DC887687
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_BRASB (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tpiA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.075e-22 Identity = 60/143 (41.96%), Postives = 84/143 (58.74%), Query Frame = -1 Query: 216 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIK 641 E + V K GL I CVGET +QR+AG T++++ Q + S+ +N+ +AYEPVWAIGTG T +++H +R L+ + E A RI+YGGSV +N EL A +V+G LVGGASLK +F+ I K Sbjct: 108 ESDVVVHQKTEAVWRAGLVAIVCVGETQQQRDAGQTLDILRGQLNLSLPQGSTAANLTVAYEPVWAIGTGLTPTAKDVEQIHAFIRTLLIERFNGE-GARMRILYGGSVKPSNAAELMAVANVNGALVGGASLKAADFLAIAK 249
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_METFK (Triosephosphate isomerase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=tpiA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.322e-22 Identity = 61/136 (44.85%), Postives = 82/136 (60.29%), Query Frame = -1 Query: 243 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNI---VLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 641 E N + +K A A G+ I CVGETL++RE+G +A Q A+ VS + + V+AYEPVWAIGT + ATP QA+ H +R+ + A P A + RIIYGGSVN N +L + PD+DG L+G SL Sbjct: 104 ESNANIAEKFAIAKHYGITPIFCVGETLQERESGVMEYAIANQLDAVLS-VSGGALLDQAVIAYEPVWAIGTNRTATPEQARAAHSFIRERIAA-MHPGAAESVRIIYGGSVNPRNAAQLLSMPDIDGGLIGRCSL 237
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_LAWIP (Triosephosphate isomerase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=tpiA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.322e-22 Identity = 65/147 (44.22%), Postives = 84/147 (57.14%), Query Frame = -1 Query: 219 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWL---LANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 641 EL + K ALS G +I C+GET ++REAG V+ Q + + S S +V+AYEPVWAIGTGKVA+ H +RK L + NTS I RI+YGGSVN N + +V+G LVGGASL+ E F+ II Sbjct: 104 ELPTLIEQKTKLALSYGFSIILCIGETAQEREAGLVNSVLEQQLRTSLTDIPSKAISQLVIAYEPVWAIGTGKVASQQDIITAHTLIRKILHNMIGNTSQNI----RILYGGSVNSENASSILELDNVNGLLVGGASLQAESFMKII 246
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBM (Triosephosphate isomerase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=tpiA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.322e-22 Identity = 61/139 (43.88%), Postives = 78/139 (56.12%), Query Frame = -1 Query: 234 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 644 NE +E V KV A L I C GE+LEQRE T +V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + + ++A+ RI YGGSV K A+ ++DG LVGGASLK E Sbjct: 102 NETDETVNKKVKKAFEHNLIPIVCCGESLEQREGNVTEKVLEGQIKVDLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKSMYGEDVASKVRIQYGGSVKPGTIKAQMAKEEIDGALVGGASLKAE 240
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_FINM2 (Triosephosphate isomerase OS=Finegoldia magna (strain ATCC 29328) GN=tpiA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.951e-22 Identity = 59/139 (42.45%), Postives = 83/139 (59.71%), Query Frame = -1 Query: 234 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS---WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 641 E +E + K+A AL +K I C GE LEQRE+ EVV +Q + ++ S +V+AYEP+WAIGTGK A+ AQ + +R L S ++A + RI YGGSV N ++ ++ D+DG LVGGASL+ E Sbjct: 103 EDDELLNKKIASALKHDIKPILCCGENLEQRESNRHEEVVESQIRLDLKGINEKDIMSKLVIAYEPIWAIGTGKTASSDDAQSMCKFIRNLLSKMYSKDLADSVRIQYGGSVKPENILDIMSKEDIDGALVGGASLEAE 241
