CN185118

Overview
NameCN185118
Unique NameCN185118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2460 contig Csv1_Contig2460:1..784. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_SALEP (Fatty acid oxidation complex subunit alpha OS=Salmonella enteritidis PT4 (strain P125109) GN=fadJ PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.468e-17
Identity = 63/210 (30.00%), Postives = 102/210 (48.57%), Query Frame = 1
Query:  133 MMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747
            M+ V  D VA++ +  P   VN L     A ++   ++      ++ +V ++     F  G DIN+      A +   +     +L+   I+    P+                + CH RI     KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L
Sbjct:    8 MLNVRLDNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTL 212          
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_SALDC (Fatty acid oxidation complex subunit alpha OS=Salmonella dublin (strain CT_02021853) GN=fadJ PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.468e-17
Identity = 63/210 (30.00%), Postives = 102/210 (48.57%), Query Frame = 1
Query:  133 MMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747
            M+ V  D VA++ +  P   VN L     A ++   ++      ++ +V ++     F  G DIN+      A +   +     +L+   I+    P+                + CH RI     KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L
Sbjct:    8 MLNVRLDNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTL 212          
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_SALCH (Fatty acid oxidation complex subunit alpha OS=Salmonella choleraesuis GN=fadJ PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.468e-17
Identity = 63/210 (30.00%), Postives = 102/210 (48.57%), Query Frame = 1
Query:  133 MMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747
            M+ V  D VA++ +  P   VN L     A ++   ++      ++ +V ++     F  G DIN+      A +   +     +L+   I+    P+                + CH RI     KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L
Sbjct:    8 MLNVRLDNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTL 212          
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_SALA4 (Fatty acid oxidation complex subunit alpha OS=Salmonella agona (strain SL483) GN=fadJ PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.468e-17
Identity = 63/210 (30.00%), Postives = 102/210 (48.57%), Query Frame = 1
Query:  133 MMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747
            M+ V  D VA++ +  P   VN L     A ++   ++      ++ +V ++     F  G DIN+      A +   +     +L+   I+    P+                + CH RI     KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L
Sbjct:    8 MLNVRLDNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTL 212          
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADB_ECO24 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.468e-17
Identity = 60/208 (28.85%), Postives = 99/208 (47.60%), Query Frame = 1
Query:  151 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVS-VELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL-------WALDIAARRKPWIRSL 747
            DG+A +    P  VN L    VA L +       + D+K ++L  N   F  G DI  F  +    +  L   +     V N +ED   P                 +    R+A P  ++GLPE  LG++PGFGG+ R+PR++G   A+E++   K + +++  K+GL+D VV +E+L++ ++          LD  A+R+P +  L
Sbjct:   15 DGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLQFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPL 222          
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_PHOLL (Fatty acid oxidation complex subunit alpha OS=Photorhabdus luminescens subsp. laumondii GN=fadJ PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.917e-17
Identity = 59/190 (31.05%), Postives = 98/190 (51.58%), Query Frame = 1
Query:  139 EVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 693
            +V  D + IIT+  P   VN L    V    + F++A     +K ++L +G    F  G DI++        D   + +   +L  + I +   P+                + CH R+ +   KT+LGLPE+ LG++PG GGTQRLPRL+G+S A+++ML  K + +++  +LGL+D  V  + LL ++
Sbjct:   25 DVRPDKIGIITINVPGEKVNTLKAEFVDQFLNVFKQAQQSSGLKGLILISGKPDTFIAGADISMIAGCKTKEDARDLAEKGQKLF-SQIANYPLPVVAAIHGACLGGGLELALACHWRVCSQDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSSALDIMLTGKQLRAKQALRLGLVDDAVPLDILLDIA 213          
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_ENTS8 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.917e-17
Identity = 63/215 (29.30%), Postives = 102/215 (47.44%), Query Frame = 1
Query:  136 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL 765
            +++  D VA++T+  P   +N L       ++   +      D+  +V ++     F  G DIN+      A +   +     +++   I      +                + CH+RI     KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L  K +   +  K GL+D VV    LL+     A ++A +R+P  R L   ++L
