CN185124

Overview
NameCN185124
Unique NameCN185124
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN185124_ssr8 microsatellite CN185124_ssr8:8..17. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2461 contig Csv1_Contig2461:1..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_GEOSW (Enolase OS=Geobacillus sp. (strain WCH70) GN=eno PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.994e-65
Identity = 139/239 (58.16%), Postives = 172/239 (71.97%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGY 781
            I  V AR++ DSRGNPTVEV+V T DG   RA VPSGASTG YEA+ELRDG  S YLGKGV KAV NVN II PA+ G + T+Q  ID  +++ LDGT N     K KLGANAIL VSLAV +A A    +PLY++   L G     LPVP  N++NGG+HA N + +QEFMI+PVGA SF+EA++MG E++H LKAV+K+K G + T VGDEGGFAPN++ N+E L+ +  AI KAGY
Sbjct:    4 IVDVYAREVLDSRGNPTVEVEVYTEDGGFGRALVPSGASTGEYEAVELRDGDKSRYLGKGVLKAVENVNEIIAPAIIGFEVTDQVGIDKTLIE-LDGTEN-----KSKLGANAILGVSLAVARAAADELDMPLYQY---LGGFNAKTLPVPMMNILNGGAHADNNVDIQEFMIMPVGAKSFREALRMGAEIFHSLKAVLKEK-GYN-TAVGDEGGFAPNLKSNEEALQTIIEAIEKAGY 231          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_THET8 (Enolase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=eno PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.443e-65
Identity = 134/240 (55.83%), Postives = 168/240 (70.00%), Query Frame = 2
Query:   65 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYT 784
            TI  V+AR++ DSRG PTVE +V    G   RA VPSGASTG +EALELRDGG  YLGKGV +AV NVN  I P L G D  +Q  +D  M+ +LDGT N     K  LGANA+LAVSLAV +A A    +PLY++   L G + + LPVP  NVINGG HA N++  QEFM++P GA SF EA+++G EV+H LKAV+K+K    +TNVGDEGGFAP+++ N+E +ELL  AI +AGYT
Sbjct:    3 TIVGVRAREVLDSRGFPTVEAEVELEGGARGRAMVPSGASTGTHEALELRDGGKRYLGKGVRRAVENVNERIAPELVGMDALDQEGVDRAML-ELDGTPN-----KANLGANAVLAVSLAVARAAAEALGLPLYRY---LGGVQGVTLPVPLMNVINGGKHADNRVDFQEFMLVPAGAGSFAEALRIGAEVFHTLKAVLKEK--GYSTNVGDEGGFAPDLRSNEEAVELLLLAIERAGYT 231          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_THET2 (Enolase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=eno PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.443e-65
Identity = 134/240 (55.83%), Postives = 168/240 (70.00%), Query Frame = 2
Query:   65 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYT 784
            TI  V+AR++ DSRG PTVE +V    G   RA VPSGASTG +EALELRDGG  YLGKGV +AV NVN  I P L G D  +Q  +D  M+ +LDGT N     K  LGANA+LAVSLAV +A A    +PLY++   L G + + LPVP  NVINGG HA N++  QEFM++P GA SF EA+++G EV+H LKAV+K+K    +TNVGDEGGFAP+++ N+E +ELL  AI +AGYT
Sbjct:    3 TIVGVRAREVLDSRGFPTVEAEVELEGGARGRAMVPSGASTGTHEALELRDGGKRYLGKGVRRAVENVNERIAPELVGMDALDQEGVDRAML-ELDGTPN-----KANLGANAVLAVSLAVARAAAEALGLPLYRY---LGGVQGVTLPVPLMNVINGGKHADNRVDFQEFMLVPAGAGSFAEALRIGAEVFHTLKAVLKEK--GYSTNVGDEGGFAPDLRSNEEAVELLLLAIERAGYT 231          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_META3 (Enolase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=eno PE=3 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 4.443e-65
Identity = 136/247 (55.06%), Postives = 167/247 (67.61%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKSVIGMD 808
            I  +KAR++ DSRGNPTVEV+V T+ G+   A VPSGASTG +EA+ELRD    + GKGV  AV NVN+II P L G D   Q  ID YM++ LD T N     K KLGANAILAVS+AV KA A    +PLYK+I    G  + ++PVP  NVINGG HAGN L  QEFMI+PVGA S  EA++M  E YH LK VI  KYG++A+NVGDEGGFAP + + +E L+LL  A+  AGY  +    +D
Sbjct:    7 ILDIKAREVIDSRGNPTVEVEVLTAGGY-GSAIVPSGASTGTHEAVELRDKSQRFGGKGVLVAVDNVNSIIAPELIGFDSRTQREIDTYMIE-LDRTAN-----KGKLGANAILAVSMAVAKAAASTASLPLYKYIG---GCNSYIMPVPMMNVINGGEHAGNALEFQEFMIMPVGADSISEAIRMCAETYHTLKKVIVSKYGKNASNVGDEGGFAPPVSDIRETLDLLTDAVKMAGYEDEITFALD 243          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_PYRFU (Enolase OS=Pyrococcus furiosus GN=eno PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.803e-65
