CN185104

Overview
NameCN185104
Unique NameCN185104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2771 contig Csv1_Contig2771:41..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSJ (Fructokinase-2 OS=Oryza sativa subsp. japonica GN=FRK2 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 5.625e-68
Identity = 122/198 (61.62%), Postives = 147/198 (74.24%), Query Frame = 3
Query:   24 SGAYDRLVVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV 617
            + A   LVV FGEMLIDFVP V GVSL                    IS+LGGSSAFVGK GDDEFG+ML +ILK+N V+  G  +D  ARTALAFVTL+++GEREF+F+R+PSADMLL E+EL+ +LI++  IFHYGSISLI EPCRS  +AAM  AK +G + SYDPN+RLPLWPSE+AAR GI+SIW +AD IKV
Sbjct:   12 AAAEPNLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAISKLGGSSAFVGKFGDDEFGHMLVDILKKNGVNAEGCLFDEHARTALAFVTLKSNGEREFMFYRNPSADMLLTEAELNLDLIRRAKIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSEDAARAGILSIWKEADFIKV 209          

HSP 2 Score: 35.8094 bits (81), Expect = 5.625e-68
Identity = 19/35 (54.29%), Postives = 25/35 (71.43%), Query Frame = 1
Query:  619 SDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVT 723
            SDDE+ FLT GD +++ NV+   L+   LKLLIVT
Sbjct:  210 SDDEVAFLTQGDANDEKNVL--SLWFDGLKLLIVT 242          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSI (Fructokinase-2 OS=Oryza sativa subsp. indica GN=FRK2 PE=1 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 5.625e-68
Identity = 122/198 (61.62%), Postives = 147/198 (74.24%), Query Frame = 3
Query:   24 SGAYDRLVVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV 617
            + A   LVV FGEMLIDFVP V GVSL                    IS+LGGSSAFVGK GDDEFG+ML +ILK+N V+  G  +D  ARTALAFVTL+++GEREF+F+R+PSADMLL E+EL+ +LI++  IFHYGSISLI EPCRS  +AAM  AK +G + SYDPN+RLPLWPSE+AAR GI+SIW +AD IKV
Sbjct:   12 AAAEPNLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAISKLGGSSAFVGKFGDDEFGHMLVDILKKNGVNAEGCLFDEHARTALAFVTLKSNGEREFMFYRNPSADMLLTEAELNLDLIRRAKIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSEDAARAGILSIWKEADFIKV 209          

HSP 2 Score: 35.8094 bits (81), Expect = 5.625e-68
Identity = 19/35 (54.29%), Postives = 25/35 (71.43%), Query Frame = 1
Query:  619 SDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVT 723
            SDDE+ FLT GD +++ NV+   L+   LKLLIVT
Sbjct:  210 SDDEVAFLTQGDANDEKNVL--SLWFDGLKLLIVT 242          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: SCRK3_ARATH (Probable fructokinase-3 OS=Arabidopsis thaliana GN=At1g06020 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 9.563e-68
Identity = 126/204 (61.76%), Postives = 148/204 (72.55%), Query Frame = 3
Query:    6 ASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV 617
            AS  G  G    L+V FGEMLIDFVPTV GVSL                    +SRLGG +AFVGKLGDD+FG+MLA IL++N VD  G+ +D  ARTALAFVTLR+DGEREF+F+R+PSADMLL   EL+  LI+   +FHYGSISLI EPCRS  + AM +AKE+G++LSYDPNLR PLWPS E AR  IMSIWD+ADIIKV
Sbjct:    2 ASSTGEKG----LIVSFGEMLIDFVPTVSGVSLSESPGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDDFGHMLAGILRKNGVDDQGINFDEGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARTQIMSIWDKADIIKV 201          

HSP 2 Score: 31.5722 bits (70), Expect = 9.563e-68
Identity = 17/35 (48.57%), Postives = 22/35 (62.86%), Query Frame = 1
Query:  619 SDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVT 723
            SD E+ FLT     +D   +   L+HPNLKLL+VT
Sbjct:  202 SDVELEFLTENKTMDDKTAM--SLWHPNLKLLLVT 234          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: SCRK_SOLTU (Fructokinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 7.294e-65
Identity = 116/187 (62.03%), Postives = 134/187 (71.66%), Query Frame = 3
Query:   21 GSGAYDRLVVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 581
            GS     L+V FGEMLIDFVPTV GVSL                    ++RLGG SAFVGKLGDDEFG+MLA ILK N V   G+ +D  ARTALAFVTLRADGEREF+F+R+PSADMLL   EL+ +LI+   +FHYGSISLI EPCRS  L AM +AKE+G++LSYDPNLRLPLW SE  AR+ I
Sbjct:    5 GSALSSGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGKSAFVGKLGDDEFGHMLAGILKTNGVQADGINFDKGARTALAFVTLRADGEREFMFYRNPSADMLLTPDELNLDLIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWSSEAEARKAI 191          

