CN185121

Overview
NameCN185121
Unique NameCN185121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185121 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 65/200 (32.50%), Postives = 88/200 (44.00%), Query Frame = 1
Query:  289 ITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLP---DAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTRE--------PLKFDNSYFVELLNGES------------------------------EGLLQLPTDKALLEDPEFRRYVELYAKDEDAFFRDYAASHKKLSELGFSPG 765
            ++ AD+  LA   AVE  GGP V+   GR+D K S      P   D       + D F   GLS +D+V LSG HT+G +H   + F+G + R+            DNSY   L+N  S                              +GL Q  TD AL+ED   R  VE  A DE++FF+ ++ S  KLS +G   G
Sbjct:  118 VSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASH--CNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKCSSSESSSLTVSNDPETSAVFDNQYYRNLETHKGLFQ--TDSALMEDNRTRTMVEELASDEESFFQRWSESFVKLSMVGVRVG 313          
BLAST of CN185121 vs. ExPASy Swiss-Prot
Match: KATG_THELT (Catalase-peroxidase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=katG PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13
Identity = 78/283 (27.56%), Postives = 113/283 (39.93%), Query Frame = 1
Query:   43 DTEYLKEI-----DKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGG-PNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD------------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH---PER--------------------------------SGFDGPWTREPLKFDNSYFVELLNGESE 615
            D +YLKE+     D    DL+ L+          + +  P+ +RL+WH AG+Y ++   GG  NGSIR     +   N  L  A+     +K K+  K+++ADL  LAG VA++  G   + F  GR+D                   K   KEG L                      PD    A  +R  F RMG++D++ VAL +GGH+ G+ H   P +                                SGF+  W+ +P KF   Y   LL  E E
Sbjct:   39 DYDYLKEVKTLDVDAVIEDLKKLMKTSQDWWPADFGHYGPLFIRLSWHSAGSYRIHDGRGGAKNGSIRFPARINWPDNINLDKAIRLLWPIKKKYGKKLSWADLIILAGTVALQDMGVKILGFSLGREDVFEADESPDWGAEQEMLSGKERFKEGELEKPFAATEMGLIYVNPEGPMGNPDPSGSAKEIRLAFTRMGMNDEETVALIAGGHSFGKCHGAGPSKDLGPDPSSSPIEQMGLGWKYTYKTGKASDTYTSGFEVIWSSKPTKFGIQYLKFLLEFEWE 321          
BLAST of CN185121 vs. ExPASy Swiss-Prot
Match: KATG2_BURVG (Catalase-peroxidase 2 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=katG2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 83/350 (23.71%), Postives = 124/350 (35.43%), Query Frame = 1
Query:   61 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGS-IRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELLN------------------------------GESEGLLQLPTDKALLEDPEFRRYVELYAKDEDAFFRDYAASHKKLSELGFSP 762
            +I+  ++D+R  +          Y N  P  +R+AWH AGTY      GG  G+  R E   S   N  L  A      +K K+   I++ DL  L G VA+E  G  T  F  GR+D                S    K G+L                      PD    A  +R+ F RM ++D++ +AL +GGHT G+AH    P++                                SG +G W+ +P+ F   Y   LL                                +   L+   TD AL  DP + +  + + +  D F   +A +  KL+     P
Sbjct:   72 DIEAVKKDIRTTLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRTYDGRGGAGGAQQRFEPLNSWPDNANLDKARRLLWPIKKKYGQNISWGDLMVLTGNVALESMGFQTFGFGGGREDDWQSDLVYWGAGPKFMSNNRDKNGKLEKPLAATQMGLIYVNPEGPNGNPDPVAAAQDIREAFGRMAMNDEETLALIAGGHTFGKAHGAASPDKCVGVAPAGAGVEAQGLGWANKCGTGKGVDTITSGLEGAWSVDPVHFTMQYLDNLLGHDWVLTKSPAGAHQWMPKDAQSIVPDAHDPSKLHPLMMFTTDIALKVDPAYSKIAKRFEEHPDEFKLAFAKAWFKLTHRDLGP 421          
