CN185045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB2_DROER (Tubulin beta-2 chain OS=Drosophila erecta GN=betaTub85D PE=3 SV=1) HSP 1 Score: 389.808 bits (1000), Expect = 9.025e-108 Identity = 186/239 (77.82%), Postives = 204/239 (85.36%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREI+HIQ GQCGNQIG KFWEV+ EH ID TG Y GD+DLQLERINVYYNEA+ +YVPRA+L+DLEPGTMDSVRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTL L+TP++GDLNHL+SATMSGVT C Sbjct: 1 MREIVHIQAGQCGNQIGGKFWEVISDEHCIDATGTYYGDSDLQLERINVYYNEATGAKYVPRAILVDLEPGTMDSVRSGRFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB2_CAEEL (Tubulin beta-2 chain OS=Caenorhabditis elegans GN=tbb-2 PE=2 SV=1) HSP 1 Score: 389.037 bits (998), Expect = 1.539e-107 Identity = 182/239 (76.15%), Postives = 206/239 (86.19%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREI+H+Q GQCGNQIGSKFWEV+ EHGI P G ++G+TDLQLERI+VYYNEA+ G+YVPRAVL+DLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV+RKEAE CDCLQGFQ+ H ISKIREEYPDR+M +FSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC+RTL L+ P++GDLNHL+S TMSGVT C Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTC 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB6_BOVIN (Tubulin beta-6 chain OS=Bos taurus GN=TUBB6 PE=2 SV=1) HSP 1 Score: 388.267 bits (996), Expect = 2.626e-107 Identity = 184/237 (77.64%), Postives = 204/237 (86.08%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 MREI+HIQ GQCGNQIG+KFWEV+ EHGIDP G Y GD+ LQLERINVYYNE+S +YVPRA L+DLEPGTMDSVRSGP+GQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKE E+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTL L+TP++GDLNHL+SATMSGVT Sbjct: 1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVT 237
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB6_HUMAN (Tubulin beta-6 chain OS=Homo sapiens GN=TUBB6 PE=1 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 1.702e-106 Identity = 182/237 (76.79%), Postives = 204/237 (86.08%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 MREI+HIQ GQCGNQIG+KFWEV+ EHGIDP G Y GD+ LQLERINVYYNE+S +YVPRA L+DLEPGTMDSVRSGP+GQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+D+VLDVVRKE E+CDCLQGFQ+ H ISKIREE+PDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTL L+TP++GDLNHL+SATMSGVT Sbjct: 1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVT 237
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB1_BRUPA (Tubulin beta-1 chain OS=Brugia pahangi PE=3 SV=1) HSP 1 Score: 384.03 bits (985), Expect = 4.952e-106 Identity = 177/239 (74.06%), Postives = 203/239 (84.94%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREI+H+Q GQCGNQIG+KFWEV+ EHG+ P G Y+GD+DLQ+ERINVYYNEA+ G+YVPRAVL+DLEPGTMDS+R G +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV+RKEAE CDCLQGFQ+ H ISKIREEYPDR+M +FSV PSPKVSD V+EPYNATLSVHQLVEN DE +DNEALYDICFRTL L+ P++GDLNHL+S TMSGVT C Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVQPDGTYKGDSDLQIERINVYYNEANGGKYVPRAVLVDLEPGTMDSIRGGEFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDVVLEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLANPTYGDLNHLVSVTMSGVTTC 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB_COPC7 (Tubulin beta chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_04743 PE=3 SV=1) HSP 1 Score: 383.645 bits (984), Expect = 6.468e-106 Identity = 182/239 (76.15%), Postives = 201/239 (84.10%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREI+H+Q GQCGNQIG+KFWEVV EHGI+ G Y+G+ DLQLERI+VYYNE +YVPRAVL+DLEPGTMDSVRSGP G +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDRMM T+SV PSPKVSDTVVEPYNATLSVHQLVEN+DE +DNEALYDICFRTL LSTP++GDLNHL+S MSG+T C Sbjct: 1 MREIVHLQTGQCGNQIGAKFWEVVSDEHGIERDGLYKGNNDLQLERISVYYNEIGASKYVPRAVLVDLEPGTMDSVRSGPLGSLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEYPDRMMCTYSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLSTPTYGDLNHLVSIVMSGITTC 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB_UROFA (Tubulin beta chain OS=Uromyces fabae GN=TBB1 PE=3 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 8.447e-106 Identity = 181/239 (75.73%), Postives = 203/239 (84.94%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREI+H+Q GQCGNQIG+KFWEVV EHGI G+Y+G+TDLQLERI+VYYNE + +YVPRAVL+DLEPGTMDSVRSG +G +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCLQGFQ+ H ISKIREE+PDRMM TFSV PSPKVSDTVVEPYNATLSVHQLVEN+DE +DNEALYDICFRTL L+TP++GDLNHL+S MSG+T C Sbjct: 1 MREIVHLQTGQCGNQIGAKFWEVVSDEHGIATDGQYKGNTDLQLERISVYYNEVAANKYVPRAVLIDLEPGTMDSVRSGAFGSLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLATPTYGDLNHLVSIVMSGITTC 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB6_MOUSE (Tubulin beta-6 chain OS=Mus musculus GN=Tubb6 PE=1 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 8.447e-106 Identity = 182/237 (76.79%), Postives = 203/237 (85.65%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 MREI+HIQ GQCGNQIG+KFWEV+ EHGID G Y GD+ LQLERI+VYYNE+S +YVPRA L+DLEPGTMDSVRSGP+GQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKE E+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTL L+TP++GDLNHL+SATMSGVT Sbjct: 1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDQAGGYVGDSALQLERISVYYNESSSKKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVT 237
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB_MELLI (Tubulin beta chain OS=Melampsora lini GN=TUB1 PE=3 SV=1) HSP 1 Score: 382.489 bits (981), Expect = 1.441e-105 Identity = 181/239 (75.73%), Postives = 202/239 (84.52%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREI+H+Q GQCGNQIG+KFWEVV EHGI G+Y+G +DLQLERI+VYYNE + +YVPRAVL+DLEPGTMDSVRSGP+G +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCLQGFQ+ H ISKIREE+PDRMM TFSV PSPKVSDTVVEPYNATLSVHQLVEN+DE +DNEALYDICFRTL L TP++GDLNHL+S MSG+T C Sbjct: 1 MREIVHLQTGQCGNQIGAKFWEVVSDEHGIATDGQYKGTSDLQLERISVYYNEVAGNKYVPRAVLIDLEPGTMDSVRSGPFGSLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLQTPTYGDLNHLVSIVMSGITTC 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB3_DROME (Tubulin beta-3 chain OS=Drosophila melanogaster GN=betaTub60D PE=1 SV=2) HSP 1 Score: 381.333 bits (978), Expect = 3.210e-105 Identity = 180/245 (73.47%), Postives = 205/245 (83.67%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASC------GRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREI+++Q GQCGNQIG+KFWE++ EHGID G Y GD+DLQLER++VYYNEAS G+YVPRA+L+DLEPGTM+SVRSGPYGQ+FRPDNFV+GQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE ENCDCLQGFQ+ H ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTL +S PS+GDLNHL+S TMSGVT C Sbjct: 1 MREIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTC 245 The following BLAST results are available for this feature:
BLAST of CN185045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185045 ID=CN185045; Name=CN185045; organism=Citrus sinensis; type=EST; length=787bpback to top |