CN185093
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185093 vs. ExPASy Swiss-Prot
Match: ARF1_CHLRE (ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.282e-23 Identity = 58/166 (34.94%), Postives = 89/166 (53.61%), Query Frame = 3 Query: 135 LRSLFFKQEMELSLIGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSVPIARSELHELLMKPSLSGIPLLVLGNKIDKSEALSKQALVDQLGLESITDREVCCYMISCKDSINIDAVIDWL 632 L LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ DR+ V AR ELH +L + L LLV NK D A++ + D+LGL S+ R + +DWL Sbjct: 9 LSRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 173
BLAST of CN185093 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.675e-23 Identity = 55/141 (39.01%), Postives = 83/141 (58.87%), Query Frame = 3 Query: 144 LFFKQEMELSLIGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSVPIARSELHELLMKPSLSGIPLLVLGNKIDKSEALSKQALVDQLGLESITDR 566 LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ DRD V AR ELH +L + L LLV NK D A++ + D+LGL S+ R Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQR 151
BLAST of CN185093 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.675e-23 Identity = 57/163 (34.97%), Postives = 88/163 (53.99%), Query Frame = 3 Query: 144 LFFKQEMELSLIGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSVPIARSELHELLMKPSLSGIPLLVLGNKIDKSEALSKQALVDQLGLESITDREVCCYMISCKDSINIDAVIDWL 632 LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ DR+ V AR ELH +L + L LLV NK D A++ + D+LGL S+ R + +DWL Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 173
BLAST of CN185093 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.675e-23 Identity = 57/163 (34.97%), Postives = 88/163 (53.99%), Query Frame = 3 Query: 144 LFFKQEMELSLIGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSVPIARSELHELLMKPSLSGIPLLVLGNKIDKSEALSKQALVDQLGLESITDREVCCYMISCKDSINIDAVIDWL 632 LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ DR+ V AR ELH +L + L LLV NK D A++ + D+LGL S+ R + +DWL Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 173
BLAST of CN185093 vs. ExPASy Swiss-Prot
Match: ARF1_LOCMI (ADP-ribosylation factor 1 OS=Locusta migratoria GN=ARF1 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.675e-23 Identity = 57/175 (32.57%), Postives = 92/175 (52.57%), Query Frame = 3 Query: 129 NWLRSLFFKQEMELSLIGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSVPIARSELHELLMKPSLSGIPLLVLGNKIDKSEALSKQALVDQLGLESITDREVCCYMISCKDSINIDAVIDWLIKHSKTA 653 N + LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ DR+ + AR EL +L + L LL+ NK D A++ + D+LGL S+ +R + +DWL K A Sbjct: 7 NLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNA 180
BLAST of CN185093 vs. ExPASy Swiss-Prot
Match: ARF1_DROME (ADP-ribosylation factor 1 OS=Drosophila melanogaster GN=Arf79F PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.675e-23 Identity = 57/175 (32.57%), Postives = 92/175 (52.57%), Query Frame = 3 Query: 129 NWLRSLFFKQEMELSLIGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSVPIARSELHELLMKPSLSGIPLLVLGNKIDKSEALSKQALVDQLGLESITDREVCCYMISCKDSINIDAVIDWLIKHSKTA 653 N + LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ DR+ + AR EL +L + L LL+ NK D A++ + D+LGL S+ +R + +DWL K A Sbjct: 7 NLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNA 180
BLAST of CN185093 vs. ExPASy Swiss-Prot
Match: ARL3_XENLA (ADP-ribosylation factor-like protein 3 OS=Xenopus laevis GN=arl3 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23 Identity = 65/184 (35.33%), Postives = 96/184 (52.17%), Query Frame = 3 Query: 105 MGFLDSILNWLRSLFFKQEMELSLIGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSVPIARSELHELLMKPSLSGIPLLVLGNKIDKSEALSKQALVDQLGLESITDREVCCYMISCKDSINIDAVIDWLIKHSKTAK 656 MG L SIL L+S QE+ + L+GL NAGKT+L+ +A+ S + PT GFN++ V + +WD+GGQR+ R W Y ++YV+D+ADR EL ELL + LSG+P+L+ NK D A + + L L +I DR S + ++W+ K+ K Sbjct: 1 MGLL-SILRKLKSAP-DQEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGQGVQDGMNWVCKNVNAKK 181
BLAST of CN185093 vs. ExPASy Swiss-Prot
Match: ARFJ_DICDI (ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23 Identity = 60/174 (34.48%), Postives = 99/174 (56.90%), Query Frame = 3 Query: 114 LDSILNWLRSLFF-KQEMELSLIGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSVPIARSELHELLMKPSLSGIPLLVLGNKIDKSEALSKQALVDQLGLESITDREVCCYMISCKDSINIDAVIDWL 632 L S + + SLF K+E + +IGL AGK++L+ + G IPT+GFN+ + N+++ +WD+GGQ + R +W+ Y G +A+++VVD+ DR+ + + E+ LL++ L G +LV NK D + A++ +V+ L L SI DR+ S S I DW+ Sbjct: 9 LASFFSNIFSLFEGKKETRILMIGLDGAGKSTLLYKLKLGDVVST-IPTIGFNVETIEYKNLSMTVWDVGGQHKIRPLWKHYYHGSNAVIFVVDSTDRERMDEVKEEIDNLLIQDELKGTQILVFANKQDMNNAMNTAEIVNSLDLNSIKDRKWYVQPCSAIRSDGIYEGFDWV 181
BLAST of CN185093 vs. ExPASy Swiss-Prot
Match: ARF2_RAT (ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23 Identity = 59/173 (34.10%), Postives = 91/173 (52.60%), Query Frame = 3 Query: 138 RSLFFKQEMELSLIGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSVPIARSELHELLMKPSLSGIPLLVLGNKIDKSEALSKQALVDQLGLESITDREVCCYMISCKDSINIDAVIDWLIKHSKTAK 656 +SLF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ DR+ V AR EL +L + L LLV NK D A++ + D+LGL S+ R + +DWL K K Sbjct: 10 KSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQK 181
BLAST of CN185093 vs. ExPASy Swiss-Prot
Match: ARF2_MOUSE (ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23 Identity = 59/173 (34.10%), Postives = 91/173 (52.60%), Query Frame = 3 Query: 138 RSLFFKQEMELSLIGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSVPIARSELHELLMKPSLSGIPLLVLGNKIDKSEALSKQALVDQLGLESITDREVCCYMISCKDSINIDAVIDWLIKHSKTAK 656 +SLF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ DR+ V AR EL +L + L LLV NK D A++ + D+LGL S+ R + +DWL K K Sbjct: 10 KSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQK 181 The following BLAST results are available for this feature:
BLAST of CN185093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185093 ID=CN185093; Name=CN185093; organism=Citrus sinensis; type=EST; length=753bpback to top |