Identity = 142/238 (59.66%), Postives = 168/238 (70.59%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGY 781
            I  V AR+I DSRGNPTVEVDV T  G + RAAVPSGASTG +EALELRDGG  Y GKGV +AV NVN II P L G D   Q  ID  +++ LDGT N     K  +GANAILAVSLAV KA A+  ++PLY++   L G    VLPVP  NVINGG HAGN L  QEFMI+P+GA SF+EA++   E YH LK VI +KYG++A NVGDEGGFAP ++E  E L++L  AI +AGY
Sbjct:    7 IVGVVAREILDSRGNPTVEVDVYTHVG-MGRAAVPSGASTGTHEALELRDGGKRYHGKGVRRAVENVNKIIAPELIGMDVRWQREIDALLLE-LDGTEN-----KSNVGANAILAVSLAVAKAAANSLELPLYQY---LGGVNAYVLPVPLSNVINGGVHAGNDLDFQEFMIMPIGADSFREAIRWVSETYHVLKKVIMEKYGKNAVNVGDEGGFAPPMKEVTEPLDVLIKAIEEAGY 234          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_PSEF5 (Enolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=eno PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.803e-65
Identity = 134/241 (55.60%), Postives = 169/241 (70.12%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYT 784
            I  +K R++ DSRGNPTVE DV   +G +  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKDP +Q A+D  M++ LDGT N     K  LGANAILAVSLA  KA A  + +PLY HIA L+G   +  +PVP  N+INGG HA N + +QEFM+ PVGA SF E ++MG E++HHLKAV+K + G + T VGDEGGFAPN+  N++ L++++ A+A AGYT
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVLLDNGIIGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDPIDQKALDQAMIK-LDGTEN-----KATLGANAILAVSLAAAKAAAQDQDLPLYAHIANLNGTPGVYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKSFSEGLRMGTEIFHHLKAVLKAR-GLN-TAVGDEGGFAPNLASNEDALKVISEAVANAGYT 236          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_BACHD (Enolase OS=Bacillus halodurans GN=eno PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.803e-65
Identity = 134/239 (56.07%), Postives = 168/239 (70.29%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYT 784
            IT V AR++ DSRGNPTVEV+V    G + RA VPSGASTG YEA+ELRDGG  +LGKGV KAV NVN +I P L G D  +Q  ID +M+ +LDGT N     K KLGANAIL VS+AV +A A+   +PLY ++   +  +   LPVP  N+INGG HA N + +QEFMI+PVGA SFKEA++ G E++H LK V+K K G + T VGDEGGFAPN+  N+E L+ +  AI +AGYT
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVYLESGAMGRALVPSGASTGEYEAVELRDGGERFLGKGVLKAVENVNEVIAPELIGFDALDQIGIDQHMI-ELDGTEN-----KGKLGANAILGVSMAVARAAANALDLPLYVYLGGFNAKQ---LPVPMMNIINGGEHADNNVDIQEFMIMPVGAESFKEALRTGTEIFHSLKKVLKSK-GYN-TAVGDEGGFAPNLSSNEEALQTIIEAIEQAGYT 231          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_ACIAD (Enolase OS=Acinetobacter sp. (strain ADP1) GN=eno PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.803e-65
Identity = 138/245 (56.33%), Postives = 172/245 (70.20%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKSVI 799
            I  ++AR+I DSRGNPT+E DV  + G V RA  PSGASTG  EALELRDG  + YLGKGV  AV+NVN II  AL GK   EQ  IDN M++ LDGT N     K+KLGANA LAVSLA  +A A  KKIPL+++IA+L G   L +PVP  N+INGGSHA N + +QEFMI PVG +SF EA++ G E++H LK+V+ KK G + T VGDEGGFAPN++ N+E + ++  AI + GY   S I
Sbjct:    6 IVDIRAREILDSRGNPTIEADVILASGVVGRACAPSGASTGSREALELRDGDKARYLGKGVKTAVNNVNTIIRDALVGKSVFEQKDIDNTMIE-LDGTEN-----KEKLGANATLAVSLAAARAAADEKKIPLFQYIADLRGQTILTMPVPMMNIINGGSHADNNVDIQEFMIEPVGFTSFSEALRAGAEIFHSLKSVLNKK-GLN-TAVGDEGGFAPNLRSNEEAITVILEAIGQTGYKAGSDI 242          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO1_PSEU2 (Enolase 1 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=eno1 PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.803e-65
Identity = 135/241 (56.02%), Postives = 167/241 (69.29%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYT 784
