CN185083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_HAEIN (Tryptophan biosynthesis protein trpCF OS=Haemophilus influenzae GN=trpC PE=3 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 2.906e-11 Identity = 39/158 (24.68%), Postives = 73/158 (46.20%), Query Frame = -2 Query: 279 SAPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITG-LFGKD 749 S P+LCK+F++ +Q+Y AR DA+LL+ +V+ D R + + LG+ L E +E E +R VD++ +L + I ++ ++ ESG++ I +Q+ L+G S++ D + +FG++ Sbjct: 123 SQPVLCKDFMISEYQVYLARYYQVDAILLMLSVVNDETYRVLADLAHSLGMGVLTETSNEEEFERA-LALGAKIIGVNNRNLHDLTVDLNRVVELTKKYADCI--PADVRIISESGIYNHKQIHQLQKV-AHGFLIGSSLMGNQDLNNAVRSVIFGEN 276 HSP 2 Score: 32.3426 bits (72), Expect = 2.906e-11 Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = -1 Query: 763 SILTDEKYFKGSFENLEAVR 822 S+LTDEKYF+G+FE L VR Sbjct: 100 SVLTDEKYFQGNFEFLPLVR 119
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_SALTI (Tryptophan biosynthesis protein trpCF OS=Salmonella typhi GN=trpC PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 2.911e-11 Identity = 39/143 (27.27%), Postives = 68/143 (47.55%), Query Frame = -2 Query: 315 PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 743 P+LCK+FI+D +QIY AR ADA LL+ +VL D R ++ + L + L E+ ++ E +R +D++ T++L + G + V+ ESG+ T + + L+G +++ DD Sbjct: 110 PILCKDFIIDPYQIYLARYYQADACLLMLSVLDDEQYRQLSAVAHSLKMGVLTEISNDEERERA-IALGAKVVGINNRDLRDLSIDLNRTRQLAP-KLGH-----GVTVISESGINTYGQVRELSHF-ANGFLIGSALMAHDD 244 HSP 2 Score: 30.8018 bits (68), Expect = 2.911e-11 Identity = 13/19 (68.42%), Postives = 16/19 (84.21%), Query Frame = -1 Query: 766 SILTDEKYFKGSFENLEAV 822 S+LTDEKYF+GSF+ L V Sbjct: 85 SVLTDEKYFQGSFDFLPVV 103
BLAST of CN185083 vs. ExPASy Swiss-Prot
Match: TRPC_BUCAI (Tryptophan biosynthesis protein trpCF OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=trpC PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 6.366e-11 Identity = 39/143 (27.27%), Postives = 72/143 (50.35%), Query Frame = -2 Query: 321 SAPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXETFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 749 S P+LCK+F +D +Q+Y +R ADA+LL+ +VL D+ + ++ I K L + L EV++ E+ R +D++ T+ L + +K+ I++ ESG+ +I + + V L+G ++ Q Sbjct: 109 SQPVLCKDFFIDPYQVYLSRYYNADAILLMLSVLNDIQYKELSIIAKKLNMGILTEVNNIEELKRA-LKLNANIIGINNRNLHDLSIDLNRTRTL------SSLIKKDTIIISESGIKKYREIKELSKF-VNGFLIGSHLMSQ 243 HSP 2 Score: 26.9498 bits (58), Expect = 6.366e-11 Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = -1 Query: 763 SILTDEKYFKGSFENLEAVR 822 S+LTDEKYF G+ + VR Sbjct: 86 SVLTDEKYFHGNLNFINIVR 105 The following BLAST results are available for this feature:
BLAST of CN185083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185083 ID=CN185083; Name=CN185083; organism=Citrus sinensis; type=EST; length=822bpback to top |