CN185083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_ARATH (Indole-3-glycerol phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=At2g04400 PE=2 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 1.570e-57 Identity = 121/173 (69.94%), Postives = 134/173 (77.46%), Query Frame = -2 Query: 273 EALKTWRL*GVQE*SAPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGKDIS 791 E L+ R GV+ PLLCKEF+VD WQIYYARTKGADAVLLIAAVL DL+I ++ KICK L L ALVEVHDEREM RV ETFEVDISNTKKLLEGE G IR++++IVVGESGLFTPDDIAYVQ AGVKAVLVGESIVKQ+DP KGI GLFG++IS Sbjct: 231 ENLEAIRSAGVK---CPLLCKEFVVDPWQIYYARTKGADAVLLIAAVLADLEITFLLKICKKLSLAALVEVHDEREMGRVLGIEGIELVGINNRSLETFEVDISNTKKLLEGEHGRQIRERDMIVVGESGLFTPDDIAYVQAAGVKAVLVGESIVKQNDPEKGIAGLFGRNIS 400
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_MICAN (Indole-3-glycerol phosphate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=trpC PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 8.442e-42 Identity = 87/154 (56.49%), Postives = 105/154 (68.18%), Query Frame = -2 Query: 288 SAPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 749 S PLLCKEFI+ +QIYYAR+KGADAVLLIAA+L D D+ Y KI K LG+TALVEVH E DRV ETF VD+ NT++LLE RGE +R+K I++V ESGL T D+A V++AG AVL+GES+VK DP GI LF Sbjct: 140 SLPLLCKEFILYPYQIYYARSKGADAVLLIAAILSDQDLAYFVKIVKGLGMTALVEVHSLAEFDRVLAIEGIELIGINNRNLETFTVDLDNTRQLLEA-RGEQVREKGILIVSESGLHTATDLAKVKQAGANAVLIGESLVKLPDPALGIQKLF 292 HSP 2 Score: 33.8834 bits (76), Expect = 8.442e-42 Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = -1 Query: 757 SILTDEKYFKGSFENLEAVRSA 822 S+LTD K+F+GS+ENL VR A Sbjct: 117 SVLTDSKFFQGSYENLTLVRQA 138
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_CYAP8 (Indole-3-glycerol phosphate synthase OS=Cyanothece sp. (strain PCC 8801) GN=trpC PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.850e-39 Identity = 81/153 (52.94%), Postives = 101/153 (66.01%), Query Frame = -2 Query: 285 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 743 PLLCKEFI+ +QIY ARTKGADAVLLIAA+L D D+ Y KI + LG+TAL+EVH E+DRV ETFEVD+ T +LL R + I+ I ++ ESGL TPDD+ +VQ+AG VL+GES+VKQ DP + I LFG Sbjct: 142 PLLCKEFILYPYQIYLARTKGADAVLLIAAILSDRDLSYFLKIIQTLGMTALIEVHSLTELDRVLAIEGVSLIGINNRNLETFEVDLKTTSQLLAARRDK-IQALGIKIISESGLHTPDDLQFVQQAGSDGVLIGESLVKQPDPTQAIANLFG 293 HSP 2 Score: 33.4982 bits (75), Expect = 2.850e-39 Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = -1 Query: 757 SILTDEKYFKGSFENLEAVRSA 822 S+LTD K+F+GSFENL VR + Sbjct: 117 SVLTDAKFFQGSFENLALVRQS 138
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_SYNY3 (Indole-3-glycerol phosphate synthase OS=Synechocystis sp. (strain PCC 6803) GN=trpC PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 6.815e-38 Identity = 76/154 (49.35%), Postives = 101/154 (65.58%), Query Frame = -2 Query: 282 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGK 743 PLLCKEFI+ +QIY AR++GADAVLLIAA+L D D+RY KI + LG+ ALVEVH EMDRV +TF VD+ T+ L +R E + Q +I +V ESG++ D+ +Q+AG +AVLVGES+VKQ DP + I L+G+ Sbjct: 142 PLLCKEFIIYPYQIYLARSRGADAVLLIAAILSDKDLRYFLKIIEGLGMAALVEVHTLEEMDRVLALDGVQLIGVNNRNLQTFTVDLQTTEDLF-AQRREQLTQGDITLVSESGIYELADLQRLQQAGARAVLVGESLVKQPDPQQAIAALYGE 294 HSP 2 Score: 39.6614 bits (91), Expect = 6.815e-38 Identity = 17/22 (77.27%), Postives = 21/22 (95.45%), Query Frame = -1 Query: 757 SILTDEKYFKGSFENLEAVRSA 822 S+LTDEK+F+GSFENL+ VRSA Sbjct: 117 SVLTDEKFFQGSFENLQLVRSA 138
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_CYAA5 (Indole-3-glycerol phosphate synthase OS=Cyanothece sp. (strain ATCC 51142) GN=trpC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 5.654e-37 Identity = 76/152 (50.00%), Postives = 97/152 (63.82%), Query Frame = -2 Query: 288 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 743 PLLCKEFI+ +QIY AR KGADA+LLIAA+L D D++Y+ KI LG+T LVEVH E+DRV ETFEV + T L+ + E I+++ I +V ESG+ TP + V EAG AVL+GES+VKQDDP + I LF Sbjct: 142 PLLCKEFIIYPYQIYLARVKGADAILLIAAILKDSDLQYLIKIIHGLGMTPLVEVHSLAELDRVLAIEGVSLVGINNRNLETFEVSLETTTNLITARQDE-IKERGIYIVSESGIHTPQHLQQVTEAGANAVLIGESLVKQDDPTQAIANLF 292 HSP 2 Score: 33.8834 bits (76), Expect = 5.654e-37 Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = -1 Query: 757 SILTDEKYFKGSFENLEAVRSA 822 S+LTD K+F+GSF+NL VR A Sbjct: 117 SVLTDSKFFQGSFDNLALVRQA 138
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_TRIEI (Indole-3-glycerol phosphate synthase OS=Trichodesmium erythraeum (strain IMS101) GN=trpC PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.219e-34 Identity = 73/157 (46.50%), Postives = 102/157 (64.97%), Query Frame = -2 Query: 273 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGKDIS 743 PLLCK+F++ +QIY+AR GADAVLLIAA+L D D++Y KI LG+TALVEVH +E+DRV E F VD+ T +L+E + E + + I+VV ESG+ + +DI ++ AGV AVLVGES+VK+ +PG + LF ++ S Sbjct: 142 PLLCKDFLIYPYQIYFARLYGADAVLLIAAILSDQDLKYFIKIVNSLGMTALVEVHTLKELDRVLGIEGVKLIGINNRNLEDFSVDLQTTFQLMEARKKE-LEKLGILVVSESGIHSYEDINFMINAGVNAVLVGESLVKKTNPGTALLQLFNENKS 297 HSP 2 Score: 32.7278 bits (73), Expect = 3.219e-34 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = -1 Query: 763 SILTDEKYFKGSFENLEAVR 822 S+LTD K+F+GSFENL +R Sbjct: 117 SVLTDRKFFQGSFENLANIR 136
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_SYNP6 (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=trpC PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.666e-33 Identity = 71/153 (46.41%), Postives = 94/153 (61.44%), Query Frame = -2 Query: 285 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 743 PLLCK+F++ +QIY AR GADAVLLIAA+L D D+RY KI LGL ALVEVH E++RV +TF D++ T+ L R +++++V ESGLFT D+ V +AG +AVL+GES+VKQ DPG + L G Sbjct: 143 PLLCKDFVIYPYQIYKARLLGADAVLLIAAILSDADLRYFLKIAHSLGLNALVEVHSLPELERVLALDDLRLVGINNRNLKTFVTDLAVTEHL-----AAQCRDRDLLLVSESGLFTGADLDRVTQAGAQAVLIGESLVKQPDPGLALQQLVG 290 HSP 2 Score: 36.965 bits (84), Expect = 2.666e-33 Identity = 15/22 (68.18%), Postives = 20/22 (90.91%), Query Frame = -1 Query: 757 SILTDEKYFKGSFENLEAVRSA 822 S+LTDEK+F+G FENL+ VR+A Sbjct: 118 SVLTDEKFFQGGFENLQRVRAA 139
