DC887687

Overview
NameDC887687
Unique NameDC887687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_DROSI (Triosephosphate isomerase OS=Drosophila simulans GN=Tpi PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.941e-48
Identity = 92/145 (63.45%), Postives = 113/145 (77.93%), Query Frame = -1
Query:  207 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 641
            E +  + +K  +AL++GLKVIAC+GETLE+REAG T EVVA Q  A A ++  W N+V+AYEPVWAIGTGK ATP QAQEVH  LR+WL  N S E++A+ RI YGGSV  AN KELA +PD+DGFLVGGASLKPEF+DII + +
Sbjct:  103 ESDALIAEKAEHALAEGLKVIACIGETLEEREAGKTNEVVARQMCAYAQKIKDWKNVVVAYEPVWAIGTGKTATPDQAQEVHAFLRQWLSDNISKEVSASLRIQYGGSVTAANAKELAKKPDIDGFLVGGASLKPEFVDIINARQ 247          
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.323e-48
Identity = 93/148 (62.84%), Postives = 112/148 (75.68%), Query Frame = -1
Query:  201 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAELK 641
            E +EF+G K AYALSQ LKV+AC+GE LE+REAG T +V   Q KA AD ++ W+N+V+AYEPVWAIGTGKVA+P QAQEVH  +R WL  N S ++A+  RIIYGGSVN ANC ELA + D+DGFLVGGASLK P+F  I  S   K
Sbjct:  147 EDDEFIGKKAAYALSQNLKVMACIGELLEEREAGKTFDVCFKQMKAFADNITDWTNVVIAYEPVWAIGTGKVASPEQAQEVHAAVRDWLKTNVSADVASTVRIIYGGSVNAANCAELAKKEDIDGFLVGGASLKGPDFATICNSVTSK 294          
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.323e-48
Identity = 95/148 (64.19%), Postives = 113/148 (76.35%), Query Frame = -1
Query:  201 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAELK 641
            E ++F+G K AYAL++GL VIAC+GE LE+REAG T +V   Q KA AD V SW NIV+AYEPVWAIGTGKVA+P QAQEVH  +R+WL  N S E+A+ TRIIYGGSVNG N  ELA + D+DGFLVGGASLK PEF  I+ +   K
Sbjct:  163 EDDQFIGKKAAYALNEGLGVIACIGEKLEEREAGKTFDVCYEQLKAFADAVPSWENIVVAYEPVWAIGTGKVASPQQAQEVHVAVREWLKKNVSAEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGASLKGPEFATIVNAVTSK 310          
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_DROME (Triosephosphate isomerase OS=Drosophila melanogaster GN=Tpi PE=1 SV=3)

HSP 1 Score: 190.66 bits (483), Expect = 5.647e-48
Identity = 91/145 (62.76%), Postives = 113/145 (77.93%), Query Frame = -1
Query:  207 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 641
            E +  + +K  +AL++GLKVIAC+GETLE+REAG T EVVA Q  A A ++  W N+V+AYEPVWAIGTG+ ATP QAQEVH  LR+WL  N S E++A+ RI YGGSV  AN KELA +PD+DGFLVGGASLKPEF+DII + +
Sbjct:  103 ESDALIAEKAEHALAEGLKVIACIGETLEEREAGKTNEVVARQMCAYAQKIKDWKNVVVAYEPVWAIGTGQTATPDQAQEVHAFLRQWLSDNISKEVSASLRIQYGGSVTAANAKELAKKPDIDGFLVGGASLKPEFVDIINARQ 247          
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_LATCH (Triosephosphate isomerase OS=Latimeria chalumnae PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.258e-47
Identity = 90/139 (64.75%), Postives = 111/139 (79.86%), Query Frame = -1
Query:  225 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFID 641
            E +E +G KV++ALS+GL V+AC+GE L++REAG T  VV   T+ IAD V  WS +VLAYEPVWAIGTGK A+P Q+QE+H +LRKWL  N S  +A + RIIYGGSV GA CKELA++PDVDGFLVGGASLKPEF++
Sbjct:  103 ESDELIGQKVSHALSEGLGVVACIGEKLDEREAGITEGVVFEVTEVIADDVKDWSKVVLAYEPVWAIGTGKTASPQQSQELHGKLRKWLKENVSETVADSVRIIYGGSVTGATCKELASEPDVDGFLVGGASLKPEFVE 241          
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_SCHPO (Triosephosphate isomerase OS=Schizosaccharomyces pombe GN=tpi1 PE=1 SV=4)