Sbjct:    9 LQMRPDNVAVVTIDVPGEKMNTLKAEFARDVRAIVKTLRENRDLAGVVFISAKPDNFIAGADINMIAHCQSAQEAEALASQGQQIMAE-IRALPVHVVAAIHGACLGGGLELALACHSRICTDDVKTLLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILAGKQLRPRQALKAGLVDDVVPQSILLEA----AAELAKKRRPAPRRLPVRERL 218          
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADJ_ENT38 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sp. (strain 638) GN=fadJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.917e-17
Identity = 58/209 (27.75%), Postives = 101/209 (48.33%), Query Frame = 1
Query:  136 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 747
            + V  D +A++T+  P   +N L       ++   ++     +++ ++ ++     F  G DIN+  +   A +   +     +++   I     P+                + CH+R+     KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L  K +   +  K+GL+D VV    LL      A+++A + +   R L
Sbjct:    9 LNVRLDNIAVVTIDVPGEKMNTLKAEFGVQVRSILKQVRDNKNIRGLIFISAKSDNFIAGADINMIARAKSAQEAEELARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHSRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRPRQALKVGLVDEVVPHSILLTA----AVELAQKERQASRHL 212          
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADB_SHISS (Fatty acid oxidation complex subunit alpha OS=Shigella sonnei (strain Ss046) GN=fadB PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.917e-17
Identity = 60/208 (28.85%), Postives = 99/208 (47.60%), Query Frame = 1
Query:  151 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVS-VELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL-------WALDIAARRKPWIRSL 747
            DG+A +    P  VN L    VA L +       + D+K ++L  N   F  G DI  F  +    +  L   +     V N +ED   P                 +    R+A P  ++GLPE  LG++PGFGG+ R+PR++G   A+E++   K + +++  K+GL+D VV +E+L++ ++          LD  A+R+P +  L
Sbjct:   15 DGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPL 222          
BLAST of CN185118 vs. ExPASy Swiss-Prot
Match: FADB_SHIB3 (Fatty acid oxidation complex subunit alpha OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=fadB PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.917e-17
Identity = 60/208 (28.85%), Postives = 99/208 (47.60%), Query Frame = 1
Query:  151 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVS-VELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL-------WALDIAARRKPWIRSL 747
            DG+A +    P  VN L    VA L +       + D+K ++L  N   F  G DI  F  +    +  L   +     V N +ED   P                 +    R+A P  ++GLPE  LG++PGFGG+ R+PR++G   A+E++   K + +++  K+GL+D VV +E+L++ ++          LD  A+R+P +  L
Sbjct:   15 DGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPL 222          
The following BLAST results are available for this feature:
BLAST of CN185118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 233
Match NameE-valueIdentityDescription
FADJ_SALEP1.468e-1730.00Fatty acid oxidation complex subunit alpha OS=Salm... [more]
FADJ_SALDC1.468e-1730.00Fatty acid oxidation complex subunit alpha OS=Salm... [more]
FADJ_SALCH1.468e-1730.00Fatty acid oxidation complex subunit alpha OS=Salm... [more]
FADJ_SALA41.468e-1730.00Fatty acid oxidation complex subunit alpha OS=Salm... [more]
FADB_ECO241.468e-1728.85Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_PHOLL1.917e-1731.05Fatty acid oxidation complex subunit alpha OS=Phot... [more]
FADJ_ENTS81.917e-1729.30Fatty acid oxidation complex subunit alpha OS=Ente... [more]
FADJ_ENT381.917e-1727.75Fatty acid oxidation complex subunit alpha OS=Ente... [more]
FADB_SHISS1.917e-1728.85Fatty acid oxidation complex subunit alpha OS=Shig... [more]
FADB_SHIB31.917e-1728.85Fatty acid oxidation complex subunit alpha OS=Shig... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006M11_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006M11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185118 ID=CN185118; Name=CN185118; organism=Citrus sinensis; type=EST; length=784bp
GAGGAATTACCTCACGTAAACCACCGTTGTATCTTGTATGTCCTCCATTT
TTCTATTCGGATTGATAGCAAAATCTCCACTAAAAGAAATAATTGATAAT
AATAACAGTAAGCCATGGCAGCACCGCGAGTGATGATGGAAGTCGGAAAC
GACGGCGTTGCGATCATCACTTTGATTAATCCTCCCGTGAACGCCTTAGC
TATTCCAATTGTTGCCGGATTGAAGGACAAGTTTGAGGAGGCCACGAGCC
GAGACGACGTTAAGGCTATTGTTCTGACTGGCAATGGTGGAAGGTTTTCT
GGCGGTTTCGACATAAATGTTTTTCAGAAGGTTCACGGGGCTGGGGATGT
TTCGCTGATGCCCGATGTATCGGTTGAACTTGTTGTCAACTTAATTGAAG
ATTGCAAGAAGCCCATTGTTGCAGCTGTGGAGGGGTTAGCCCTTGGAGGT
GGCTTAGAATTGGCAATGGGATGCCATGCACGTATTGCTGCTCCAAAGAC
TCAACTTGGCTTGCCTGAGCTGACACTAGGGGTAATTCCAGGTTTTGGAG
GCACACAACGTCTACCAAGGCTGGTGGGCCTCTCAAAGGCTATTGAAATG
ATGCTGTTATCTAAATCAATCACGTCTGAGGAGGGCTGGAAGCTGGGTCT
AATTGATGCTGTTGTGACTTCTGAAGAGTTGCTGAAAGTATCTCGACTCT
GGGCTTTAGACATTGCAGCAAGGCGCAAACCATGGATACGTTCCCTTCAC
AGGACAGACAAACTTGGTTCTCTTTCTGAAGCAA
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