DC887687

Overview
NameDC887687
Unique NameDC887687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_STRPC (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=tpiA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.822e-23
Identity = 62/139 (44.60%), Postives = 83/139 (59.71%), Query Frame = -1 
Query:  234 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 644
            +E +E +  K     + GL  I C GE+LE  EAG  +E V AQ  A    +S+   +++VLAYEP+WAIGTGK AT   AQ +   +R  + A+   E+A   R+ YGGSV   N K+  A PDVDG LVGGASL+ +
Sbjct:  104 HETDEDINKKAKAIFANGLTPIVCCGESLETYEAGKAVEFVGAQVSAALAGLSAEQVASLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEAD 242
[Close]
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_STRPB (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=tpiA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.822e-23
Identity = 62/139 (44.60%), Postives = 83/139 (59.71%), Query Frame = -1 
Query:  234 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 644
            +E +E +  K     + GL  I C GE+LE  EAG  +E V AQ  A    +S+   +++VLAYEP+WAIGTGK AT   AQ +   +R  + A+   E+A   R+ YGGSV   N K+  A PDVDG LVGGASL+ +
Sbjct:  104 HETDEDINKKAKAIFANGLTPIVCCGESLETYEAGKAVEFVGAQVSAALAGLSAEQVASLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEAD 242
[Close]
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_STRP3 (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M3 GN=tpiA PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 2.822e-23
Identity = 62/139 (44.60%), Postives = 83/139 (59.71%), Query Frame = -1 
Query:  234 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 644
            +E +E +  K     + GL  I C GE+LE  EAG  +E V AQ  A    +S+   +++VLAYEP+WAIGTGK AT   AQ +   +R  + A+   E+A   R+ YGGSV   N K+  A PDVDG LVGGASL+ +
Sbjct:  104 HETDEDINKKAKAIFANGLTPIVCCGESLETYEAGKAVEFVGAQVSAALAGLSAEQVASLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEAD 242
[Close]
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_STRP1 (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M1 GN=tpiA PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 2.822e-23
Identity = 62/139 (44.60%), Postives = 83/139 (59.71%), Query Frame = -1 
Query:  234 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 644
            +E +E +  K     + GL  I C GE+LE  EAG  +E V AQ  A    +S+   +++VLAYEP+WAIGTGK AT   AQ +   +R  + A+   E+A   R+ YGGSV   N K+  A PDVDG LVGGASL+ +
Sbjct:  104 HETDEDINKKAKAIFANGLTPIVCCGESLETYEAGKAVEFVGAQVSAALAGLSAEQVASLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEAD 242
[Close]
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_STRPG (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=tpiA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.686e-23
Identity = 62/137 (45.26%), Postives = 82/137 (59.85%), Query Frame = -1 
Query:  240 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 644
            +E +E +  K     + GL  I C GE+LE  EAG  +E V AQ  A    +S+   +++VLAYEP+WAIGTGK AT   AQ +   +R  + A+   E+A   R+ YGGSV   N K+  A PDVDG LVGGASL+
Sbjct:  104 HETDEDINKKAKAIFANGLTPIVCCGESLETYEAGKAVEFVGAQVSAALAGLSAEQVASLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLE 240
[Close]
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_STRP6 (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M6 GN=tpiA PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 3.686e-23
Identity = 62/137 (45.26%), Postives = 82/137 (59.85%), Query Frame = -1 
Query:  240 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 644
            +E +E +  K     + GL  I C GE+LE  EAG  +E V AQ  A    +S+   +++VLAYEP+WAIGTGK AT   AQ +   +R  + A+   E+A   R+ YGGSV   N K+  A PDVDG LVGGASL+
Sbjct:  104 HETDEDINKKAKAIFANGLTPIVCCGESLETYEAGKAVEFVGAQVSAALAGLSAEQVASLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLE 240
[Close]
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_STRAW (Triosephosphate isomerase OS=Streptomyces avermitilis GN=tpiA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.813e-23
Identity = 68/146 (46.58%), Postives = 83/146 (56.85%), Query Frame = -1 
Query:  216 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIK 644
