CN185059
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.734e-13 Identity = 38/121 (31.40%), Postives = 62/121 (51.24%), Query Frame = -1 Query: 208 QLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 570 QLSWNYNY C P+L++++P ++F++ +WFWM + P ++++ G+G T ING +EC G + AV RI ++ +CG+ G+ PG +L C Sbjct: 172 QLSWNYNYGACGQSLNLNLL--GQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAING-MECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.956e-13 Identity = 38/121 (31.40%), Postives = 58/121 (47.93%), Query Frame = -1 Query: 208 QLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 570 Q+SWN+NY L +PD +A PVL+F++A+W+W + H+ + G+G T ING +EC AV NR+ ++ FC +FG+ PG +L C Sbjct: 172 QISWNFNY--GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTN------NVHDAFVSG-------------QGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = -1 Query: 304 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 441 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.960e-11 Identity = 38/121 (31.40%), Postives = 57/121 (47.11%), Query Frame = -1 Query: 208 QLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 570 Q+SWNYNY L +P +A D V++FK+A+WFWM S H V+ G+G TT + +ECG A + R+G++ +C + G+ PG +L C Sbjct: 172 QISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.343e-11 Identity = 36/121 (29.75%), Postives = 56/121 (46.28%), Query Frame = -1 Query: 208 QLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 570 Q+SWNYNY +P+ +A D V++FK+A+WFWM N+V+ G+G T ING +EC A + R+G++ +C + + PG +L C Sbjct: 183 QISWNYNYGPAGRDIGFNGLA--DPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of CN185059 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.702e-11 Identity = 37/121 (30.58%), Postives = 58/121 (47.93%), Query Frame = -1 Query: 208 QLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 570 QLSWN+NY L P+ ++ D V+SFK+A+W+WM P +I++ G+G T ING +EC V+ R+ ++T +C + G+ GD+L C Sbjct: 173 QLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRP-------VINQ--------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270 The following BLAST results are available for this feature:
BLAST of CN185059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185059 ID=CN185059; Name=CN185059; organism=Citrus sinensis; type=EST; length=570bpback to top |