CN185124

Overview
NameCN185124
Unique NameCN185124
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN185124_ssr8 microsatellite CN185124_ssr8:8..17. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2461 contig Csv1_Contig2461:1..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_PENCI (Enolase OS=Penicillium citrinum GN=enoA PE=1 SV=3)

HSP 1 Score: 254.603 bits (649), Expect = 4.747e-67
Identity = 146/251 (58.17%), Postives = 175/251 (69.72%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKSVIGMD 808
            I  V AR ++ SRGNPTVEVDV T  G + RA VPSGASTG +EA+ELRDG  + + GKGV KAV NVN  IGPAL  +  D  +Q  +D ++  +LDGT N     K  LGANAIL VSLA+ KA A  K +PLY HI++L+G K   VLPVP  NV+NGGSHAG +LA QEFMI+P  A SF E ++ G EVY  LKA+ KKKYGQ A NVGDEGG AP+IQ  +E L+L+  AI +AGYTGK  I MD
Sbjct:    3 IAKVHARSVYVSRGNPTVEVDVVTETG-LHRAIVPSGASTGQHEAVELRDGDKAKWGGKGVLKAVKNVNETIGPALIKENIDVKDQAKVDEFL-NKLDGTAN-----KGNLGANAILGVSLAIAKAAAAEKGVPLYVHISDLAGTKKPYVLPVPFQNVLNGGSHAGGRLAFQEFMIVPDTAESFSEGLRQGAEVYQKLKALAKKKYGQSAGNVGDEGGVAPDIQTAEEALDLITEAIEQAGYTGKISIAMD 246          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_THEON (Enolase OS=Thermococcus onnurineus (strain NA1) GN=eno PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 8.098e-67
Identity = 146/238 (61.34%), Postives = 168/238 (70.59%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGY 781
            ITAV AR+I DSRGNPTVEV+V T    + RAAVPSGASTG +EALELRDGG  Y GKGV +AV NVN II P L G D T Q  ID  M++ LDGT N     K  LGANAIL VSLAV KA A+   +PLY++I    G    V+PVP  NVINGG HAGN+L  QEFMI+PVGA SF+EA++   E YH LK VI +KYG+DA NVGDEGGFAP ++E  E LE L  AI +AGY
Sbjct:    7 ITAVVAREILDSRGNPTVEVEVYTPIS-MGRAAVPSGASTGTHEALELRDGGKRYHGKGVRRAVENVNKIIAPELIGMDVTWQRDIDTLMLE-LDGTEN-----KSNLGANAILGVSLAVAKAAANALGLPLYQYIG---GTNAYVMPVPMSNVINGGVHAGNELDFQEFMIMPVGADSFREAIRWVSETYHVLKKVIAEKYGKDAINVGDEGGFAPPMKEVTEPLETLIKAIEEAGY 234          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_CARHZ (Enolase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=eno PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.381e-66
Identity = 141/245 (57.55%), Postives = 176/245 (71.84%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYT-GKSV 796
            I  V AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA+ELRD     YLGKGV++AV NVN+IIGP + G D  +Q  ID Y+++ LDGT N     K KLGANAIL VS+AV KA A+   +PLY++   L G    VLP P  N++NGG HA N + +QEFMI+P+GASSF EA++MG EV+H+LK V+K K G + T VGDEGGFAPN++ N+E +E++  AI KAGYT GK +
Sbjct:    4 IREVIAREILDSRGNPTVEVDVILEDGTWGRAAVPSGASTGAFEAVELRDNDPQRYLGKGVTQAVENVNSIIGPEILGFDALDQVGIDEYLIE-LDGTPN-----KGKLGANAILGVSMAVAKAAANYLGLPLYRY---LGGTNARVLPAPMMNILNGGKHADNNVDIQEFMIMPLGASSFSEALRMGAEVFHNLKKVLKGK-GYN-TAVGDEGGFAPNLKSNEEAIEVIVEAIEKAGYTPGKDI 237          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_YARLI (Enolase OS=Yarrowia lipolytica GN=ENO PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.077e-66
Identity = 142/251 (56.57%), Postives = 175/251 (69.72%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRD-GGSDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKSVIGMD 808
            +  + AR ++DSRGNPTVEVD+TT  G + RA VPSGASTG++EALELRD   S + GKGV KAV NVN II PA+  A  D  +Q A D ++++ LDGT N     K KLGANAIL VS+A  +AGA  K +PLY+HIA L+ +    VLPVP  NV+NGGSHAG +LA+QEFMI P    SF E+++ G EVYH LK + KK+YG  A NVGDEGG AP+IQ  +E L L+  AI  AGYTGK  I +D
Sbjct:    3 VEKLHARYVYDSRGNPTVEVDLTTQHG-LFRAIVPSGASTGVHEALELRDKDASKWGGKGVLKAVQNVNEIIAPAVIDAKLDVKDQAAFDKFLLE-LDGTEN-----KSKLGANAILGVSIAAARAGAGEKGVPLYEHIASLASSPQPYVLPVPFLNVLNGGSHAGGRLAIQEFMIAPTEFESFSESLRAGTEVYHELKKLAKKEYGASAGNVGDEGGVAPDIQTAEEALNLITEAIDAAGYTGKIKIAID 246          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_METTP (Enolase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=eno PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.249e-66