            +E +E V  KV  +   GL  I CVGE LE REAG+ +     Q +     V +     IV+AYEPVWAIGTGKV     AQEV   +R  L    S E+A   RI YGGSV   N  E+ A+PD+DG LVGGASL   EF+ I +
Sbjct:  109 HETDEIVNAKVKASFRHGLIPILCVGEELEVREAGNHVTHTLTQVEGGLKDVPAEQAETIVIAYEPVWAIGTGKVCGADDAQEVCAAIRAKLAELYSQELADQVRIQYGGSVKSGNVAEIMAKPDIDGALVGGASLDADEFVKIAR 254
[Close]
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_DESDG (Triosephosphate isomerase OS=Desulfovibrio desulfuricans (strain G20) GN=tpiA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.813e-23
Identity = 61/139 (43.88%), Postives = 81/139 (58.27%), Query Frame = -1 
Query:  234 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSW---SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 641
            E + FVG K A+ L +GL V+ C+GETLE+RE G   +V+  Q       V +      + +AYEPVWAIGTGKVA  A+    H  +R  +L    P  A + RI+YGGSV   N   + +  +VDG LVGGASL+ E
Sbjct:  105 ESSAFVGQKTAFCLEKGLNVVLCIGETLEEREGGQLEKVLRGQLSEGLSGVPAGIAPERLAIAYEPVWAIGTGKVAGTAEIAATHAVVR-GMLRELLPAAADSMRILYGGSVKPDNAAAIISLDNVDGVLVGGASLQAE 242
[Close]
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_ANOFW (Triosephosphate isomerase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.813e-23
Identity = 62/148 (41.89%), Postives = 86/148 (58.11%), Query Frame = -1 
Query:  207 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 641
            E +E V  KV  A   GL  I C GETLE+RE+  T EVV  Q +   + ++      +V+AYEP+WAIGTGK +T   A  V   +R+ +    S E A A RI YGGSV   N     A+  +DG LVGGASL+P+ F+ ++++ +
Sbjct:  104 ETDETVNKKVLAAFKHGLVPIVCCGETLEERESNRTNEVVRVQVEKALEGLTEEQVKQVVIAYEPIWAIGTGKSSTAEDANNVCGYIRQVIANKFSQEAANAVRIQYGGSVKPENIAAFLAEEHIDGALVGGASLQPQSFLQLVEAGK 251
[Close]
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_STRP8 (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M18 GN=tpiA PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 6.287e-23
Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = -1 
Query:  234 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 644
            +E +E +  K     + GL  I C GE+LE  EAG   E V AQ  A    +S+   +++VLAYEP+WAIGTGK AT   AQ +   +R  + A+   E+A   R+ YGGSV   N K+  A PDVDG LVGGASL+ +
Sbjct:  104 HETDEDINKKAKAIFANGLTPIICCGESLETYEAGKAAEFVGAQVSAALAGLSAEQVASLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEAD 242
The following BLAST results are available for this feature:
BLAST of DC887687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_STRPC2.822e-2344.60Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRPB2.822e-2344.60Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRP32.822e-2344.60Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRP12.822e-2344.60Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRPG3.686e-2345.26Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRP63.686e-2345.26Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRAW4.813e-2346.58Triosephosphate isomerase OS=Streptomyces avermiti... [more]
TPIS_DESDG4.813e-2343.88Triosephosphate isomerase OS=Desulfovibrio desulfu... [more]
TPIS_ANOFW4.813e-2341.89Triosephosphate isomerase OS=Anoxybacillus flavith... [more]
TPIS_STRP86.287e-2344.60Triosephosphate isomerase OS=Streptococcus pyogene... [more]

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Properties
Property NameValue
Genbank descriptionDC887687 EIC Citrus sinensis cDNA clone EIC0735 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887687 ID=DC887687; Name=DC887687; organism=Citrus sinensis; type=EST; length=644bp
GGTAAACACTACATAAGACTTATTCAACTCCAGCACTTAGGAAACAAAGA
TAATTAAAAAAGTTTAAAAAAAGGTTTCAGTTGGTCGCGCTTATCAAAAA
CAAAAGTAATTCTGAAATTATACCAAACGTATTCTATATATCCACAAACA
GTAAATACTTCATCAGCAAACTGCGCTTGAAATAAAGCTCAAGAATTTTA
CTTCAGCTCAGCAGATTTGATGATGTCAATGAACTCCGGCTTCAACGAAG
CACCACCAACCAAAAATCCGTCAACATCAGGCTGTGCAGCCAATTCCTTG
CAGTTTGCACCATTTACGGATCCTCCGTAGATGATCCGTGTTGCTGCAGC
AATTTCAGGACTGGTGTTTGCAAGAAGCCATTTCCTCAGTTCAAAATGTA
CTTCTTGAGCCTGCGCTGGAGTGGCAACCTTCCCAGTTCCAATAGCCCAC
ACAGGTTCATAGGCCAAAACAATGTTTGACCAGCTTGAGACTCGATCTGC
GATTGCTTTAGTTTGTGCAGCAACAACTTCCATAGTAGATCCTGCTTCAC
GCTGCTCAAGTGTCTCACCAACACAAGCAATCACCTTCAAACCTTGAGAA
AGTGCATATGCAACCTTATCCCCAACAAACTCATTTAATTCATT
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