CN185104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: IOLC_LISMC (5-dehydro-2-deoxygluconokinase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=iolC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11 Identity = 37/149 (24.83%), Postives = 76/149 (51.01%), Query Frame = 3 Query: 168 SRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTAR-TALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADII 611 ++LG F+GK+ D+ G + +++ +++T G+ D+ R LAF +++ E L +R AD+ L E+ ++ IK+ + +L P R L A++LA+++ ++++ + R W + E + +QAD+I Sbjct: 54 AKLGLKVGFIGKISADQHGRFIEKYMRDLSINTDGMVKDTEGRKVGLAFTEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKAVSLARKNDVAVAFELDYRPYTWTNTEETAVYYSLVAEQADVI 202
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: IOLC_BACLD (5-dehydro-2-deoxygluconokinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=iolC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11 Identity = 42/149 (28.19%), Postives = 72/149 (48.32%), Query Frame = 3 Query: 168 SRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTA-LAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADII 611 S+LG + F+GK+ DD+ G + ++ VDTS + D A LAF + + E L +R AD+ L SE++++ I + + +L P R L A+ LAK+ + ++ + R W S E + +Q+DI+ Sbjct: 54 SKLGLKTGFIGKIPDDQHGRFIETYMRNTGVDTSQMAVDKDGHKAGLAFTEILSPEECSILMYRDDVADLYLAPSEVNEDYIAKSKMLLVSGTALAKSPSREAVLKAVQLAKKHQVKVVFELDYRPYTWTSAEETAVYYTLVAEQSDIV 202
BLAST of CN185104 vs. ExPASy Swiss-Prot
Match: IOLC_BACHD (5-dehydro-2-deoxygluconokinase OS=Bacillus halodurans GN=iolC PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11 Identity = 40/149 (26.85%), Postives = 74/149 (49.66%), Query Frame = 3 Query: 168 SRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTA-RTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADII 611 S+LG + F+GK+ DD+ G + + ++ VDTS + D +T LAF +++ E L +R AD+ L E+++ I++ + +L P R L A+ LAK + + ++ + R W + E + +Q+DI+ Sbjct: 54 SKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIV 202 The following BLAST results are available for this feature:
BLAST of CN185104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185104 ID=CN185104; Name=CN185104; organism=Citrus sinensis; type=EST; length=725bpback to top |