Identity = 136/251 (54.18%), Postives = 171/251 (68.13%), Query Frame = 2
Query:   56 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKSVIGMD 808
            M++ I  + AR+I DSRGNPTVEVDV T  G   RAAVPSGASTG YEALELRDGG  Y GKGV KAV NVN +IGP L G D  +Q  +D  M++ +DGT N     K  LGANAIL VSLAV KA A    +PLY+++  +S  +   LPVP+ NV+NGG HAGN L++QEFMI P GA SF EA++M  E YH L  +++ KYG  ATNVG EGG+AP I + ++ L+ +  A+   GYT +  +G+D
Sbjct:    1 MSLEIEKIHAREILDSRGNPTVEVDVWTCCGF-GRAAVPSGASTGTYEALELRDGGDRYDGKGVLKAVRNVNEVIGPKLIGMDVIDQRGVDQIMIE-MDGTPN-----KSNLGANAILGVSLAVAKAAASSLGMPLYRYLGGVSATR---LPVPSLNVLNGGKHAGNDLSIQEFMIEPWGADSFSEALRMAAETYHALGRILRGKYGNVATNVGFEGGYAPPISKTRDALDAIMAALDVTGYTEEIKLGLD 241          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_CALS8 (Enolase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=eno PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.249e-66
Identity = 139/250 (55.60%), Postives = 178/250 (71.20%), Query Frame = 2
Query:   53 KMAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYT-GKSV 796
            K+ ++ITAVKAR+I DSRGNPTVEV+V  +D  V RAAVPSGASTG++EA+ELRDG    Y+GKGV KAV NVN +I P + G +   Q  ID  M+ +LDGT N     K KLGANAIL VSLAV KA A+   +PLY++I  ++      LPVP  N++NGG HA N + +QEFMI+PVGA SF EA++M  E +H L+ V+K + G + T VGDEGGFAPN++ N+E LE++  AI KAGYT GK +
Sbjct:    2 KVDLSITAVKAREILDSRGNPTVEVEVVVNDEFVGRAAVPSGASTGMFEAVELRDGDKKRYMGKGVLKAVENVNEVIAPEIIGMNALNQVEIDRLMI-ELDGTEN-----KSKLGANAILGVSLAVAKAAANALGLPLYQYIGGVNAK---YLPVPMMNILNGGKHADNSVDLQEFMIMPVGAKSFSEALRMCAETFHQLRNVLKAR-GYN-TTVGDEGGFAPNLKSNEEPLEVIVEAIEKAGYTPGKDI 240          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_PYRHO (Enolase OS=Pyrococcus horikoshii GN=eno PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.953e-66
Identity = 143/238 (60.08%), Postives = 169/238 (71.01%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGY 781
            ITA+ AR+I DSRGNPTVEVDV T    + RAAVPSGASTG +EA+ELRDGG  Y GKGV +AV NVN II P L G D   Q  ID  +++ LDGT N     K  LGANAILAVSLAV KA A+  ++PLY++   L G    VLPVP  NVINGG HAGN+L  QEFMI+P+GASSF+EA++   E YH LK VI  KYG++A NVGDEGGFAP ++E  E L+ L  AI +AGY
Sbjct:    7 ITAIVAREILDSRGNPTVEVDVHTPIA-MGRAAVPSGASTGTHEAVELRDGGKRYHGKGVRRAVENVNKIIAPELIGMDVRWQREIDKLLIE-LDGTEN-----KSNLGANAILAVSLAVAKAAANSLELPLYQY---LGGVNAYVLPVPLSNVINGGVHAGNELDFQEFMIMPIGASSFREAIRWVSETYHVLKRVIMGKYGKNAVNVGDEGGFAPPMKEVTEPLDALIKAIEEAGY 234          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_PYRKO (Enolase OS=Pyrococcus kodakaraensis GN=eno PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.169e-65
Identity = 143/238 (60.08%), Postives = 169/238 (71.01%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGY 781
            IT V AR+I DSRGNPTVEV+V T    + RAAVPSGASTG +EALELRDGGS Y GKGV +AV NVN II P + G D T Q  ID  M++ LDGT N     K  LGANAIL VSLAV KA A+   +PLY++I    G    V+PVP  NVINGG HAGN+L  QEFMI+PVGA SF+EA++   E YH LK VI +KYG++A NVGDEGGFAP ++E  E L++L  AI +AGY
Sbjct:    7 ITNVIAREILDSRGNPTVEVEVYTPIS-MGRAAVPSGASTGTHEALELRDGGSRYHGKGVRRAVENVNKIIAPEIIGMDVTWQRDIDTLMLE-LDGTEN-----KSNLGANAILGVSLAVAKAAANALGLPLYQYIG---GTNAYVMPVPMSNVINGGVHAGNELDFQEFMIMPVGADSFREAIRWVSETYHVLKKVIMEKYGRNAVNVGDEGGFAPPMKEVTEPLDVLIKAIEEAGY 234          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_THEGJ (Enolase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eno PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.527e-65
