CN185107
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185107 vs. ExPASy Swiss-Prot
Match: GRC10_ORYSJ (Glutaredoxin-C10 OS=Oryza sativa subsp. japonica GN=GRXC10 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.046e-18 Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 171 VEKMLVENAVLVLGRPGCCMCHVVKTLLLGH-GVNPAVFEVADGDEAAVLD-ELSRIDVENGGGIIQFPAVFVGGKLFGGLDRVMATHISGDLVPILKEAGALWL 479 V K+ E AV+V C MCH V +LL+G GVN AV E+ ++ EL+R GGG PAVFVGG L GG +RVM+ H++G+LVP+LK AGALWL Sbjct: 4 VAKLASERAVVVFTASNCGMCHAVTSLLVGELGVNAAVHELDKDPRGRDMERELARRLNGGGGGGRALPAVFVGGNLVGGANRVMSLHLAGELVPMLKNAGALWL 108
BLAST of CN185107 vs. ExPASy Swiss-Prot
Match: GRXS2_ARATH (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana GN=GRXS2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.050e-17 Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 171 VEKMLVENAVLVLGRPGCCMCHVVKTLLLGHGVNPAVFEVADGDEAAVLDELSR-IDVENG----GGIIQFPAVFVGGKLFGGLDRVMATHISGDLVPILKEAGALWL 479 + KM++E V++ + CCM H +KTLL G NPAV+E LDE+SR ++E G P VF+GG+L GG + VM+ H++G L+P+LK AGALW+ Sbjct: 4 ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYE---------LDEISRGREIEQALLRLGCSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102
BLAST of CN185107 vs. ExPASy Swiss-Prot
Match: GRXS3_ARATH (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana GN=GRXS3 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.678e-17 Identity = 46/110 (41.82%), Postives = 70/110 (63.64%), Query Frame = 3 Query: 165 KSVEKMLVENAVLVLGRPGCCMCHVVKTLLLGHGVNPAVFEVADGDEAAVLDELSR-IDVENG----GGIIQFPAVFVGGKLFGGLDRVMATHISGDLVPILKEAGALWL 479 ++++KM+ E +V++ + CCM H +KTL L GVNP ++E LDE+SR ++E+ G P VF+GG+L GG ++VM+ H++ LVP+LK AGALWL Sbjct: 2 ENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYE---------LDEISRGKEIEHALAQLGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102
BLAST of CN185107 vs. ExPASy Swiss-Prot
Match: GRXS5_ARATH (Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana GN=GRXS5 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.497e-17 Identity = 43/105 (40.95%), Postives = 68/105 (64.76%), Query Frame = 3 Query: 165 KSVEKMLVENAVLVLGRPGCCMCHVVKTLLLGHGVNPAVFEVADGDEAAVLDELSRIDVENGGGIIQFPAVFVGGKLFGGLDRVMATHISGDLVPILKEAGALWL 479 ++++KM+ E +V++ + CCM H +KTL L GVNP ++E+ DE + E+ + + G P VF+GG+L GG ++VM+ H++ LVP+LK AGALWL Sbjct: 2 ENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYEL---DEINIGREIEQALAQLGCSPT-VPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102
BLAST of CN185107 vs. ExPASy Swiss-Prot
Match: GRXC6_ARATH (Glutaredoxin-C6 OS=Arabidopsis thaliana GN=GRXC6 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.736e-16 Identity = 48/124 (38.71%), Postives = 73/124 (58.87%), Query Frame = 3 Query: 117 SSARGGGVTEEADTAAKSVEKMLVENAVLVLGRPGCCMCHVVKTLLLGHGVNPAVFEVADGDEAAVLDELSRIDVENGGGIIQF---PAVFVGGKLFGGLDRVMATHISGDLVPILKEAGALWL 479 +S+ + EE T AK + +++ E+ V++ R CCMCHV+K LL GV P V E+ D + +++ L E GG+ PAVF+G + GGL+ ++A H+SG LVP L + GALW+ Sbjct: 25 TSSTSLSIDEEESTEAK-IRRLISEHPVIIFSRSSCCMCHVMKRLLATIGVIPTVIELDDHEVSSLPTALQD---EYSGGVSVVGPPPAVFIGRECVGGLESLVALHLSGQLVPKLVQVGALWV 144
BLAST of CN185107 vs. ExPASy Swiss-Prot
