CN185104

Overview
NameCN185104
Unique NameCN185104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2771 contig Csv1_Contig2771:41..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: IOLC_CLOBA (5-dehydro-2-deoxygluconokinase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=iolC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 49/194 (25.26%), Postives = 84/194 (43.30%), Query Frame = 3
Query:   45 VVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTART-ALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKR 623
            +V  G + IDF PT     L                    +SRLG    F+GK+  D+FG  + +      +DTS ++Y     +  L F  + +  E   L +R+  AD+ L  +E+D+  IK          +L   P R   L A+ LAK++ +++ +D + R   W +++        +  Q+DI+   R
Sbjct:   14 IVPIGRVAIDFNPTDINRPLSKSMTFKKYLGGSPANIAVGLSRLGKKVGFIGKVSKDQFGKFVVDYFNNEGIDTSQIKYAENGESLGLTFTEIASPTESSILMYRNGIADLELDVNEIDEEYIKNTKAIVISGTALAKSPSREAALKALELAKKNDTVVIFDVDYREYNWKNKDEIAIYYSIVGKQSDIVMGSR 207          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: IOLC_CLOPE (5-dehydro-2-deoxygluconokinase OS=Clostridium perfringens GN=iolC PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13
Identity = 49/194 (25.26%), Postives = 84/194 (43.30%), Query Frame = 3
Query:   45 VVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTART-ALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKR 623
            +V  G + IDF PT     L                    ++RLG    F+GK+ DD FG  + N  K+  +D S +       +  L F  + +  E   L +R+  AD+ L   ++D++ IK          +L   P R   L A+ LAK++G+++ +D + R   W +++        +  ++DII   R
Sbjct:   14 IVPVGRVAIDFNPTDIHKPLSESRNFNKYLGGSPANIAVGLARLGKKVGFIGKVSDDRFGEFVVNYFKKEGIDVSEISKAKNGESLGLTFTEILSPTESSILMYRNGIADLQLDVDDIDEDYIKNTKAIVISGTALAMSPSREAALKALRLAKKNGTVVIFDVDYREYNWKNKDEIAIYYSIVGKESDIIMGSR 207          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: IOLC_CLOP1 (5-dehydro-2-deoxygluconokinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=iolC PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13
Identity = 49/194 (25.26%), Postives = 84/194 (43.30%), Query Frame = 3
Query:   45 VVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTART-ALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKR 623
            +V  G + IDF PT     L                    ++RLG    F+GK+ DD FG  + N  K+  +D S +       +  L F  + +  E   L +R+  AD+ L   ++D++ IK          +L   P R   L A+ LAK++G+++ +D + R   W +++        +  ++DII   R
Sbjct:   14 IVPVGRVAIDFNPTDIHKPLSESRNFNKYLGGSPANIAVGLARLGKKVGFIGKVSDDRFGEFVVNYFKKEGIDVSEISKAKNGESLGLTFTEILSPTESSILMYRNGIADLQLDVDDIDEDYIKNTKAIVISGTALAMSPSREAALKALRLAKKNGTVVIFDVDYREYNWKNKDEIAIYYSIVGKESDIIMGSR 207          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: IOLC_LISIN (5-dehydro-2-deoxygluconokinase OS=Listeria innocua GN=iolC PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 40/149 (26.85%), Postives = 78/149 (52.35%), Query Frame = 3
Query:  168 SRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTAR-TALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADII 611
            ++LG    F+GK+ DD+ G  +   +++ N++T G+  D+  R   LAF  +++  E   L +R   AD+ L   E+ ++ IK+  +      +L   P R   L A++LA+++  I++++ + R   W + E        + +QAD+I