HSP 2 Score: 38.5058 bits (88), Expect = 7.294e-65
Identity = 19/35 (54.29%), Postives = 26/35 (74.29%), Query Frame = 1
Query:  619 SDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVT 723
            SD E+ FLTG D  +D++ +   L+HPNLKLL+VT
Sbjct:  194 SDVELEFLTGSDKIDDESAM--SLWHPNLKLLLVT 226          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: YDJE_BACSU (Uncharacterized sugar kinase ydjE OS=Bacillus subtilis GN=ydjE PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 8.374e-27
Identity = 68/170 (40.00%), Postives = 96/170 (56.47%), Query Frame = 3
Query:   45 VVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGS-ISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLW 551
            VVC GE+LIDF  T   V L                    I++LGG +AF GK+G D FGY L   L   +VDTS +  D  A T LAFV+L+ +GER+F+F R   AD L    ++D+  + +  I H+GS  +L+++P  S  L  M++AK++G  +S+DPN R  LW
Sbjct:    6 VVCIGELLIDFFCTDVDVDLMEGRQFLKSAGGAPANVSAAIAKLGGDAAFSGKVGKDPFGYFLKRTLDAVHVDTSMLVMDEKAPTTLAFVSLKQNGERDFVFNR--GADALFTLEDIDQEKLNEAKILHFGSATALLSDPFCSAYLRLMSIAKDNGQFISFDPNYREDLW 173          

HSP 2 Score: 20.7866 bits (42), Expect = 8.374e-27
Identity = 7/24 (29.17%), Postives = 14/24 (58.33%), Query Frame = 1
Query:  619 SDDEITFLTGGDDHNDDNVVLEKL 690
            SD+E+  ++G  DH     +L ++
Sbjct:  197 SDEELEIISGVKDHEKGVAILHEI 220          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: SCRK_KLEPN (Fructokinase OS=Klebsiella pneumoniae GN=scrK PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.254e-24
Identity = 59/151 (39.07%), Postives = 84/151 (55.63%), Query Frame = 3
Query:  165 ISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV 617
            ++RLGG S F+G++GDD FG  + + L +  VD + +R D+  RT+   V L + GER F F   PSAD+ L   +L       G   H  SI+L AEP RST  AA+   K +G  +S+DPN+R  LW   +  R+ +      AD IK+
Sbjct:   38 VARLGGDSGFIGRVGDDPFGRFMRHTLAQEQVDVNYMRLDAAQRTSTVVVDLDSHGERTFTFMVRPSADLFLQPEDLPP--FAAGQWLHVCSIALSAEPSRSTTFAALEAIKRAGGYVSFDPNIRSDLWQDPQDLRDCLDRALALADAIKL 186          