HSP 1 Score: 187.193 bits (474), Expect = 6.243e-47
Identity = 89/141 (63.12%), Postives = 104/141 (73.76%), Query Frame = -1
Query:  219 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDII 641
            E +EFV DK  +AL QGL V+AC+GETL +REA  T+ VV  Q  AIAD+V +WS IV+AYEPVWAIGTGK ATP QAQEVH E+RKW        +A   R+IYGGSVNG NCKE     D+DGFLVGGASLKPEF +I+
Sbjct:  104 ESDEFVADKTKFALEQGLTVVACIGETLAEREANETINVVVRQLNAIADKVQNWSKIVIAYEPVWAIGTGKTATPEQAQEVHAEIRKWATNKLGASVAEGLRVIYGGSVNGGNCKEFLKFHDIDGFLVGGASLKPEFHNIV 244          
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_SCHJA (Triosephosphate isomerase OS=Schistosoma japonicum GN=TPI PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.243e-47
Identity = 93/149 (62.42%), Postives = 111/149 (74.50%), Query Frame = -1
Query:  207 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS---WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 644
            NE +E V +KV +AL++GL V+AC+GETL +RE+G T EV   Q  AIA+++ S   W  +V+AYEPVWAIGTGKVA+P QAQEVH  LRKW   NT   +    RIIYGGSV  ANCKELA Q DVDGFLVGGASLKPEFIDI K+ +
Sbjct:  104 NESDELVAEKVQHALAEGLSVVACIGETLSERESGKTEEVCVRQLNAIANKIKSIDEWKRVVVAYEPVWAIGTGKVASPGQAQEVHNFLRKWFKTNTPSGVDQQIRIIYGGSVTAANCKELAQQHDVDGFLVGGASLKPEFIDICKARQ 252          
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_BOMMO (Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 1.816e-46
Identity = 92/144 (63.89%), Postives = 109/144 (75.69%), Query Frame = -1
Query:  213 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS-WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 641
            E +E V +KVA+AL  GLKVIAC+GETLE+RE+G T EVV  Q KA+   +   W NIVLAYEPVWAIGTGK ATP QAQ+VH  LR WL AN S  ++ A RI YGGSV  AN KELA+  D+DGFLVGGASLKPEF++I+ +
Sbjct:  103 EKDELVAEKVAHALESGLKVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASLKPEFVEIVNA 246          
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.902e-46
Identity = 97/149 (65.10%), Postives = 108/149 (72.48%), Query Frame = -1
Query:  201 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAELK 641
            E NEFVG K AYA S+GL VIAC+GE LE+REAG T +V   Q K+ A      W N+V+AYEPVWAIGTGKVA+P QAQEVH  +R WL  N S E+A+ TRIIYGGSVNG N   LAAQ DVDGFLVGGASLK PEF  II S   K
Sbjct:  105 ESNEFVGKKAAYAQSEGLGVIACIGELLEEREAGKTFDVCFKQLKSFARFPAKPWDNVVVAYEPVWAIGTGKVASPEQAQEVHVAVRDWLKTNVSEEVASKTRIIYGGSVNGGNSLALAAQEDVDGFLVGGASLKGPEFATIINSVTAK 253          
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_PARBA (Triosephosphate isomerase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=TPI1 PE=1 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 4.474e-45
Identity = 89/145 (61.38%), Postives = 109/145 (75.17%), Query Frame = -1
Query:  213 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 641
            E +EFV  K   A++ GL VI C+GE+LE+REAG T++VV  Q  A+A+ VS   W+ +V+AYEP+WAIGTGKVAT  QAQEVH  +RKWL    SPE A   R+IYGGSV   NC++LAAQPDVDGFLVGGASLKP F+DII +
Sbjct:  103 EDDEFVARKTKAAINGGLNVILCIGESLEEREAGKTIDVVTRQLDAVAEEVSPAEWNKVVIAYEPIWAIGTGKVATTEQAQEVHASIRKWLNEKISPEAAENIRVIYGGSVTENNCRDLAAQPDVDGFLVGGASLKPAFVDIINA 247          
The following BLAST results are available for this feature:
BLAST of DC887687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_DROSI1.941e-4863.45Triosephosphate isomerase OS=Drosophila simulans G... [more]
TPIC_SECCE4.323e-4862.84Triosephosphate isomerase, chloroplastic OS=Secale... [more]
TPIC_FRAAN4.323e-4864.19Triosephosphate isomerase, chloroplastic OS=Fragar... [more]
TPIS_DROME5.647e-4862.76Triosephosphate isomerase OS=Drosophila melanogast... [more]
TPIS_LATCH1.258e-4764.75Triosephosphate isomerase OS=Latimeria chalumnae P... [more]
TPIS_SCHPO6.243e-4763.12Triosephosphate isomerase OS=Schizosaccharomyces p... [more]
TPIS_SCHJA6.243e-4762.42Triosephosphate isomerase OS=Schistosoma japonicum... [more]
TPIS_BOMMO1.816e-4663.89Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE... [more]
TPIS_STELP6.902e-4665.10Triosephosphate isomerase, cytosolic OS=Stellaria ... [more]
TPIS_PARBA4.474e-4561.38Triosephosphate isomerase OS=Paracoccidioides bras... [more]

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Properties
Property NameValue
Genbank descriptionDC887687 EIC Citrus sinensis cDNA clone EIC0735 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887687 ID=DC887687; Name=DC887687; organism=Citrus sinensis; type=EST; length=644bp
GGTAAACACTACATAAGACTTATTCAACTCCAGCACTTAGGAAACAAAGA
TAATTAAAAAAGTTTAAAAAAAGGTTTCAGTTGGTCGCGCTTATCAAAAA
CAAAAGTAATTCTGAAATTATACCAAACGTATTCTATATATCCACAAACA
GTAAATACTTCATCAGCAAACTGCGCTTGAAATAAAGCTCAAGAATTTTA
CTTCAGCTCAGCAGATTTGATGATGTCAATGAACTCCGGCTTCAACGAAG
CACCACCAACCAAAAATCCGTCAACATCAGGCTGTGCAGCCAATTCCTTG
CAGTTTGCACCATTTACGGATCCTCCGTAGATGATCCGTGTTGCTGCAGC
AATTTCAGGACTGGTGTTTGCAAGAAGCCATTTCCTCAGTTCAAAATGTA
CTTCTTGAGCCTGCGCTGGAGTGGCAACCTTCCCAGTTCCAATAGCCCAC
ACAGGTTCATAGGCCAAAACAATGTTTGACCAGCTTGAGACTCGATCTGC
GATTGCTTTAGTTTGTGCAGCAACAACTTCCATAGTAGATCCTGCTTCAC
GCTGCTCAAGTGTCTCACCAACACAAGCAATCACCTTCAAACCTTGAGAA
AGTGCATATGCAACCTTATCCCCAACAAACTCATTTAATTCATT
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