Match: GRXS4_ARATH (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana GN=GRXS4 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.866e-16 Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 171 VEKMLVENAVLVLGRPGCCMCHVVKTLLLGHGVNPAVFEVADGDEAAVLDELSR-IDVENG----GGIIQFPAVFVGGKLFGGLDRVMATHISGDLVPILKEAGALWL 479 ++KM+ E +V++ + CCM H +KTL + GVNP ++E LDE++R ++E G P VF+GG+L GG ++VM+ H++ LVP+LK GALWL Sbjct: 4 LQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYE---------LDEINRGKEIEQALAQLGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102
BLAST of CN185107 vs. ExPASy Swiss-Prot
Match: GRXC2_ORYSJ (Putative glutaredoxin-C2 OS=Oryza sativa subsp. japonica GN=GRXC2 PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 3.866e-16 Identity = 48/106 (45.28%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 162 AKSVEKMLVENAVLVLGRPGCCMCHVVKTLLLGHGVNPAVFEVADGDEAAVLDELSRIDVENGGGIIQFPAVFVGGKLFGGLDRVMATHISGDLVPILKEAGALWL 479 A+ V ++ + AV++ G C MCHVVKTL GV+ AV EV D+ ++ R G PAVF+GGKL G D+VM+ H++G LVP+L+EAGALWL Sbjct: 2 AERVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEV---DKDPNGKDVERALAGMVGRTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
BLAST of CN185107 vs. ExPASy Swiss-Prot
Match: GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1.1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.866e-16 Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 3 Query: 171 VEKMLVENAVLVLGRPGCCMCHVVKTLLLGHGVNPAVFEVADGDEAAVLDELSRIDVENGGGIIQFPAVFVGGKLFGGLDRVMATHISGDLVPILKEAGALWL 479 V ++ + AV++ CCMCH V L GVNP V E+ DE E+ + G PAVF+GG+L G D+VM+ H+SG+LVP+L+ AGALW+ Sbjct: 4 VNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVEL---DEDPRGKEMEKALARLLGRSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103
BLAST of CN185107 vs. ExPASy Swiss-Prot
Match: GRC11_ORYSJ (Putative glutaredoxin-C11 OS=Oryza sativa subsp. japonica GN=GRXC11 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.050e-16 Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 162 AKSVEKMLVENAVLVLGRPGCCMCHVVKTLLLGHGVNPAVFEVADGDEAAVLDE--LSRIDVENGGGIIQFPAVFVGGKLFGGLDRVMATHISGDLVPILKEAGALWL 479 A+ V ++ E AV+V + GCCMC V TLL V+ AV E+ +++ R+ +G G PAVF+GG L GG +VMA H+ G+LVP+LK AGALWL Sbjct: 2 AEMVARLASERAVVVFTKSGCCMCTAVTTLLGELAVSAAVHELDRDPLGKEMEKELARRLYGSSGRGGPAVPAVFIGGSLVGGTSKVMAMHLKGELVPLLKSAGALWL 109
BLAST of CN185107 vs. ExPASy Swiss-Prot
Match: GRC10_ARATH (Glutaredoxin-C10 OS=Arabidopsis thaliana GN=GRXC10 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.613e-16 Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 3 Query: 93 PAVAAGNTSSARGGGVTEEADTAAKSVEKMLVENAVLVLGR-PGCCMCHVVKTLLLGHGVNPAVFEVADGDEAAVLDELSRIDVENGGGIIQFPAVFVGGKLFGGLDRVMATHISGDLVPILKEAGALW 476 PA + ++S+A +E +T+ + +++ E+ V++ R CCMCHV+K LL GV+P V E+ DG+ A + E + P +F+GG GG + ++A H+SG L+P L E GALW Sbjct: 32 PAPSTVSSSTASTSLSFDEEETSESKIGRLISEHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLAVEAA-------------PVLFIGGTCVGGFESLVALHLSGQLIPRLVEVGALW 147 The following BLAST results are available for this feature:
BLAST of CN185107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185107 ID=CN185107; Name=CN185107; organism=Citrus sinensis; type=EST; length=605bpback to top |