DC887687
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPG (Triosephosphate isomerase OS=Pseudomonas putida (strain GB-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.673e-32 Identity = 75/147 (51.02%), Postives = 100/147 (68.03%), Query Frame = -1 Query: 210 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 641 E +E + K A A ++GLK + C+GETLE+REAG T+EVV Q +I + V +++N V+AYEPVWAIGTG ATP QAQ+VH +R L A + E+AA +++YGGSV AN EL PD+DG L+GGASL EF I ++A Sbjct: 104 ETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFANAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAEDA-EVAAKVQLLYGGSVKAANAAELFGMPDIDGGLIGGASLNADEFGAICRAA 249
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_METCA (Triosephosphate isomerase OS=Methylococcus capsulatus GN=tpiA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.651e-31 Identity = 75/149 (50.34%), Postives = 95/149 (63.76%), Query Frame = -1 Query: 204 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAEL 641 E NE V + A+ LK I CVGETLEQRE G T+ V+ AQ + + V S + V+AYEPVWA+GTG+ AT QAQEVH+ +R L+A +PE+A A +IIYGGSV N EL A PD+DG L+GGASL F+ I S + Sbjct: 103 ESNELVASRYEQAIQGHLKPILCVGETLEQREQGRTLAVIGAQIDTVFEFAGVQSLEHAVIAYEPVWAVGTGRSATTGQAQEVHYHIRS-LIARWNPEVAQAVQIIYGGSVKPENSAELFAMPDIDGGLIGGASLDARAFLSICHSVSV 250
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPK (Triosephosphate isomerase OS=Pseudomonas putida (strain KT2440) GN=tpiA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31 Identity = 74/147 (50.34%), Postives = 100/147 (68.03%), Query Frame = -1 Query: 210 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 641 E +E + K A A ++GLK + C+GETLE+REAG T+EVV Q +I + V ++++ V+AYEPVWAIGTG ATP QAQ+VH +R L A + E+AA +++YGGSV AN EL PD+DG L+GGASL EF I ++A Sbjct: 104 ETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFADAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAEDA-EVAAKVQLLYGGSVKAANAAELFGMPDIDGGLIGGASLNADEFGAICRAA 249
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_PSEP1 (Triosephosphate isomerase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=tpiA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31 Identity = 74/147 (50.34%), Postives = 100/147 (68.03%), Query Frame = -1 Query: 210 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 641 E +E + K A A ++GLK + C+GETLE+REAG T+EVV Q +I + V ++++ V+AYEPVWAIGTG ATP QAQ+VH +R L A + E+AA +++YGGSV AN EL PD+DG L+GGASL EF I ++A Sbjct: 104 ETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFADAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAEDA-EVAAKVQLLYGGSVKAANAAELFGMPDIDGGLIGGASLNADEFGAICRAA 249
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_PSEF5 (Triosephosphate isomerase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=tpiA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31 Identity = 76/139 (54.68%), Postives = 94/139 (67.63%), Query Frame = -1 Query: 210 KVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 617 K A A + GLK + CVGETLEQREAG T+EVV Q +I + V +++N V+AYEPVWAIGTG ATP QAQ+VH +R L A S E+A R++YGGSV AN EL PD+DG L+GGASL EF I ++A Sbjct: 112 KFAAAQACGLKPVLCVGETLEQREAGKTLEVVGRQLGSIIEELGVGAFANAVIAYEPVWAIGTGLTATPQQAQDVHAAIRAQLAAENS-EVARGVRLLYGGSVKAANAVELFGMPDIDGGLIGGASLNADEFGAICRAA 249