HSP 2 Score: 23.8682 bits (50), Expect = 1.254e-24
Identity = 11/32 (34.38%), Postives = 17/32 (53.12%), Query Frame = 1
Query:  619 SDDEITFLTGGDDHNDDNVVLEKLFHPNLKLL 714
            S++E+ F++G DD       L   F P L L+
Sbjct:  187 SEEELAFISGSDDIVSGIARLNARFQPTLLLV 218          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: SCRK_ECOLX (Fructokinase OS=Escherichia coli GN=cscK PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.852e-22
Identity = 56/151 (37.09%), Postives = 83/151 (54.97%), Query Frame = 3
Query:  165 ISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV 617
            I+RLGG+S F+G++GDD FG ++   L    VD + ++ D   RT+   V L   GER F F   PSAD+ L  ++L     + G   H  SI+L AEP R++   AM   + +G  +S+DPN+R  LW  E   R  +      AD++K+
Sbjct:   38 IARLGGTSGFIGRVGDDPFGALMQRTLLTEGVDITYLKQDEWHRTSTVLVDLNDQGERSFTFMVRPSADLFLETTDLP--CWRHGEWLHLCSIALSAEPSRTSAFTAMTAIRHAGGFVSFDPNIREDLWQDEHLLRLCLRQALQLADVVKL 186          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: SCRK_VIBAL (Fructokinase OS=Vibrio alginolyticus GN=scrK PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.582e-22
Identity = 60/150 (40.00%), Postives = 80/150 (53.33%), Query Frame = 3
Query:  165 ISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIK 614
            I+RL G SAF G++GDD FG  + +IL +  V T  +  D   RT+   V L   GER F F   PSAD  +  S  D    KQG   H  SISL  EP RS+   A+  AK +G  +S+DPNLR  +W  +   +  +M     AD++K
Sbjct:   37 IARLSGKSAFFGRVGDDPFGRFMQSILDQEGVCTEFLIKDPEQRTSTVVVDLDDQGERSFTFMVKPSADQFM--SVEDMGNFKQGDWLHVCSISLANEPSRSSTFEAIKRAKAAGGFISFDPNLRDEVWQDQSEIQAVVMKAVAMADVVK 184          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: SCRK_SALTY (Fructokinase OS=Salmonella typhimurium GN=scrK PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.259e-21
Identity = 56/151 (37.09%), Postives = 82/151 (54.30%), Query Frame = 3
Query:  165 ISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV 617
            ++RLGG+S F+G +G D FG  + + L++  VD S +  D   RT+   V L   GER F F   PSAD+ L E +L +     G   H  SI+L AEP RST  AAM   + +G  +S+DPN+R  LW  +      +      A+++K+
Sbjct:   38 VARLGGNSGFIGAVGGDPFGRYMRHTLQQEQVDVSHMYLDDQHRTSTVVVDLDDQGERTFTFMVRPSADLFLVEEDLPQ--FAAGQWLHVCSIALSAEPSRSTTFAAMESIRSAGGRVSFDPNIRPDLWQDQALLLACLDRALHMANVVKL 186          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: Y1459_PYRHO (Uncharacterized sugar kinase PH1459 OS=Pyrococcus horikoshii GN=PH1459 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.327e-14
Identity = 55/195 (28.21%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   42 LVVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQ----ADIIK 614
            ++   GE+LID +    G  L                    +SRLG  S+ + K+G+D FG  L   L + NVDT G+  D    T + FV L+       L+      +M L  ++++ +++++  I ++GS+ L   P R T +  +   K S S++++D NLRL LW  +E   E ++ + ++    ADI+K
Sbjct:    7 MIASIGELLIDLISVEEG-DLKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKGASPSFLLYDDVAYFNMTL--NDINWDIVEEAKIVNFGSVILARNPSRETVMKVIKKIKGS-SLIAFDVNLRLDLWRGQE---EEMIKVLEESIKLADIVK 194          
The following BLAST results are available for this feature:
BLAST of CN185104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
SCRK2_ORYSJ5.625e-6861.62Fructokinase-2 OS=Oryza sativa subsp. japonica GN=... [more]
SCRK2_ORYSI5.625e-6861.62Fructokinase-2 OS=Oryza sativa subsp. indica GN=FR... [more]
SCRK3_ARATH9.563e-6861.76Probable fructokinase-3 OS=Arabidopsis thaliana GN... [more]
SCRK_SOLTU7.294e-6562.03Fructokinase OS=Solanum tuberosum PE=2 SV=1[more]
YDJE_BACSU8.374e-2740.00Uncharacterized sugar kinase ydjE OS=Bacillus subt... [more]
SCRK_KLEPN1.254e-2439.07Fructokinase OS=Klebsiella pneumoniae GN=scrK PE=3... [more]
SCRK_ECOLX3.852e-2237.09Fructokinase OS=Escherichia coli GN=cscK PE=3 SV=2[more]
SCRK_VIBAL8.582e-2240.00Fructokinase OS=Vibrio alginolyticus GN=scrK PE=3 ... [more]
SCRK_SALTY4.259e-2137.09Fructokinase OS=Salmonella typhimurium GN=scrK PE=... [more]
Y1459_PYRHO1.327e-1428.21Uncharacterized sugar kinase PH1459 OS=Pyrococcus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006M02_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185104 ID=CN185104; Name=CN185104; organism=Citrus sinensis; type=EST; length=725bp
TTTCTGCTAGTATGGATGGAGGGTCTGGAGCTTATGATCGGCTAGTTGTT
TGCTTTGGGGAAATGTTGATCGATTTTGTTCCAACTGTTGGAGGGGTTTC
ACTTGCTGAAGCACCTGCTTTCAAGAAGGCTCCTGGTGGTGCTCCTGCCA
ATGTGGCTGTTGGCATATCGAGGTTAGGAGGGTCATCAGCTTTCGTCGGT
AAGCTAGGAGACGATGAATTTGGTTACATGTTGGCTAACATTTTAAAAGA
GAACAATGTCGATACATCCGGTGTTCGTTATGATTCCACTGCAAGGACTG
CCTTGGCGTTTGTTACACTCAGAGCTGATGGTGAGCGTGAATTTTTGTTT
TTTCGTCATCCAAGTGCTGACATGCTTCTATGTGAATCGGAACTTGACAA
AAACCTCATTAAGCAGGGCAGCATCTTCCACTATGGTTCAATTAGTTTAA
TTGCAGAACCATGCAGGTCAACTCAACTTGCTGCCATGAACTTGGCCAAA
GAGTCTGGTAGCATCCTCTCCTATGATCCTAATTTGAGATTGCCACTATG
GCCATCAGAAGAGGCTGCTCGCGAGGGCATAATGAGTATATGGGATCAAG
CAGATATAATAAAGGTAAAGCGATGATGAAATTACATTCTTAACTGGTGG
TGATGATCATAATGATGATAACGTGGTGTTAGAGAAGCTGTTTCATCCTA
ATCTCAAGCTTTTGATTGTCACTGA
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