CN185059
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 4.189e-38 Identity = 73/129 (56.59%), Postives = 87/129 (67.44%), Query Frame = -1 Query: 175 NYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGG-NAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLM 558 NYNY C P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI + W PSA D AGR+PGYG+ TNIINGGIECGQGG N A NRIGF+ T+C G G +LDCY QRP+G L+ Sbjct: 171 NYNYGLCGDDLNLPLL--QEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQRPFGYGLL 297
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.592e-37 Identity = 70/128 (54.69%), Postives = 88/128 (68.75%), Query Frame = -1 Query: 187 QLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYG 570 Q+S+NYNY NNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI W PS D GR+PG+G+ TNIINGG+EC G NA + NRIGF+ +C G+ PG++LDC NQRP+G Sbjct: 121 QISYNYNYGAAGSAIGVNLL--NNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.632e-37 Identity = 71/136 (52.21%), Postives = 93/136 (68.38%), Query Frame = -1 Query: 163 QLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQSM 570 Q+S+NYNY + NNPDL+ATD V+SFK+A WFWMT Q PKPSCH VI W PS D +AGRLPG+G+ TNIINGG+ECG+G V++RIGF+ +C + G++LDC NQRP+G L+ ++ Sbjct: 181 QISYNYNYGQAGKAIGVDLV--NNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPFGSGLLLDTI 314
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.632e-37 Identity = 68/127 (53.54%), Postives = 87/127 (68.50%), Query Frame = -1 Query: 190 QLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 570 QL+ NY R +NNPDL+ATDP++SF++AIWFWMTAQ KPSCH VII +W PS D A R+PGYG+ TNIINGG+EC G N AV +RIGF+ +CG + G++LDC NQ+ + Sbjct: 124 QLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.632e-37 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = -1 Query: 190 QLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 570 Q+S+NYNY L+NPDL+A+D +SFK+A WFWMT Q PKPSCH V+ +W P+ ND AGR+PGYG+ TNIINGG+ECG G ++ V +RIGF+ +C G+ G +LDCYNQRP+ Sbjct: 197 QISYNYNY--GPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYNQRPF 321
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.032e-36 Identity = 72/127 (56.69%), Postives = 88/127 (69.29%), Query Frame = -1 Query: 190 QLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 570 QLS NYNY L NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS D AGR PG+G+ TNIINGG+ECG G ++ V +RIGF+ +C G+ GD+LDCYNQRP+ Sbjct: 141 QLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36 Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = -1 Query: 187 NNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYG 504 NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA D A R+PGYG+ TNIINGGIECG G N AV +RIG++ +CG + PG++LDCYNQR +G Sbjct: 146 NNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.299e-36 Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = -1 Query: 190 NNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 504 NNPDL+ATD +SFK+AIWFWMTAQ KPSCH+VI +W PSA D +A R PGYG+ TNIINGGIECG+G N V +RIGF+ +C + PGD+LDCY+QR + Sbjct: 140 NNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQRNF 244
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.002e-36 Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 190 NNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 504 NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA D +A R PG G+ TNIINGGIECG G NAAV +RIG++ +CG + PGD+LDCYNQR + Sbjct: 146 NNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQRNF 250
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.002e-36 Identity = 71/127 (55.91%), Postives = 87/127 (68.50%), Query Frame = -1 Query: 190 QLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 570 QLS+N+NY L+NPDL+ATD +SFK+A+WFWMT Q KPS H+VI W PS D AGR PGYG+ TNI+NGG+ECG G + V NRIGF+ +CG FGI G +LDCYNQRP+ Sbjct: 205 QLSFNFNY--GPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329 The following BLAST results are available for this feature:
BLAST of CN185059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185059 ID=CN185059; Name=CN185059; organism=Citrus sinensis; type=EST; length=570bpback to top |