EY666501

Overview
NameEY666501
Unique NameEY666501
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY666501 vs. ExPASy Swiss-Prot
Match: GLYA_SHISS (Serine hydroxymethyltransferase OS=Shigella sonnei (strain Ss046) GN=glyA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 88/177 (49.72%), Postives = 114/177 (64.41%), Query Frame = 2 
Query:  212 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAPDLPHGGHLSHGYQTDTKKISAVSIFFETMPYKLNESTGYIDYDQLEKSATLFKPKLIGGGANAYA 742
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++  +L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   KPK+I GG +AY+
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYS 178
[Close]
BLAST of EY666501 vs. ExPASy Swiss-Prot
Match: GLYA_SHIFL (Serine hydroxymethyltransferase OS=Shigella flexneri GN=glyA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 88/177 (49.72%), Postives = 114/177 (64.41%), Query Frame = 2 
Query:  212 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAPDLPHGGHLSHGYQTDTKKISAVSIFFETMPYKLNESTGYIDYDQLEKSATLFKPKLIGGGANAYA 742
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++  +L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   KPK+I GG +AY+
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYS 178
[Close]
BLAST of EY666501 vs. ExPASy Swiss-Prot
Match: GLYA_SHIF8 (Serine hydroxymethyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=glyA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 88/177 (49.72%), Postives = 114/177 (64.41%), Query Frame = 2 
Query:  212 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAPDLPHGGHLSHGYQTDTKKISAVSIFFETMPYKLNESTGYIDYDQLEKSATLFKPKLIGGGANAYA 742
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++  +L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   KPK+I GG +AY+
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYS 178
[Close]
BLAST of EY666501 vs. ExPASy Swiss-Prot
Match: GLYA_SHIDS (Serine hydroxymethyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=glyA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 88/177 (49.72%), Postives = 114/177 (64.41%), Query Frame = 2 
Query:  212 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAPDLPHGGHLSHGYQTDTKKISAVSIFFETMPYKLNESTGYIDYDQLEKSATLFKPKLIGGGANAYA 742
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++  +L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   KPK+I GG +AY+
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFTVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYS 178
[Close]
BLAST of EY666501 vs. ExPASy Swiss-Prot
Match: GLYA_SHIBS (Serine hydroxymethyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=glyA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 88/177 (49.72%), Postives = 114/177 (64.41%), Query Frame = 2 
Query:  212 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAPDLPHGGHLSHGYQTDTKKISAVSIFFETMPYKLNESTGYIDYDQLEKSATLFKPKLIGGGANAYA 742
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++  +L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   KPK+I GG +AY+
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYS 178
[Close]
BLAST of EY666501 vs. ExPASy Swiss-Prot
Match: GLYA_SHIB3 (Serine hydroxymethyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=glyA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 88/177 (49.72%), Postives = 114/177 (64.41%), Query Frame = 2 
Query:  212 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAPDLPHGGHLSHGYQTDTKKISAVSIFFETMPYKLNESTGYIDYDQLEKSATLFKPKLIGGGANAYA 742
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++  +L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   KPK+I GG +AY+
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYS 178
[Close]
BLAST of EY666501 vs. ExPASy Swiss-Prot
Match: GLYA_ECOUT (Serine hydroxymethyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=glyA PE=3 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 88/177 (49.72%), Postives = 114/177 (64.41%), Query Frame = 2 
Query:  212 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAPDLPHGGHLSHGYQTDTKKISAVSIFFETMPYKLNESTGYIDYDQLEKSATLFKPKLIGGGANAYA 742