            I  +K R++ DSRGNPTVE DV   +G +  A  PSGASTG  EALELRDG  S Y+GKGV KAV+N+N  I   L GKDP +Q A+D+ M++ LDGT N     K  LGANAILAVSLA  KA A  + +PLY HIA L+G   +  +PVP  N+INGG HA N + +QEFMI PVGA SF E ++ G E++HHLKAV+K + G + T VGDEGGFAPN+  NKE L+ +  A+A AGYT
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVLLDNGIIGSACAPSGASTGSREALELRDGDKSRYMGKGVLKAVANINGPIRDLLLGKDPVDQKALDHAMIE-LDGTEN-----KASLGANAILAVSLAAAKAAAQDQDLPLYAHIANLNGTPGVYSMPVPMMNIINGGEHADNNIDIQEFMIQPVGAKSFAEGLRWGTEIFHHLKAVLKAR-GLN-TAVGDEGGFAPNLASNKEALDAIAEAVANAGYT 236          
BLAST of CN185124 vs. ExPASy Swiss-Prot
Match: ENO_PSEMY (Enolase OS=Pseudomonas mendocina (strain ymp) GN=eno PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 9.899e-65
Identity = 135/240 (56.25%), Postives = 167/240 (69.58%), Query Frame = 2
Query:   68 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGY 781
            I  +K R++ DSRGNPTVE DV    G V  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKD T+Q A+D  M++ LDGT N     K KLGANAILAVSLA  KA A  K +PLY HIA+L+G   +  +PVP  N+INGG HA N + +QEFM+ PVGA +F +A++MG E++HHLKAV+K + G + T VGDEGGFAPN+  N++ L  +  A+A AGY
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVILEGGIVGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDATDQQALDRAMIE-LDGTEN-----KAKLGANAILAVSLAAAKAAAQAKGVPLYAHIADLNGTPGVYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKNFADALRMGAEIFHHLKAVLKAR-GLN-TAVGDEGGFAPNLASNEDALAAIAEAVANAGY 235          
The following BLAST results are available for this feature:
BLAST of CN185124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_GEOSW1.994e-6558.16Enolase OS=Geobacillus sp. (strain WCH70) GN=eno P... [more]
ENO_THET84.443e-6555.83Enolase OS=Thermus thermophilus (strain HB8 / ATCC... [more]
ENO_THET24.443e-6555.83Enolase OS=Thermus thermophilus (strain HB27 / ATC... [more]
ENO_META34.443e-6555.06Enolase OS=Methanococcus aeolicus (strain Nankai-3... [more]
ENO_PYRFU5.803e-6559.66Enolase OS=Pyrococcus furiosus GN=eno PE=3 SV=1[more]
ENO_PSEF55.803e-6555.60Enolase OS=Pseudomonas fluorescens (strain Pf-5 / ... [more]
ENO_BACHD5.803e-6556.07Enolase OS=Bacillus halodurans GN=eno PE=3 SV=1[more]
ENO_ACIAD5.803e-6556.33Enolase OS=Acinetobacter sp. (strain ADP1) GN=eno ... [more]
ENO1_PSEU25.803e-6556.02Enolase 1 OS=Pseudomonas syringae pv. syringae (st... [more]
ENO_PSEMY9.899e-6556.25Enolase OS=Pseudomonas mendocina (strain ymp) GN=e... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006M17_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006M17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185124 ID=CN185124; Name=CN185124; organism=Citrus sinensis; type=EST; length=810bp
GAGGAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGCTTTTCCAGCTTTC
AGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCAGATCTTTGAC
AGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACATCAGATGGCCA
CGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGAATTTATGAGG
CGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAAGGGTGTATCG
AAGGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCACTCGCTGGCAA
GGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTACAACAACTTG
ATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAGAAGCTTGGAGCAAAC
GCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTGCACATGTCAA
GAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGTAACAAGAATT
TGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGGATCACATGCT
GGAAACAAACTTGCTATGCAGGAGTTTATGATTCTTCCTGTAGGAGCTTC
CTCTTTCAAAGAAGCCATGAAGATGGGTGTAGAAGTATATCACCATCTGA
AGGCTGTGATTAAAAAGAAATACGGCCAGGATGCTACAAATGTTGGTGAT
GAAGGCGGTTTTGCTCCCAATATTCAGGAGAACAAGGAAGGACTTGAATT
GCTCAACACAGCCATTGCTAAAGCCGGTTACACAGGCAAAAGTGTCATTG
GAATGGATGT
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