CN185048

Overview
NameCN185048
Unique NameCN185048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185048 vs. ExPASy Swiss-Prot
Match: THLA_STAEQ (Probable acetyl-CoA acyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0032 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.828e-37
Identity = 91/191 (47.64%), Postives = 125/191 (65.45%), Query Frame = -3
Query:  253 QDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLL 822
            QD FA  S ++   AQ AG F  EIVPVEV   +G P  I+ +DEG+       KL +LRP+FK++G +VTAGNAS I+DGAAA+++++ +K   LGLQ IA +  +  +  AP +    P  AI KA+  +    + VD +E+NEAFA  ++A  + L L  DKVNV+GGA+ALGHP+G SGAR LV+LL
Sbjct:  175 QDQFAFDSQQKASRAQQAGVFDAEIVPVEVPQRKGDP-LIISQDEGIRPQTTIDKLAQLRPAFKKDG-SVTAGNASGINDGAAAMLVMTEDKAKALGLQPIAVLDSFGASGVAPSIMGIGPVEAIHKALKRSNKVINDVDIFELNEAFAAQSIAVNRELQLPQDKVNVNGGAIALGHPIGASGARTLVSLL 363          
BLAST of CN185048 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.387e-37
Identity = 91/199 (45.73%), Postives = 126/199 (63.32%), Query Frame = -3
Query:  238 QDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA--GRGKPSTI-VDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 822
            QD FA+ S ++  +AQ  G F  EIVPV  +    +G   TI V +DEG+      + L KL+P+FK+ GG+ TAGN+S +SDGAAA++L    K  +LGL ++  +  YA     P++    PA AIP A+  AGL  + +D +EINEAFA  AL   + LG+  +KVN  GGA+ALGHPLGC+GAR +VTLL  L++
Sbjct:  199 QDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDKGDRKTITVSQDEGVRPSTTMEGLAKLKPAFKD-GGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKR 396          
BLAST of CN185048 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.387e-37
Identity = 91/199 (45.73%), Postives = 126/199 (63.32%), Query Frame = -3
Query:  238 QDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA--GRGKPSTI-VDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 822
            QD FA+ S ++  +AQ  G F  EIVPV  +    +G   TI V +DEG+      + L KL+P+FK+ GG+ TAGN+S +SDGAAA++L    K  +LGL ++  +  YA     P++    PA AIP A+  AGL  + +D +EINEAFA  AL   + LG+  +KVN  GGA+ALGHPLGC+GAR +VTLL  L++
Sbjct:  199 QDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDKGDRKTITVSQDEGVRPSTTMEGLAKLKPAFKD-GGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKR 396          
BLAST of CN185048 vs. ExPASy Swiss-Prot
Match: THL_BACSU (Acetyl-CoA acetyltransferase OS=Bacillus subtilis GN=mmgA PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.072e-37
Identity = 86/196 (43.88%), Postives = 123/196 (62.76%), Query Frame = -3
Query:  238 QDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 822
            QD++A+ S  R   A D G F  EIVPV     +GKP+ +VDKDE + +     +L KL P +  +G ++TAGNA  ++DGA A VL+S EK  +LG + +A I G++           AP  AI K +   GL    +D +E+NEAFA V L  +K++G + +KVNV+GGA+ALGHP+G SGARIL+TL+  L++
Sbjct:  175 QDEWALRSHARAAKAADEGKFQDEIVPVNWIGRKGKPN-VVDKDEAIRRDTSLDQLAKLAPIYASDG-SITAGNAPGVNDGAGAFVLMSEEKAAELGKRPLATILGFSTTGMPAHELAAAPGFAINKLLKKNGLTVQDIDLFEVNEAFASVVLTCEKIVGFDLEKVNVNGGAIALGHPIGASGARILMTLVYELKR 368          
BLAST of CN185048 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 5.319e-37
Identity = 93/199 (46.73%), Postives = 124/199 (62.31%), Query Frame = -3
Query:  238 QDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA--GRG-KPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 822
            QD FA+ S ++   AQ  G F  EIVPV  +    +G K S  V +DEG+      + L KL+P+FK++G T TAGN+S +SDGAAA++L    K  +LGL ++  +  YA     P++    PA AIP A+  AGL  S VD +EINEAFA  A    + L L P+KVN  GGAVALGHPLGC+GAR ++TLL  L++
Sbjct:  199 QDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGST-TAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKR 396          
BLAST of CN185048 vs. ExPASy Swiss-Prot
Match: THIKB_MOUSE (3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.319e-37
Identity = 90/199 (45.23%), Postives = 126/199 (63.32%), Query Frame = -3
Query:  238 QDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA--GRGKPSTI-VDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 822
            QD FA+ S ++  +AQ  G F  EIVPV  +    +G   TI V +DEG+      + L KL+P+FK+ GG+ TAGN+S +SDGAAA++L    K  +LGL ++  +  YA     P++    PA AIP A+  AGL  + +D +EINEAFA  A+   + LG+  +KVN  GGA+ALGHPLGC+GAR +VTLL  L++
Sbjct:  199 QDAFALASQQKAASAQSRGCFHAEIVPVTTTVLNDKGDKKTITVSQDEGVRPSTTMQGLAKLKPAFKD-GGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKR 396          
BLAST of CN185048 vs. ExPASy Swiss-Prot
Match: THIC_HUMAN (Acetyl-CoA acetyltransferase, cytosolic OS=Homo sapiens GN=ACAT2 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 9.072e-37
Identity = 95/197 (48.22%), Postives = 119/197 (60.41%), Query Frame = -3
Query:  238 NQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENG-GTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 825
            +QD  AVLS  R   AQ AG F  EIVPV VS  +G      D+    G    A + KL+P F  +G GTVT  NAS I+DGAAA+VL+   +  K GL  +A+I  ++     P +    P  AI +A++ AG     VD +EINEAFA V+ A  K LGLNP+KVN+ GGA+ALGHPLG SG RILVTLL  L +