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++  +L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   KPK+I GG +AY+
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYS 178
[Close]
BLAST of EY666501 vs. ExPASy Swiss-Prot
Match: GLYA_ECOSM (Serine hydroxymethyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=glyA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 88/177 (49.72%), Postives = 114/177 (64.41%), Query Frame = 2 
Query:  212 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAPDLPHGGHLSHGYQTDTKKISAVSIFFETMPYKLNESTGYIDYDQLEKSATLFKPKLIGGGANAYA 742
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++  +L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   KPK+I GG +AY+
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYS 178
[Close]
BLAST of EY666501 vs. ExPASy Swiss-Prot
Match: GLYA_ECOSE (Serine hydroxymethyltransferase OS=Escherichia coli (strain SE11) GN=glyA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 88/177 (49.72%), Postives = 114/177 (64.41%), Query Frame = 2 
Query:  212 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAPDLPHGGHLSHGYQTDTKKISAVSIFFETMPYKLNESTGYIDYDQLEKSATLFKPKLIGGGANAYA 742
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++  +L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   KPK+I GG +AY+
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYS 178
[Close]
BLAST of EY666501 vs. ExPASy Swiss-Prot
Match: GLYA_ECOLI (Serine hydroxymethyltransferase OS=Escherichia coli (strain K12) GN=glyA PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 88/177 (49.72%), Postives = 114/177 (64.41%), Query Frame = 2 
Query:  212 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAPDLPHGGHLSHGYQTDTKKISAVSIFFETMPYKLNESTGYIDYDQLEKSATLFKPKLIGGGANAYA 742
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++  +L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   KPK+I GG +AY+
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYS 178
The following BLAST results are available for this feature:
BLAST of EY666501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_SHISS1.007e-3849.72Serine hydroxymethyltransferase OS=Shigella sonnei... [more]
GLYA_SHIFL1.007e-3849.72Serine hydroxymethyltransferase OS=Shigella flexne... [more]
GLYA_SHIF81.007e-3849.72Serine hydroxymethyltransferase OS=Shigella flexne... [more]
GLYA_SHIDS1.007e-3849.72Serine hydroxymethyltransferase OS=Shigella dysent... [more]
GLYA_SHIBS1.007e-3849.72Serine hydroxymethyltransferase OS=Shigella boydii... [more]
GLYA_SHIB31.007e-3849.72Serine hydroxymethyltransferase OS=Shigella boydii... [more]
GLYA_ECOUT1.007e-3849.72Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECOSM1.007e-3849.72Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECOSE1.007e-3849.72Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECOLI1.007e-3849.72Serine hydroxymethyltransferase OS=Escherichia col... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666501 ID=EY666501; Name=EY666501; organism=Citrus sinensis; type=EST; length=852bp
ACAACATCTTGCAGCGGGAGAGTGAGAAGCAAAAATGGCCATGGCTCTGG
CTCTTCGCAGGCTCTCATCTTCCCTCGACAAACCCACTCGTCCTCTCTTC
AATGGCTCCTCCCTCTACTACATGTCATCTTTGCCAAATGAAGCTGTTTA
CGAGAAAGAGAAAAATGGTGTCACTTGGCCAAAACAACTGAATGCTCCAC
TTGAGGTCGTTGATCCTGAGATTGCTGACATTATCGAGCATGAAAAAGCA
CGACAATGGAAGGGACTTGAACTCATTCCTTCAGAGAACTTTACTTCAGT
ATCCGTGATGCAAGCTGTGGGGTCTGTCATGACCAACAAGTACAGTGAAG
GATATCCAGGTGCAAGATATTATGGAGGAAACGAGTATATTGACATGGCG
GAATCCTTATGTCAGAAGCGAGCTCTGGAAGCATTTCGGTTGGATCCTGA
AAAATGGGGAGTGAATGTGCAGTCTCTGTCTGGATCTCCATCTAATTTTC
AAGTCTACACTGCATTGTTAAAACCTCATGATAGGATCATGGCACCTGAT
CTTCCTCATGGTGGGCATCTCTCACACGGCTATCAAACAGATACAAAAAA
GATATCTGCAGTGTCCATATTTTTTGAGACAATGCCATACAAATTGAATG
AGAGCACTGGCTATATAGACTATGACCAGTTGGAGAAAAGTGCCACCCTC
TTCAAGCCAAAATTGATTGGTGGTGGGGCTAATGCTTATGCCCAATGGAA
CAATTATGAAGCGGATTCCCAAGGGTTGGCAACAACAAAAAAGTTTAAAT
GTGGGCAAAAATGGGAAACATTTAAGGGGGTTTGGGGGCTGCCGGGGGGG
AT
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