Identity = 142/238 (59.66%), Postives = 168/238 (70.59%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGY 781
            ITAV AR+I DSRGNPTVEV+V T    + RAAVPSGASTG +EALELRDGG  + GKGV +AV NVN II P + G D T Q  ID  M++ LDGT N     K  LGANAIL VSLAV KA A+   +PLY++I    G    V+PVP  NVINGG HAGN+L  QEFMI+PVGA SF+E ++   E YH LK VI +KYG++A NVGDEGGFAP ++E  E LE+L  AI +AGY
Sbjct:    7 ITAVVAREILDSRGNPTVEVEVYTPVS-MGRAAVPSGASTGTHEALELRDGGKRFHGKGVRRAVENVNKIIAPEIIGMDVTWQRDIDMLMIE-LDGTEN-----KSNLGANAILGVSLAVAKAAANALGLPLYQYIG---GTNAYVMPVPMSNVINGGVHAGNELDFQEFMIMPVGAKSFREGIRWVSETYHTLKKVIAEKYGKNAVNVGDEGGFAPPMKEVTEPLEVLIKAIEEAGY 234          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_PYRAB (Enolase OS=Pyrococcus abyssi GN=eno PE=3 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 1.527e-65
Identity = 142/238 (59.66%), Postives = 169/238 (71.01%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGY 781
            I AV AR+I DSRGNPTVEVDV T    + RAAVPSGASTG +EA+ELRDGG  Y GKGV +AV NVN II P L G D   Q  ID  +++ LDGT N     K  LGANAILAVSLAV KA A+  ++PLY++   L G    VLPVP  NVINGG HAGN L  QEFMI+P+GA+SF+EA++   E YH LK VI +KYG++A NVGDEGGFAP ++E  E L++L  AI +AGY
Sbjct:    7 IVAVIAREILDSRGNPTVEVDVHTPIS-MGRAAVPSGASTGTHEAVELRDGGKRYHGKGVRRAVENVNKIIAPELVGMDVRWQREIDRLLIE-LDGTEN-----KSNLGANAILAVSLAVAKAAANALELPLYQY---LGGVNAYVLPVPLSNVINGGVHAGNDLDFQEFMIMPIGANSFREAIRWVSETYHVLKKVIAEKYGKNAVNVGDEGGFAPPMKEVTEPLDVLIKAIEEAGY 234          
The following BLAST results are available for this feature:
BLAST of CN185124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_PENCI4.747e-6758.17Enolase OS=Penicillium citrinum GN=enoA PE=1 SV=3[more]
ENO_THEON8.098e-6761.34Enolase OS=Thermococcus onnurineus (strain NA1) GN... [more]
ENO_CARHZ1.381e-6657.55Enolase OS=Carboxydothermus hydrogenoformans (stra... [more]
ENO_YARLI3.077e-6656.57Enolase OS=Yarrowia lipolytica GN=ENO PE=3 SV=1[more]
ENO_METTP5.249e-6654.18Enolase OS=Methanosaeta thermophila (strain DSM 61... [more]
ENO_CALS85.249e-6655.60Enolase OS=Caldicellulosiruptor saccharolyticus (s... [more]
ENO_PYRHO8.953e-6660.08Enolase OS=Pyrococcus horikoshii GN=eno PE=3 SV=1[more]
ENO_PYRKO1.169e-6560.08Enolase OS=Pyrococcus kodakaraensis GN=eno PE=3 SV... [more]
ENO_THEGJ1.527e-6559.66Enolase OS=Thermococcus gammatolerans (strain DSM ... [more]
ENO_PYRAB1.527e-6559.66Enolase OS=Pyrococcus abyssi GN=eno PE=3 SV=2[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0006M17_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006M17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185124 ID=CN185124; Name=CN185124; organism=Citrus sinensis; type=EST; length=810bp
GAGGAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGCTTTTCCAGCTTTC
AGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCAGATCTTTGAC
AGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACATCAGATGGCCA
CGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGAATTTATGAGG
CGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAAGGGTGTATCG
AAGGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCACTCGCTGGCAA
GGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTACAACAACTTG
ATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAGAAGCTTGGAGCAAAC
GCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTGCACATGTCAA
GAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGTAACAAGAATT
TGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGGATCACATGCT
GGAAACAAACTTGCTATGCAGGAGTTTATGATTCTTCCTGTAGGAGCTTC
CTCTTTCAAAGAAGCCATGAAGATGGGTGTAGAAGTATATCACCATCTGA
AGGCTGTGATTAAAAAGAAATACGGCCAGGATGCTACAAATGTTGGTGAT
GAAGGCGGTTTTGCTCCCAATATTCAGGAGAACAAGGAAGGACTTGAATT
GCTCAACACAGCCATTGCTAAAGCCGGTTACACAGGCAAAAGTGTCATTG
GAATGGATGT
back to top