Sbjct:   54 AKLGLKVGFIGKISDDQHGRFIEKYMRDLNINTDGMVKDTAGRKVGLAFTEIKSPEECSILMYRENVADLYLTPEEISEDYIKETRVLLVSGTALAQSPSREAVLKAVHLAQKNDVIVAFELDYRPYTWKNTEETAVYYSLVAEQADVI 202          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: IOLC_CLOBB (5-dehydro-2-deoxygluconokinase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=iolC PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13
Identity = 49/194 (25.26%), Postives = 83/194 (42.78%), Query Frame = 3
Query:   45 VVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTART-ALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKR 623
            +V  G + IDF P      L                    +SRLG    F+GK+  D+FG  + +      +DTS ++Y     +  L F  + +  E   L +R+  AD+ L  +E+D+  IK          +L   P R   L A+ LAK++ +I+ +D + R   W +++        +  Q+DI+   R
Sbjct:   14 IVPIGRVAIDFNPIDINRPLSESKTFKKYLGGSPANIAVGLSRLGKKVGFIGKVSKDQFGKFVVDYFDNEGIDTSQIKYAENGESLGLTFTEIASPTESSILMYRNGIADLELDVNEIDEEYIKNTKAIVISGTALAKSPSREAALKALELAKKNDTIVIFDVDYREYNWKNKDEIAIYYSIVGKQSDIVMGSR 207          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: IOLC_GEOKA (5-dehydro-2-deoxygluconokinase OS=Geobacillus kaustophilus GN=iolC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 38/134 (28.36%), Postives = 71/134 (52.99%), Query Frame = 3
Query:  165 ISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTAR-TALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEE 563
            ++RLG  + F+G++ DD+ G  +   LK N +DTS V  D +   T LAF  +++  +   L +R   AD+ L  +++D++ I++         +L   P R     A++ A+  G+++ +D + R   W S+E
Sbjct:   54 MARLGMKTGFIGRVADDQMGRFIVRYLKNNGIDTSHVITDKSGSVTGLAFTEIKSPTDCSILMYRDNVADLKLEPNDIDEDYIRRAKCLLISGTALAKSPSREAVFLALDYARRHGTVVVFDLDYRPYTWQSKE 187          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: IOLC_CLOB8 (5-dehydro-2-deoxygluconokinase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=iolC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 49/194 (25.26%), Postives = 77/194 (39.69%), Query Frame = 3
Query:   45 VVCFGEMLIDFVPTVGGVSLXXXXXXXXXXXXXXXXXXXXISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTART-ALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKR 623
            +V  G + IDF P      L                    ++RLG    F+GK+  D+FG  + N      +DTS ++Y        L F  + +  E   L +R   AD+ L   E+D+  IK          +L   P R   L A+ LAK + +++ +D + R   W + +           Q+DII   R
Sbjct:   14 IVPIGRVAIDFNPIDINKPLSESSTFKKYLGGSPANIAVGLARLGKKIGFIGKVSKDQFGEFVVNYFDNEGIDTSQIKYSKNGENLGLTFTEIASPTESSILMYRQGIADLELNVDEIDEEYIKNTKAIVISGTALAKSPSREAALKALELAKRNNTVVIFDVDYRAYNWKNSDEIAIYYSIAGKQSDIIMGSR 207          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: IOLC1_BACCZ (5-dehydro-2-deoxygluconokinase 1 OS=Bacillus cereus (strain ZK / E33L) GN=iolC1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 40/132 (30.30%), Postives = 68/132 (51.52%), Query Frame = 3
Query:  168 SRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDST-ARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSE 560
            +RLG  + F+GK+ DD+ G  +   LK+N ++T  +R D T A T LAF  +++  +   L +R   AD+ L  +E+ ++ IKQ         +L   P R     A+  A++   ++ +D + R   W SE
Sbjct:   55 ARLGLQTGFIGKVSDDQMGRFITGYLKDNKINTDQIRIDCTGAVTGLAFTEIKSPEDCSILMYRDNVADLNLDPTEVSEDYIKQSKALLISGTALAKSPSREAVFLALEYARKHDVVVFFDVDYRPYTWQSE 186          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: IOLC_LISMO (5-dehydro-2-deoxygluconokinase OS=Listeria monocytogenes GN=iolC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12
