   L   R+  G G G+A    P+YISE +P +IRG L +   FL
Sbjct:    7 VALAATIGNFLQGWDNATIAGAMVYINKD---LNLPTSVQGLVVAMSLIGATVITTCSGPISDWLGRRPMLILSSVMYFVCGLIMLWSPNVYVLCFARLLNGFGAGLAVTLVPVYISETAPPEIRGQLNTLPQFL 138          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: STP2_ARATH (Sugar transport protein 2 OS=Arabidopsis thaliana GN=STP2 PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13
Identity = 45/140 (32.14%), Postives = 68/140 (48.57%), Query Frame = 2
Query:  329 AGIGGLLFGYDTGVISGAL---LYIRDDFKSVDRKT-------------LLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGAL 700
            A +GGL+FGYD G+  G      ++ D F  V  K               L +   S              +++  FGR+ +I++A   F VGA++  +A   G LI GR+ +G G+G  + T PL+ISE +PA+ RG L
Sbjct:   30 AAVGGLMFGYDIGISGGVTSMDTFLLDFFPHVYEKKHRVHENNYCKFDDQLLQLFTSSLYLAGIFASFISSYVSRAFGRKPTIMLASIFFLVGAILNLSAQELGMLIGGRILLGFGIGFGNQTVPLFISEIAPARYRGGL 169          
BLAST of CN185132 vs. ExPASy Swiss-Prot
Match: STP11_ARATH (Sugar transport protein 11 OS=Arabidopsis thaliana GN=STP11 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.483e-13
Identity = 50/154 (32.47%), Postives = 74/154 (48.05%), Query Frame = 2
Query:  305 YVLRLAFSAGIGGLLFGYDTGVISGALL-------YIRDDFKSVDRK---------------TLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGAL 700
            +V+     A +GGLLFGYD G+  G +        +  D  + +  K               TL   S+   A+            +   FGR+ S+++    F  GA++   A N   LI GR+F+G+GVG A+ + PLY+SE +PAKIRGAL
Sbjct:   23 FVMITCIVAAMGGLLFGYDIGISGGVISMEDFLTKFFPDVLRQMQNKRGRETEYCKYDNELLTLFTSSLYLAALFASFLAST----ITRLFGRKVSMVIGSLAFLSGALLNGLAINLEMLIIGRLFLGVGVGFANQSVPLYLSEMAPAKIRGAL 172          
The following BLAST results are available for this feature:
BLAST of CN185132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
XYLL1_ARATH5.003e-1432.12D-xylose-proton symporter-like 1 OS=Arabidopsis th... [more]
STP9_ARATH5.003e-1431.54Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]
YFIG_BACSU6.534e-1436.00Putative metabolite transport protein yfiG OS=Baci... [more]
GTR12_XENLA6.534e-1431.62Solute carrier family 2, facilitated glucose trans... [more]
GTR10_XENTR6.534e-1435.04Solute carrier family 2, facilitated glucose trans... [more]
STC_RICCO8.534e-1434.23Sugar carrier protein C OS=Ricinus communis GN=STC... [more]
RCO3_NEUCR1.115e-1332.92Probable glucose transporter rco-3 OS=Neurospora c... [more]
MSSP1_ARATH1.456e-1333.33Monosaccharide-sensing protein 1 OS=Arabidopsis th... [more]
STP2_ARATH1.901e-1332.14Sugar transport protein 2 OS=Arabidopsis thaliana ... [more]
STP11_ARATH2.483e-1332.47Sugar transport protein 11 OS=Arabidopsis thaliana... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0006M24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006M24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185132 ID=CN185132; Name=CN185132; organism=Citrus sinensis; type=EST; length=722bp
GAGGCTTTCCTTCACTCACTTTCTTTCTCCCCCACCCCCAGTCCATTTTC
CCGGAAAATTTACTCACTATCACTATCATCATCATCACTCCCTTATATAG
TTATTTATAGTCCAAGTCCAACCACACCAAACCATTTTCTTGCCAAAATA
AAGAAAACAAACTCCTAAATTGTATATCTTTTAACAGATATTAATTTGTA
AAAAAAAAAAAAAAGGCCTGAAAATGGAGGGAGCAGTACATGGAGGAGGG
ACGACAGATGCGTCAGCGTTTCGAGAATGCTTCTCTTTGTCTTGGAAAAA
TCCCTACGTTCTTCGACTTGCTTTCTCTGCTGGAATTGGCGGCCTTCTCT
TTGGCTACGACACTGGAGTCATATCAGGCGCGCTACTTTATATCAGAGAT
GACTTCAAATCCGTCGATAGAAAGACTTTACTGCAGGAAAGCATAGTTAG
CATGGCTGTTGCTGGAGCAATCATTGGAGCTGCAATCGGTGGATGGATGA
ATGATCGCTTTGGAAGGAGAACTTCAATCCTTGTTGCAGATTTCCTGTTC
TTCGTTGGTGCTGTGATCATGGCTGCTGCTCCTAACCCTGGTGCCCTTAT
CACTGGACGAGTATTTGTAGGACTTGGTGTGGGAATGGCATCAATGACAT
CCCCGCTCTACATCTCTGAAGCTTCTCCAGCTAAAATTCGTGGTGCTCTT
GTTAGCACCAACGGCTTTCTTA
back to top