CN185083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_CYAP4 (Indole-3-glycerol phosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=trpC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.401e-31 Identity = 70/141 (49.65%), Postives = 92/141 (65.25%), Query Frame = -2 Query: 321 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 743 PLLCKEFI+ +Q+Y AR++GADAVLLIAA+L D D++Y KI LG+ AL+EVH E+DRV E F VD+ T LL +R + + Q+NI+VV ESGL+ D+ VQ AG KAVL+GES+VK+ Sbjct: 141 PLLCKEFIIYPYQMYLARSQGADAVLLIAAILSDQDLQYFLKIATSLGMAALIEVHTLTELDRVLNLEGVSLVGINNRNLENFTVDLQTTCDLL-SKRWDQLDQRNILVVSESGLYQAVDLQQVQTAGAKAVLIGESLVKK 280 HSP 2 Score: 31.5722 bits (70), Expect = 1.401e-31 Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = -1 Query: 757 SILTDEKYFKGSFENLEAVRSA 822 S+LTDEK+F+GSF L +R A Sbjct: 116 SVLTDEKFFQGSFTYLNQIRQA 137
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_SYNSC (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain CC9605) GN=trpC PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.825e-31 Identity = 69/151 (45.70%), Postives = 97/151 (64.24%), Query Frame = -2 Query: 291 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGL 743 PLLCKEF++ +Q++ AR GADAVLLIAA+L D D+RY+ K LGLT LVEVHD EMDRV +FE D++ T++LL + + ++Q+ +++V ESGLF+ D+ VQ AG AVLVGE++++Q D G+ L Sbjct: 142 PLLCKEFVLSPYQLFQARAAGADAVLLIAAILSDQDLRYLNKAAAALGLTVLVEVHDATEMDRVLSIGGFPLIGINNRDLTSFETDLATTERLLV-DFNDRLKQQGVLLVSESGLFSRADLDRVQAAGAGAVLVGEALMRQQDVEAGLVQL 291 HSP 2 Score: 26.5646 bits (57), Expect = 1.825e-31 Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = -1 Query: 757 SILTDEKYFKGSFENLEAVRSA 822 S+LTD+ +F+G F+ L VR A Sbjct: 117 SVLTDKTFFQGGFDVLVEVRQA 138
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_PROM4 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=trpC PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 8.900e-31 Identity = 70/153 (45.75%), Postives = 94/153 (61.44%), Query Frame = -2 Query: 285 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 743 PLLCKEFI+ +QIY AR GADAVLLIAA+L D D+ Y+ K+ LGLT LVEVHD E+ RV +TF D+ TK++++ E + I ++ +++V ESGLF D+ V G KAVLVGES+++Q D G + L G Sbjct: 142 PLLCKEFIIQPYQIYQARVAGADAVLLIAAILSDQDLLYLRKVAISLGLTILVEVHDSNELKRVLDLEGFPLVGINNRDLKTFNTDLRTTKEVVK-EHKKRISEQEVLLVSESGLFNSADLEEVSSYGAKAVLVGESLMRQPDIGLALKNLQG 293 HSP 2 Score: 26.5646 bits (57), Expect = 8.900e-31 Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = -1 Query: 763 SILTDEKYFKGSFENLEAVR 822 S+LTD+ +F+G FE L VR Sbjct: 117 SVLTDKSFFQGGFEVLVQVR 136
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_PROMT (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain NATL2A) GN=trpC PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.509e-30 Identity = 67/153 (43.79%), Postives = 97/153 (63.40%), Query Frame = -2 Query: 285 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 743 P+LCK+FI+ +Q+Y AR GADA LLIAA+L D D++Y++K+ + LGLT LVEVHD E++RV ++F+ D+ TKKL E + I++ +I +V ESGLF +D+ V+ G AVLVGES++ Q+D G+ L G Sbjct: 142 PILCKDFILYPYQLYQARAAGADAALLIAAILTDSDLKYLSKVAEHLGLTILVEVHDSEELERVLNINVFNLIGINNRNLKSFKTDLEVTKKLAENYANQ-IKENSITLVSESGLFNREDLDLVKSYGADAVLVGESLMSQEDILGGVKKLIG 293 HSP 2 Score: 27.335 bits (59), Expect = 1.509e-30 Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = -1 Query: 763 SILTDEKYFKGSFENLEAVR 822 S+LTD+K+F+G F+ L VR Sbjct: 117 SVLTDKKFFQGGFDVLVEVR 136
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_SYNR3 (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain RCC307) GN=trpC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.559e-30 Identity = 66/143 (46.15%), Postives = 90/143 (62.94%), Query Frame = -2 Query: 315 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 743 PLLCKEFI+ +Q+Y AR GADAVLLIAA+L D DI Y+ K+ + LGL L+EVHD E++R +F+ D++ T + L GE +RQ ++V ESGLF+ DD+ VQ AG AVLVGE++++Q D Sbjct: 142 PLLCKEFILSPYQLYQARAAGADAVLLIAAILTDQDISYLLKVARSLGLQVLLEVHDAAELERALGFEGVQLIGINNRDLTSFDTDLATT-ETLTATYGEQLRQSGALLVSESGLFSRDDLDRVQSAGADAVLVGEALMRQSD 283 HSP 2 Score: 27.335 bits (59), Expect = 2.559e-30 Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = -1 Query: 763 SILTDEKYFKGSFENLEAVR 822 S+LTD+++F+G FE L VR Sbjct: 117 SVLTDKRFFQGGFEVLVQVR 136