Identity = 38/149 (25.50%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  168 SRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTAR-TALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADII 611
            ++LG    F+GK+ DD+ G  +   +++  ++T G+  D+  R   LAF  +++  E   L +R   AD+ L   E+ ++ IK+  +      +L   P R   L A++LA+++  +++++ + R   W + E        + +QAD+I
Sbjct:   54 AKLGLKVGFIGKISDDQHGRFIEKYMRDLAINTDGMVKDTEGRKVGLAFTEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKAVSLARKNDVVVAFELDYRPYTWKNSEETAVYYSLVAEQADVI 202          
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: IOLC_BACC3 (5-dehydro-2-deoxygluconokinase OS=Bacillus cereus (strain 03BB102) GN=iolC PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 40/132 (30.30%), Postives = 66/132 (50.00%), Query Frame = 3
Query:  168 SRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDST-ARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSE 560
            SRLG  + F+GK+ DD+ G  +   LK+N ++T  +  D T A T LAF  +++  +   L +R   AD+ L  +E+ ++ IKQ         +L   P R     A+  A +   ++ +D + R   W SE
Sbjct:   55 SRLGLQTGFIGKVSDDQMGRFITGYLKDNKINTDQIHIDCTGAVTGLAFTEIKSPEDCSILMYRDNVADLNLDPTEVSEDYIKQSKALLISGTALAKSPSREAVFLALEYAHKHDVVVFFDVDYRPYTWQSE 186          
The following BLAST results are available for this feature:
BLAST of CN185104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
IOLC_CLOBA1.916e-1325.265-dehydro-2-deoxygluconokinase OS=Clostridium botu... [more]
IOLC_CLOPE5.576e-1325.265-dehydro-2-deoxygluconokinase OS=Clostridium perf... [more]
IOLC_CLOP15.576e-1325.265-dehydro-2-deoxygluconokinase OS=Clostridium perf... [more]
IOLC_LISIN7.282e-1326.855-dehydro-2-deoxygluconokinase OS=Listeria innocua... [more]
IOLC_CLOBB9.511e-1325.265-dehydro-2-deoxygluconokinase OS=Clostridium botu... [more]
IOLC_GEOKA1.242e-1228.365-dehydro-2-deoxygluconokinase OS=Geobacillus kaus... [more]
IOLC_CLOB81.242e-1225.265-dehydro-2-deoxygluconokinase OS=Clostridium beij... [more]
IOLC1_BACCZ1.242e-1230.305-dehydro-2-deoxygluconokinase 1 OS=Bacillus cereu... [more]
IOLC_LISMO2.767e-1225.505-dehydro-2-deoxygluconokinase OS=Listeria monocyt... [more]
IOLC_BACC34.720e-1230.305-dehydro-2-deoxygluconokinase OS=Bacillus cereus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006M02_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185104 ID=CN185104; Name=CN185104; organism=Citrus sinensis; type=EST; length=725bp
TTTCTGCTAGTATGGATGGAGGGTCTGGAGCTTATGATCGGCTAGTTGTT
TGCTTTGGGGAAATGTTGATCGATTTTGTTCCAACTGTTGGAGGGGTTTC
ACTTGCTGAAGCACCTGCTTTCAAGAAGGCTCCTGGTGGTGCTCCTGCCA
ATGTGGCTGTTGGCATATCGAGGTTAGGAGGGTCATCAGCTTTCGTCGGT
AAGCTAGGAGACGATGAATTTGGTTACATGTTGGCTAACATTTTAAAAGA
GAACAATGTCGATACATCCGGTGTTCGTTATGATTCCACTGCAAGGACTG
CCTTGGCGTTTGTTACACTCAGAGCTGATGGTGAGCGTGAATTTTTGTTT
TTTCGTCATCCAAGTGCTGACATGCTTCTATGTGAATCGGAACTTGACAA
AAACCTCATTAAGCAGGGCAGCATCTTCCACTATGGTTCAATTAGTTTAA
TTGCAGAACCATGCAGGTCAACTCAACTTGCTGCCATGAACTTGGCCAAA
GAGTCTGGTAGCATCCTCTCCTATGATCCTAATTTGAGATTGCCACTATG
GCCATCAGAAGAGGCTGCTCGCGAGGGCATAATGAGTATATGGGATCAAG
CAGATATAATAAAGGTAAAGCGATGATGAAATTACATTCTTAACTGGTGG
TGATGATCATAATGATGATAACGTGGTGTTAGAGAAGCTGTTTCATCCTA
ATCTCAAGCTTTTGATTGTCACTGA
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