BLAST of CN185121 vs. ExPASy Swiss-Prot
Match: KATG2_BURCM (Catalase-peroxidase 2 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=katG2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 72/266 (27.07%), Postives = 102/266 (38.35%), Query Frame = 1
Query:   61 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGS-IRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELL 600
            +I+  ++D+RA +          Y N  P  +R+AWH AGTY      GG  G+  R E   S   N  L  A      +K K+   I++ DL  L G VA+E  G  T  F  GR+D                S    K G+L                      PD    A  +RD F RM ++D++ +AL +GGHT G+AH    P++                                SG +G W+ +P+ F   Y   LL
Sbjct:   72 DIEAVKKDIRATLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRTYDGRGGAGGAQQRFEPLNSWPDNANLDKARRLLWPIKKKYGENISWGDLMVLTGNVALESMGFQTFGFGGGREDDWQSDLVYWGAGTKFMSNNRDKNGKLEKPLAATQMGLIYVNPEGPNGNPDPVAAAKDIRDAFGRMAMNDEETLALIAGGHTFGKAHGAASPDKCVGAAPAGAGVEAQGLGWANKCGTGKGADTITSGLEGAWSVDPVHFTMQYLDNLL 337          
BLAST of CN185121 vs. ExPASy Swiss-Prot
Match: PEM4_PHACH (Manganese peroxidase H4 OS=Phanerochaete chrysosporium PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 67/264 (25.38%), Postives = 116/264 (43.94%), Query Frame = 1
Query:   79 RDLRALIAYKNC---APIMLRLAWHDAGTYDVNTKT---GGPNGSIRNEE--EYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAV-EVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRMG-LSDKDIVALSGGHTLGRAHPERSGFD-GPWTREPLKFDNSYFVELL-----------------------NGESEGLLQLPTDKALLEDPEFRRYVELYAKDEDAFFRDYAASHKKLSELGFSPGS 768
            +DL+  +   +C   A  ++RL +HDA     +      GG +GS+ +    E +  +N+G+  +++       KH  I+ ADL Q AG VA+    G P ++F+ GR ++ I   EG +P+ +     +   F   G  S  ++V+L   HT+ RA       D  P+   P  FD   F+E+L                       +G   G ++L +D AL  D     + + +  +++     + A+  KL+ LG S  S
Sbjct:   46 QDLQETLFQGDCGEDAHEVIRLTFHDAIAISQSLGPQAGGGADGSMLHFPTIEPNFSANSGIDDSVNNLLPFMQKHDTISAADLVQFAGAVALSNCPGAPRLEFMAGRPNTTIPAVEGLIPEPQDSVTKILQRFEDAGNFSPFEVVSLLASHTVARADKVDETIDAAPFDSTPFTFDTQVFLEVLLKGTGFPGSNNNTGEVMSPLPLGSGSDTGEMRLQSDFALARDERTACFWQSFVNEQEFMAASFKAAMAKLAILGHSRSS 309          
BLAST of CN185121 vs. ExPASy Swiss-Prot
Match: KATG2_BURA4 (Catalase-peroxidase 2 OS=Burkholderia ambifaria (strain MC40-6) GN=katG2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 71/266 (26.69%), Postives = 102/266 (38.35%), Query Frame = 1
Query:   61 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGS-IRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFVPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELL 600
            +I+  ++D+RA +          Y N  P  +R+AWH AGTY      GG  G+  R E   S   N  L  A      +K K+   I++ DL  L G VA+E  G  T  F  GR+D                S    K G+L                      PD    A  +R+ F RM ++D++ +AL +GGHT G+AH    P++                                SG +G W+ +P+ F   Y   LL