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_PROM1 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain NATL1A) GN=trpC PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.649e-30 Identity = 66/153 (43.14%), Postives = 97/153 (63.40%), Query Frame = -2 Query: 285 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 743 P+LCK+FI+ +Q+Y AR GADA LLIAA+L D D++Y++K+ + LGLT LVEVHD E++RV ++F+ D+ TKKL + + I++ +I +V ESGLF +D+ V+ G AVLVGES++ Q+D G+ L G Sbjct: 142 PILCKDFILYPYQLYQARAAGADAALLIAAILTDSDLKYLSKVAEHLGLTILVEVHDSEELERVLNINVFNLIGINNRNLKSFKTDLEVTKKLAKNYANQ-IKENSITLVSESGLFNREDLDLVKSYGADAVLVGESLMSQEDILGGVKKLVG 293 HSP 2 Score: 27.335 bits (59), Expect = 5.649e-30 Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = -1 Query: 763 SILTDEKYFKGSFENLEAVR 822 S+LTD+K+F+G F+ L VR Sbjct: 117 SVLTDKKFFQGGFDVLVEVR 136
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_SYNS9 (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain CC9902) GN=trpC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.356e-30 Identity = 66/153 (43.14%), Postives = 95/153 (62.09%), Query Frame = -2 Query: 285 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 743 PLLCKEF++ +Q++ AR GADAVLLIAA+L D D+RY+ K+ + LGL LVEVHD +E++RV TFE D++ T+ L+ R + + ++V ESGLF D+ VQ AG +AVLVGE++++Q+D + L G Sbjct: 142 PLLCKEFVLSPYQLFQARAAGADAVLLIAAILTDQDLRYLNKVAQSLGLDVLVEVHDAKELERVLAIGGFSLIGINNRDLATFETDLATTEVLVNQFR-DRLHLDTTVLVSESGLFARSDLDRVQAAGAEAVLVGEALMRQEDVESALHALVG 293 HSP 2 Score: 25.7942 bits (55), Expect = 7.356e-30 Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = -1 Query: 763 SILTDEKYFKGSFENLEAVR 822 S+LTD+++F+G F+ L VR Sbjct: 117 SVLTDKQFFQGGFDVLVQVR 136
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_PROMA (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus GN=trpC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.114e-29 Identity = 65/153 (42.48%), Postives = 96/153 (62.75%), Query Frame = -2 Query: 285 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 743 PLLCK+FI+ +QIY AR GADA+LLIAA+L D D+ Y+ KI LGL+ LVEVHD E++RV +TFE D++ T K+ E +++++++++V ESG+FT +D+ V G AVL+GES+++Q D + L G Sbjct: 142 PLLCKDFILHPYQIYQARASGADAILLIAAILSDQDLMYLNKIALSLGLSILVEVHDAAELNRVLRLGGFPLIGINNRDLKTFETDLTTTCKVAT-ECSNLLKEQDVLLVSESGIFTREDLQKVASFGASAVLIGESLMRQKDLTNALKELIG 293 HSP 2 Score: 25.0238 bits (53), Expect = 2.114e-29 Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = -1 Query: 763 SILTDEKYFKGSFENLEAVR 822 S+LTD+ +F+G F+ L VR Sbjct: 117 SVLTDKTFFQGGFDVLADVR 136
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_SYNPX (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain WH8102) GN=trpC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 2.753e-29 Identity = 65/151 (43.05%), Postives = 94/151 (62.25%), Query Frame = -2 Query: 291 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGL 743 PLLCKEF++ +Q++ AR GADAVLLIAA+L D D++Y+ K LGL LVEVHD E++RV +FE D+S T++L+E G+ ++ + ++V ESGLF D+ V+ AG AVLVGE++++Q D +T L Sbjct: 142 PLLCKEFVLSPYQLFQARAAGADAVLLIAAILTDQDLQYLKKAAAALGLDVLVEVHDAAELERVLNLGGFPLIGINNRDLTSFETDLSTTEQLME-RFGDRLQDQGSLLVSESGLFDRSDLDRVKAAGADAVLVGEALMRQQDVQSALTNL 291 HSP 2 Score: 26.5646 bits (57), Expect = 2.753e-29 Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = -1 Query: 757 SILTDEKYFKGSFENLEAVRSA 822 S+LTD+ +F+G F+ L VR A Sbjct: 117 SVLTDKTFFQGGFDVLVEVRQA 138
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_SYNPW (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain WH7803) GN=trpC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.076e-29 Identity = 64/151 (42.38%), Postives = 93/151 (61.59%), Query Frame = -2 Query: 291 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGL 743 PLLCK+FI+ Q+Y AR GADA LLIAA+L D D+ Y+ K+ LGLT LVEVHD EM+R+ +FE D++ T+ L + + + +R ++ +V ESGLF D+ VQ +G AVLVGE++++QD+ +G+ L Sbjct: 142 PLLCKDFILSPHQLYQARAAGADAALLIAAILTDQDLAYLQKVAATLGLTVLVEVHDAAEMERILTLGGFPLIGINNRDLTSFETDLATTEALTQ-QFADRLRAQDAFLVSESGLFARADLNRVQRSGAGAVLVGEALMRQDNVEQGLRDL 291 HSP 2 Score: 28.1054 bits (61), Expect = 6.076e-29 Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = -1 Query: 757 SILTDEKYFKGSFENLEAVRSA 822 S+LTD +F+G F+ L AVR A Sbjct: 117 SVLTDRTFFQGGFDVLVAVREA 138 The following BLAST results are available for this feature:
BLAST of CN185083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185083 ID=CN185083; Name=CN185083; organism=Citrus sinensis; type=EST; length=822bpback to top |