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_CLOK5 (Triosephosphate isomerase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=tpiA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.951e-22 Identity = 62/139 (44.60%), Postives = 77/139 (55.40%), Query Frame = -1 Query: 234 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTK-AIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 644 NE +E + K+ A + I C GE+L +RE G T EV+ Q K A+ D R IV+AYEP+WAIGTGK AT QA + +R + A RI YGGSV A K QP +DG LVGGASLKP+ Sbjct: 102 NEKDETINKKIKKAFEHDIIPIVCCGESLLERENGITEEVLGRQIKLALKDLRKEQVEKIVIAYEPIWAIGTGKTATDKQANDTIAHIRGVVSKMYGENAAEVVRIQYGGSVKPATIKAQMEQPHIDGALVGGASLKPQ 240
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_XYLFT (Triosephosphate isomerase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=tpiA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.186e-21 Identity = 61/136 (44.85%), Postives = 80/136 (58.82%), Query Frame = -1 Query: 243 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 644 +E +E V K A ALS GL+ I CVGE+L QREAG +A Q + V + ++AYEPVWAIGTG+ A P+Q Q +H +R +A I + I+YGG + N EL +Q DVDG L+GGASL Sbjct: 102 HEDSELVARKFAAALSAGLRPILCVGESLPQREAGQAEVAIAMQLAPVLALVGPQGVARGLIAYEPVWAIGTGRHADPSQVQAMHAFIR-GEIARQDARIGDSLLILYGGGIKPCNAAELFSQQDVDGGLIGGASL 236
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_XYLFM (Triosephosphate isomerase OS=Xylella fastidiosa (strain M12) GN=tpiA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.186e-21 Identity = 61/136 (44.85%), Postives = 80/136 (58.82%), Query Frame = -1 Query: 243 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 644 +E +E V K A ALS GL+ I CVGE+L QREAG +A Q + V + ++AYEPVWAIGTG+ A P+Q Q +H +R +A I + I+YGG + N EL +Q DVDG L+GGASL Sbjct: 102 HEDSELVARKFAAALSAGLRPILCVGESLPQREAGQAEVAIAMQLAPVLALVGPQGVARGLIAYEPVWAIGTGRHADPSQVQAMHAFIR-GEIARQDARIGDSLLILYGGGIKPCNAAELFSQQDVDGGLIGGASL 236
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_XYLFA (Triosephosphate isomerase OS=Xylella fastidiosa GN=tpiA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.186e-21 Identity = 61/136 (44.85%), Postives = 80/136 (58.82%), Query Frame = -1 Query: 243 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 644 +E +E V K A ALS GL+ I CVGE+L QREAG +A Q + V + ++AYEPVWAIGTG+ A P+Q Q +H +R +A I + I+YGG + N EL +Q DVDG L+GGASL Sbjct: 102 HEDSELVARKFAAALSAGLRPILCVGESLPQREAGQAEVAIAMQLAPVLALVGPQGVARGLIAYEPVWAIGTGRHADPSQVQAMHAFIR-GEIARQDARIGDSLLILYGGGIKPCNAAELFSQQDVDGGLIGGASL 236
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_XYLF2 (Triosephosphate isomerase OS=Xylella fastidiosa (strain M23) GN=tpiA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.186e-21 Identity = 61/136 (44.85%), Postives = 80/136 (58.82%), Query Frame = -1 Query: 243 NELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 644 +E +E V K A ALS GL+ I CVGE+L QREAG +A Q + V + ++AYEPVWAIGTG+ A P+Q Q +H +R +A I + I+YGG + N EL +Q DVDG L+GGASL Sbjct: 102 HEDSELVARKFAAALSAGLRPILCVGESLPQREAGQAEVAIAMQLAPVLALVGPQGVARGLIAYEPVWAIGTGRHADPSQVQAMHAFIR-GEIARQDARIGDSLLILYGGGIKPCNAAELFSQQDVDGGLIGGASL 236 The following BLAST results are available for this feature:
BLAST of DC887687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887687 ID=DC887687; Name=DC887687; organism=Citrus sinensis; type=EST; length=644bpback to top |