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_SYNE7 (Indole-3-glycerol phosphate synthase OS=Synechococcus elongatus (strain PCC 7942) GN=trpC PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 2.666e-33 Identity = 71/153 (46.41%), Postives = 94/153 (61.44%), Query Frame = -2 Query: 285 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 743 PLLCK+F++ +QIY AR GADAVLLIAA+L D D+RY KI LGL ALVEVH E++RV +TF D++ T+ L R +++++V ESGLFT D+ V +AG +AVL+GES+VKQ DPG + L G Sbjct: 143 PLLCKDFVIYPYQIYKARLLGADAVLLIAAILSDADLRYFLKIAHSLGLNALVEVHSLPELERVLALDDLRLVGINNRNLKTFVTDLAVTEHL-----AAQCRDRDLLLVSESGLFTGADLDRVTQAGAQAVLIGESLVKQPDPGLALQQLVG 290 HSP 2 Score: 36.965 bits (84), Expect = 2.666e-33 Identity = 15/22 (68.18%), Postives = 20/22 (90.91%), Query Frame = -1 Query: 757 SILTDEKYFKGSFENLEAVRSA 822 S+LTDEK+F+G FENL+ VR+A Sbjct: 118 SVLTDEKFFQGGFENLQRVRAA 139
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_GLOVI (Indole-3-glycerol phosphate synthase OS=Gloeobacter violaceus GN=trpC PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.522e-33 Identity = 70/148 (47.30%), Postives = 95/148 (64.19%), Query Frame = -2 Query: 300 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGI 743 PLLCKEFI+ +QIY AR GADAVLLIAA+L D D+ Y+ ++ LG+ ALVEVHD E+DRV FEV + T+ LL ERGE + + I VV ESG++ D+A V++AG +AVLVGES++++ DP + + Sbjct: 142 PLLCKEFILGPYQIYLARAHGADAVLLIAAILSDTDLAYLMRVADQLGMAALVEVHDLEELDRVLALEGVALVGINNRNLLDFEVHLETTETLLT-ERGERLAEWGITVVSESGIYQGADLARVRKAGARAVLVGESLLREADPAQAV 288 HSP 2 Score: 30.8018 bits (68), Expect = 4.522e-33 Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = -1 Query: 763 SILTDEKYFKGSFENLEAVR 822 S+LTDE +F+GSF NL +R Sbjct: 117 SVLTDEAFFQGSFTNLSRIR 136
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_ACAM1 (Indole-3-glycerol phosphate synthase OS=Acaryochloris marina (strain MBIC 11017) GN=trpC PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.872e-32 Identity = 72/143 (50.35%), Postives = 97/143 (67.83%), Query Frame = -2 Query: 321 SAPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 749 S PLLCKEF++ +QIY AR++GADAVLLIAA+L D D+ Y KI K LG+TALVEVH E++RV ETF VD+ T +LL ++G ++ ++I+VV ESGL T D+A V++AG AVL+GES+VK+ Sbjct: 140 SLPLLCKEFVIYPYQIYLARSRGADAVLLIAAILSDQDLTYFLKIIKSLGMTALVEVHTLPELERVMDIPGIELIGINNRDLETFTVDLEVTCQLL-AQQGTSLQDQDILVVSESGLHTSADLAQVKQAGAGAVLIGESLVKE 281 HSP 2 Score: 30.0314 bits (66), Expect = 2.872e-32 Identity = 11/22 (50.00%), Postives = 19/22 (86.36%), Query Frame = -1 Query: 757 SILTDEKYFKGSFENLEAVRSA 822 S+LTD ++F+GSF+ L+ +R+A Sbjct: 117 SVLTDAEFFQGSFDYLQQIRAA 138 The following BLAST results are available for this feature:
BLAST of CN185083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185083 ID=CN185083; Name=CN185083; organism=Citrus sinensis; type=EST; length=822bpback to top |