Sbjct:   72 DIEAVKKDIRATLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRTYDGRGGAGGAQQRFEPLNSWPDNANLDKARRLLWPIKKKYGQNISWGDLMVLTGNVALESMGFQTFGFGGGREDDWQSDLVYWGAGTKFMSDNRDKNGKLEKPLAATQMGLIYVNPEGPNGNPDPVAAAKDIREAFGRMAMNDEETLALIAGGHTFGKAHGAASPDKCVGAAPAGAGVEAQGLGWANKCGTGKGADTITSGLEGAWSVDPVHFTMQYLDNLL 337          
BLAST of CN185121 vs. ExPASy Swiss-Prot
Match: PEM1_PHACH (Manganese peroxidase 1 OS=Phanerochaete chrysosporium GN=MNP1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11
Identity = 66/264 (25.00%), Postives = 113/264 (42.80%), Query Frame = 1
Query:   79 RDLRALIAYKNC---APIMLRLAWHDAGTYDVNTKT---GGPNGSIR--NEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAV-EVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRM-GLSDKDIVALSGGHTLGRAHPERSGFD-GPWTREPLKFDNSYFVELL-----------------------NGESEGLLQLPTDKALLEDPEFRRYVELYAKDEDAFFRDYAASHKKLSELGFSPGS 768
            +DL+  I    C   A  ++RL +HDA     +      GG +GS+      E +  +NNG+  +++       KH  I+ ADL Q AG VA+    G P ++F+ GR +  I+  +G +P+ +     +   F    G +  ++V+L   H++ RA       D  P+   P  FD   F+E+L                       +G   G ++L +D AL  DP      + +  ++      + A+  KL+ LG +  S
Sbjct:   43 QDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAGGGADGSMLLFPTVEPNFSANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAVDGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARADKVDQTIDAAPFDSTPFTFDTQVFLEVLLKGVGFPGSANNTGEVASPLPLGSGSDTGEMRLQSDFALAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVLGHNRNS 306          
The following BLAST results are available for this feature:
BLAST of CN185121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
PER46_ARATH9.982e-1432.50Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
KATG_THELT1.304e-1327.56Catalase-peroxidase OS=Thermotoga lettingae (strai... [more]
KATG2_BURVG1.441e-1223.71Catalase-peroxidase 2 OS=Burkholderia vietnamiensi... [more]
KATG2_BURCM1.441e-1227.07Catalase-peroxidase 2 OS=Burkholderia ambifaria (s... [more]
PEM4_PHACH1.883e-1225.38Manganese peroxidase H4 OS=Phanerochaete chrysospo... [more]
KATG2_BURA45.477e-1226.69Catalase-peroxidase 2 OS=Burkholderia ambifaria (s... [more]
PEM1_PHACH1.594e-1125.00Manganese peroxidase 1 OS=Phanerochaete chrysospor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006M13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185121 ID=CN185121; Name=CN185121; organism=Citrus sinensis; type=EST; length=789bp
GAGGGTTACAGAAAAAGAGCTCCGATGGCTTTACCGGTCGTTGACACAGA
GTACCTGAAGGAGATCGACAAGGCTCGTCGCGATCTCCGCGCTCTTATCG
CTTACAAGAACTGTGCTCCAATCATGCTCCGTCTAGCGTGGCACGACGCG
GGAACATATGACGTGAACACGAAGACTGGTGGACCAAATGGCTCGATAAG
GAACGAAGAGGAGTACTCTCATGGCTCCAACAATGGCTTGAAAATCGCTC
TTGATTTTTGTGAGGAAGTGAAGGCTAAACATCCAAAAATAACATATGCA
GACCTATACCAGCTTGCGGGTGTTGTTGCAGTTGAGGTCACTGGAGGTCC
TACAGTCGACTTTGTTCCTGGTAGAAAGGATTCAAAAATTTCTCCCAAGG
AAGGGCGTCTTCCAGATGCCAAACGAGGTGCACCTCATCTGAGGGATATC
TTTTATCGGATGGGTCTGTCTGACAAGGATATAGTGGCACTCTCAGGGGG
CCATACTTTGGGAAGGGCACATCCAGAGAGATCAGGTTTTGACGGCCCTT
GGACCAGGGAGCCTCTGAAATTTGATAACTCATACTTTGTGGAGTTGCTG
AATGGGGAATCAGAAGGATTACTGCAACTTCCAACAGACAAGGCTTTATT
AGAAGACCCTGAGTTCCGTCGTTATGTTGAGTTGTATGCAAAGGATGAGG
ATGCATTCTTTAGAGATTATGCAGCATCACATAAGAAACTTTCAGAGCTA
GGGTTTTCACCCGGTTCTGGCTCCAAATCAACAGCAAAT
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