CN185118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_SHIB3 (Fatty acid oxidation complex subunit alpha OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=fadJ PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.041e-20 Identity = 65/209 (31.10%), Postives = 106/209 (50.72%), Query Frame = 1 Query: 136 MEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747 + V D +AIIT+ P +N L + ++ ++ +++ +V ++ F G DIN+ A + + +L+ I P+ + CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+V A+++A + +P R L Sbjct: 9 LNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPL 212
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_SHEON (Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis GN=fadJ PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.041e-20 Identity = 66/204 (32.35%), Postives = 101/204 (49.51%), Query Frame = 1 Query: 151 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747 DG+AI+T+ P +N L + + E ++ +VL +G F G DI++ AGD + +V N +E P+ + CH R+ + KT LG+PE+ LG++PG GGTQRLPRLVG++ A++MML K I ++ K+GL++ VV LL+ + AL KP +SL Sbjct: 14 DGIAILTMDVPGETMNTLKAEFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQTAGDAKALSQQG-HVVFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKQIAKPVKKSL 216
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_ECOL6 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O6 GN=fadJ PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.041e-20 Identity = 64/209 (30.62%), Postives = 105/209 (50.24%), Query Frame = 1 Query: 136 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747 + V D +A+IT+ P +N L + ++ ++ D++ +V ++ F G DIN+ A + + +L+ I P+ + CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+ A+++A + +P R L Sbjct: 9 LNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKDLRGVVFISAKPDNFIAGADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPL 212
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_ECOSE (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain SE11) GN=fadJ PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.195e-20 Identity = 65/209 (31.10%), Postives = 106/209 (50.72%), Query Frame = 1 Query: 136 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747 + V D +AIIT+ P +N L + ++ ++ +++ +V ++ F G DIN+ A + + +L+ I P+ + CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+V A+++A + +P R L Sbjct: 9 LNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPL 212
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_ECO24 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.195e-20 Identity = 65/209 (31.10%), Postives = 106/209 (50.72%), Query Frame = 1 Query: 136 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747 + V D +AIIT+ P +N L + ++ ++ +++ +V ++ F G DIN+ A + + +L+ I P+ + CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+V A+++A + +P R L Sbjct: 9 LNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPL 212
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_ECO8A (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O8 (strain IAI1) GN=fadJ PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.201e-19 Identity = 64/209 (30.62%), Postives = 106/209 (50.72%), Query Frame = 1 Query: 136 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747 + V D +A+IT+ P +N L + ++ ++ +++ +V ++ F G DIN+ A + + +L+ I P+ + CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+V A+++A + +P R L Sbjct: 9 LNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPL 212
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_ECO55 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain 55989 / EAEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.201e-19 Identity = 64/209 (30.62%), Postives = 106/209 (50.72%), Query Frame = 1 Query: 136 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747 + V D +A+IT+ P +N L + ++ ++ +++ +V ++ F G DIN+ A + + +L+ I P+ + CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+V A+++A + +P R L Sbjct: 9 LNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPL 212
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_SHISS (Fatty acid oxidation complex subunit alpha OS=Shigella sonnei (strain Ss046) GN=fadJ PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.049e-19 Identity = 64/209 (30.62%), Postives = 105/209 (50.24%), Query Frame = 1 Query: 136 MEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747 + V D +AIIT+ P +N L + ++ ++ +++ +V ++ F G DIN+ A + + +L+ I P+ + CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+ A+++A + +P R L Sbjct: 9 LNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPL 212
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_SHIFL (Fatty acid oxidation complex subunit alpha OS=Shigella flexneri GN=fadJ PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.049e-19 Identity = 64/209 (30.62%), Postives = 105/209 (50.24%), Query Frame = 1 Query: 136 MEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747 + V D +AIIT+ P +N L + ++ ++ +++ +V ++ F G DIN+ A + + +L+ I P+ + CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+ A+++A + +P R L Sbjct: 9 LNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPL 212
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_SHIF8 (Fatty acid oxidation complex subunit alpha OS=Shigella flexneri serotype 5b (strain 8401) GN=fadJ PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.049e-19 Identity = 64/209 (30.62%), Postives = 105/209 (50.24%), Query Frame = 1 Query: 136 MEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747 + V D +AIIT+ P +N L + ++ ++ +++ +V ++ F G DIN+ A + + +L+ I P+ + CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+ A+++A + +P R L Sbjct: 9 LNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAE-INALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPL 212 The following BLAST results are available for this feature:
BLAST of CN185118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185118 ID=CN185118; Name=CN185118; organism=Citrus sinensis; type=EST; length=784bpback to top |