CN185107

Overview
NameCN185107
Unique NameCN185107
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN185107 vs. ExPASy Swiss-Prot
Match: GRC11_ARATH (Glutaredoxin-C11 OS=Arabidopsis thaliana GN=GRXC11 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.343e-11
Identity = 32/97 (32.99%), Postives = 52/97 (53.61%), Query Frame = 3 
Query:  189 ENAVLVLGRPGCCMCHVVKTLLLGHGVNPAVFEVADGDEAAVLDELSRIDVENGGGIIQFPAVFVGGKLFGGLDRVMATHISGDLVPILKEAGALWL 479
            + A ++  +  CCMCH +KTL    G +PA+ E+    E   ++   R    +   +   PAVFVGG+  G    +++ H+ G L  +LK+A A+WL
Sbjct:   10 KKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALGSSNPAV---PAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIWL 103
The following BLAST results are available for this feature:
BLAST of CN185107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
GRC11_ARATH8.343e-1132.99Glutaredoxin-C11 OS=Arabidopsis thaliana GN=GRXC11... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006M04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006M04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185107 ID=CN185107; Name=CN185107; organism=Citrus sinensis; type=EST; length=605bp
GAGGCCCACATCTTTCAGAAAAATCAATCTTTGTGCATAAATTAAACAAT
TCCATGCAAGAAGCAATTCCCTATAGAACATATATTCACGGCCCCGCCGT
CGCCGCCGGCAACACGTCATCGGCGCGCGGTGGTGGTGTCACTGAAGAAG
CGGATACCGCTGCAAAAAGTGTGGAAAAGATGCTGGTCGAGAATGCAGTG
TTGGTACTTGGGAGACCCGGGTGTTGCATGTGCCATGTCGTGAAAACGTT
GCTGCTGGGGCACGGTGTGAACCCTGCGGTGTTCGAGGTGGCCGATGGTG
ATGAAGCTGCTGTTCTTGATGAATTGTCGAGAATTGATGTCGAAAACGGT
GGTGGGATTATACAATTTCCGGCCGTTTTTGTCGGAGGGAAGTTGTTTGG
TGGATTGGATCGGGTAATGGCTACACATATTTCCGGCGATTTGGTGCCTA
TTTTGAAAGAGGCCGGGGCTTTGTGGCTATGATCTATCCTCTGCCTCTTC
CTCCATTAATTTTATCTCGATTTCCTTTCTGTCTTTGATGAATGTAGTTA
TGTAGACCATGTAATTCTTCTATGGATCAATATCAAGTTTTCGTGTATTA
ATTAA
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