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_CHLCH (Triosephosphate isomerase OS=Chlorobium chlorochromatii (strain CaD3) GN=tpiA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.272e-31 Identity = 74/145 (51.03%), Postives = 97/145 (66.90%), Query Frame = -1 Query: 210 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 641 E N V +V AL++GL VI CVGETL +RE+G T ++V+AQ + VS SN+V+AYEPVWAIGTGK AT AQA+EVH +R + A A RI YGGSV +N EL A P++DG L+GGASL +F+ I+++A Sbjct: 105 ETNATVNLRVKKALAEGLDVILCVGETLAERESGVTGDIVSAQVREGLVGVSDISNVVIAYEPVWAIGTGKTATSAQAEEVHLMIRTLVTELYGEPAAQALRIQYGGSVKPSNAVELFAMPNIDGGLIGGASLNAADFVAIVQAA 249
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPW (Triosephosphate isomerase OS=Pseudomonas putida (strain W619) GN=tpiA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.192e-31 Identity = 72/147 (48.98%), Postives = 97/147 (65.99%), Query Frame = -1 Query: 210 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 641 E E + K A A GL + C+GETLE+REAG T+EVV Q ++ D +++++N V+AYEPVWAIGTG A+P QAQ+VH +RK L A + E+A +++YGGSV AN EL PD+DG L+GGASL EF I ++A Sbjct: 104 ESEEVLNRKFAAAQKSGLTPVLCIGETLEEREAGKTLEVVGRQLSSVIDAFGIAAFANAVIAYEPVWAIGTGLTASPQQAQDVHAAIRKQLAAKDA-EVAQNVQLLYGGSVKAANAAELFGMPDIDGGLIGGASLNADEFGAICRAA 249
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.192e-31 Identity = 73/148 (49.32%), Postives = 102/148 (68.92%), Query Frame = -1 Query: 207 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 641 E + + K A+A + GL I CVGETLE+R++G+T +V Q +A+ D V ++++N ++AYEPVWAIGTGK A+P QAQ VH LR++ LA P+IA + R++YGGSV N L AQ D+DG L+GGASL + FI I ++AE Sbjct: 101 ETDAQIASKFAHAQAAGLVPILCVGETLEERDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAYEPVWAIGTGKTASPEQAQAVHACLRQF-LAKDDPDIAQSLRLLYGGSVKADNAALLFAQSDIDGGLIGGASLTADSFIAICQAAE 247
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPF (Triosephosphate isomerase OS=Pseudomonas fluorescens (strain Pf0-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.070e-30 Identity = 76/147 (51.70%), Postives = 97/147 (65.99%), Query Frame = -1 Query: 210 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 641 E + + K A A + GL + CVGETLEQREAG T+EVV Q +I + V +++N V+AYEPVWAIGTG ATP QAQ+VH +R+ L A S E+A R++YGGSV AN EL PD+DG L+GGASL EF I ++A Sbjct: 104 ERDGMLNRKFAAAQACGLIPVLCVGETLEQREAGKTLEVVGRQLGSIIEELGVGAFANAVIAYEPVWAIGTGLTATPQQAQDVHKAIREQLAAENS-EVARGVRLLYGGSVKAANAVELFGMPDIDGGLIGGASLNADEFGAICRAA 249
BLAST of DC887687 vs. ExPASy Swiss-Prot
Match: TPIS_PSEU5 (Triosephosphate isomerase OS=Pseudomonas stutzeri (strain A1501) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.825e-30 Identity = 77/147 (52.38%), Postives = 96/147 (65.31%), Query Frame = -1 Query: 210 ELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 641 E +E V K A A + GLK + C+GETLE+REAG T+EVVA Q + D V ++ + V+AYEPVWAIG+G ATP QAQEVH +R LA + IA R++YGGSV N EL A D+DG LVGGASLK EF I ++A Sbjct: 104 ETDEVVSQKFAAAQAGGLKPVLCLGETLEEREAGRTLEVVARQLGQVLDDQGVEAFQSAVIAYEPVWAIGSGLTATPEQAQEVHAAIRD-QLARSDRRIAEGVRLLYGGSVKADNAAELFAMADIDGGLVGGASLKADEFGAICRAA 249 The following BLAST results are available for this feature:
BLAST of DC887687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887687 ID=DC887687; Name=DC887687; organism=Citrus sinensis; type=EST; length=644bpback to top |