Sbjct:  177 DQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEA-MSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLER 372          
BLAST of CN185048 vs. ExPASy Swiss-Prot
Match: THLA_CLOD6 (Acetyl-CoA acetyltransferase OS=Clostridium difficile (strain 630) GN=thlA PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.547e-36
Identity = 89/191 (46.60%), Postives = 122/191 (63.87%), Query Frame = -3
Query:  253 QDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLL 822
            QD+ A+ S  +   AQ  G F  EIVPV +   +G   T+VDKDE +       KL KLRP+FK++G TVTAGNAS I+DGAA LV+++ EK  +LG++ +A I  Y  A   P++    P  A  KA+  A +    +D  E NEAFA  ++A  + L ++ +KVNV+GGA+A+GHP+GCSGARIL TLL
Sbjct:  175 QDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKG--DTVVDKDEYIKPGTTMEKLAKLRPAFKKDG-TVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLL 362          
BLAST of CN185048 vs. ExPASy Swiss-Prot
Match: THIC_MOUSE (Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus GN=Acat2 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.021e-36
Identity = 93/196 (47.45%), Postives = 121/196 (61.73%), Query Frame = -3
Query:  238 QDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENG-GTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 822
            QD  AVLS  R   AQ AG F  EIVPV VS+ +G     +D+    G    A + KL+P F  +G GTVT  NAS ++DGAAA+VL+   +  +  L+ +A+I  ++ A   P +    P  AI +A++ AG     VD +EINEAFA V+ A  K LGLNP+KVN+ GGA+ALGHPLG SG RILVTLL  L +
Sbjct:  178 QDKVAVLSQNRAEHAQKAGHFDKEIVPVLVSSRKGLTEVKIDEFPRHGSNLEA-MGKLKPYFLTDGTGTVTPANASGMNDGAAAVVLMKKTEAERRMLKPLARIVSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDLFEINEAFAAVSAAIAKELGLNPEKVNIDGGAIALGHPLGASGCRILVTLLHTLER 372          
BLAST of CN185048 vs. ExPASy Swiss-Prot
Match: ATOB_PSEAE (Acetyl-CoA acetyltransferase OS=Pseudomonas aeruginosa GN=atoB PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.021e-36
Identity = 85/190 (44.74%), Postives = 119/190 (62.63%), Query Frame = -3
Query:  253 QDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLL 822
            QD FA  S ++ IAA + G F  EI P++V   +G+P      ++         L KL+P+F+++G +VTAGNASS++DGAAA++L+S  K   LGL V+A+I  YA A   P +    P  A  +A+  AG    Q+D  E NEAFA  +LA  + LG +  +VNV+GGA+ALGHP+G SG R+LVTLL
Sbjct:  175 QDAFAAASQQKAIAAIEGGRFRDEITPIQVPQRKGEPLGFDTDEQPRAGTTVEALAKLKPAFRKDG-SVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLARIASYASAGVDPAIMGIGPVSATRRALDKAGWSLEQLDLIEANEAFAAQSLAVGRELGWDAARVNVNGGAIALGHPIGASGCRVLVTLL 363          
The following BLAST results are available for this feature:
BLAST of CN185048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
THLA_STAEQ1.828e-3747.64Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THIKB_RAT2.387e-3745.733-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus n... [more]
THIKA_RAT2.387e-3745.733-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus n... [more]
THL_BACSU4.072e-3743.88Acetyl-CoA acetyltransferase OS=Bacillus subtilis ... [more]
THIK_HUMAN5.319e-3746.733-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapie... [more]
THIKB_MOUSE5.319e-3745.233-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musc... [more]
THIC_HUMAN9.072e-3748.22Acetyl-CoA acetyltransferase, cytosolic OS=Homo sa... [more]
THLA_CLOD61.547e-3646.60Acetyl-CoA acetyltransferase OS=Clostridium diffic... [more]
THIC_MOUSE2.021e-3647.45Acetyl-CoA acetyltransferase, cytosolic OS=Mus mus... [more]
ATOB_PSEAE2.021e-3644.74Acetyl-CoA acetyltransferase OS=Pseudomonas aerugi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006K06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006K06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185048 ID=CN185048; Name=CN185048; organism=Citrus sinensis; type=EST; length=827bp
TTTTTTTAAGCCAGAAAATTATTATCTTTTTATTGAAGACGAAAGCACAT
ATGAAAAAGAAACGGAGATACAATTGCACAACACCCCACCCTAATGGGCC
ATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGATAATAATCCGAAC
AGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATGCACCTCCTCCTC
CGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTCTGCCTAAGTACC
CCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCCCAGAGGATGTCC
CAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAGGATTTAGTCCAA
GCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCCTCATTTATTTCG
TAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGAAATGGCTTTAGG
TATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTGCCTGAGCAGCAT
CAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCCAGCTTAAGTACC
TTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATCACTTATACTAGA
GGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGAAACTTGGTCGAA
GCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCTTCATCCTTATCA
ACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTCAACTGGAACAAT
TTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATACCACGCTCAAAGC
TCAGAACAGCAAAGTCATCCTGATTCT
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