CN185045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA_BOMMO (Tubulin alpha chain OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.118e-52 Identity = 96/239 (40.17%), Postives = 147/239 (61.51%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 MRE + + GQ G QIG+ WE+ C EHGI P G+ D + + N +++E G++VPRA+ +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRALFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEPPTYTNLNRLIGQIVSSIT 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA3_HOMAM (Tubulin alpha-3 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.118e-52 Identity = 96/239 (40.17%), Postives = 147/239 (61.51%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 MRE + I GQ G Q+G+ WE+ C EHGI P G+ D + + N ++ E G++VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+NC LQGF + H + ++ +Y + L F+++P+P+V+ VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T Sbjct: 1 MRECISIHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFCETGAGKHVPRAVFVDLEPTVIDEIRTGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADNCAGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 5.378e-52 Identity = 97/239 (40.59%), Postives = 147/239 (61.51%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 MRE + I GQ G QIG+ WE+ C EHGI P G+ D + + N +++E G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A +N+A+GHYT G E++D VLD +RK A+ C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAASNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA2_DROME (Tubulin alpha-2 chain OS=Drosophila melanogaster GN=alphaTub85E PE=1 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.378e-52 Identity = 98/239 (41.00%), Postives = 146/239 (61.09%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 MRE + + GQ G QIG+ WE+ C EHGI P G D + + + +++E G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF V H + ++ +Y + L FS++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T Sbjct: 1 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSIT 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA2_STYLE (Tubulin alpha-2 chain OS=Stylonychia lemnae PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.024e-52 Identity = 97/239 (40.59%), Postives = 147/239 (61.51%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 MRE++ I GQ G Q+G+ WE+ C EHGI P G+ + + + N +++E G++VPR V +DL P +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD +RK A+ C LQGF V + + ++ +Y + L F+++PSP+VS VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R L + P++ +LN LI+ +S +T Sbjct: 1 MREVISIHVGQAGIQVGNACWELFCLEHGIQPDGQMPSNKTIGGGDDAFNTFFSETGTGKHVPRCVFLDLGPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDGIRKLADQCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYTNLNRLIAQVISSLT 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA_GLOLA (Tubulin alpha chain OS=Glomerella lagenarium GN=TUB1 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.198e-51 Identity = 95/237 (40.08%), Postives = 145/237 (61.18%), Query Frame = 2 Query: 77 EILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLE--RINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 EILH+ GQ G Q+G+ WE+ EHG+ G+ ++ ++ E S G+YVPR++ +DL+P +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D+V+D +R+ A+NC LQGF + H + ++ EY + L F+V+P+P+VS VVEPYNA LS H +EN+D ++DNEA+YDIC R L + PS+ LN LI+ +S +T Sbjct: 4 EILHLHLGQAGTQLGNSAWELYLLEHGLGHDGRPDPSAKDVVDGGSYETFFTETSNGKYVPRSLFVDLDPSPIDEIRTGGYRQLFHPELLISGKEDAANNYARGHYTIGKEMVDNVIDRIRRVADNCHSLQGFLIFHSFGGGTGSGFGALLLERLSTEYGKKSKLEFAVYPAPRVSTAVVEPYNAVLSTHSTIENSDCTFLVDNEAVYDICRRNLDIPRPSYDHLNRLIAQVVSSIT 240
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.565e-51 Identity = 97/239 (40.59%), Postives = 148/239 (61.92%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 MRE+L I GQ G Q+G+ WE+ C EHGI+P G D + + + + +++E S G+ VPR V +DLE G +D V++G Y ++ P+ + G A NN+A+GHYT G E+I+ LD +RK ENC LQGF + + + ++ +Y + L F+V+PSP+VS VVEPYN+ L+ H L+E+ D +VLDNEA+Y+IC R+L + P++ +LN LI+ +S +T Sbjct: 1 MREVLSIHIGQAGIQVGNACWELYCLEHGINPDGSIIQDFNKKKNDDAFSTFFSETSTGKRVPRCVFLDLESGVIDEVKNGRYKNLYHPEQLICGNEDAANNYARGHYTIGKEIIEIALDRIRKLVENCSGLQGFLIFNSVGGGTGSGLGSLLLERLSLDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLATHSLLEHTDVAVVLDNEAIYEICQRSLNIERPTYTNLNRLIAQVISSIT 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA2_HOMAM (Tubulin alpha-2 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.565e-51 Identity = 96/239 (40.17%), Postives = 146/239 (61.09%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 MRE + I GQ G Q+G+ WE+ C EHGI P G+ D + + + N ++ E G++VPRAV +DLEP +D VRSG Y Q+F P+ + G+ A NN+A+GHYT G E +D VLD +RK A+ C LQGF + + ++ EY + L +++P+P+ + +VVEPYN+ L+ H +E++D C ++DNEA++DIC R L +S P++ +LN LI +S +T Sbjct: 1 MRECISIHVGQAGVQMGNSCWELYCLEHGIQPDGQMPSDKTVGVCNDSFNTFFTETGSGKHVPRAVFVDLEPSVIDEVRSGIYRQLFHPEQLISGKEDAANNYARGHYTIGKEYVDIVLDRIRKLADQCTGLQGFLIFRSFGGGTGSGFASLLMERLSVEYGKKSKLEIAIYPAPQSATSVVEPYNSILTTHTTLEHSDCCFMVDNEAIFDICQRNLDVSRPTYTNLNRLIGQIVSSIT 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.044e-51 Identity = 92/237 (38.82%), Postives = 148/237 (62.45%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 MRE++ + GQ G QIG+ WE+ EHG+ P G+ D+ + + + +++E G++VPR + +DLEPG +D V++GPY +F P+ + G+ A NN+A+GHYT G ELID V+D +R+ A+NC QG V H + ++ +Y + L F V+P+P++S +VVEPYN+ L+ H +E++D ++DNEA+YDIC + L ++ P F +LN LI+ +S +T Sbjct: 1 MREVISVHVGQAGVQIGNACWELYTLEHGLSPDGRLMDDSPSKHDSGSTFFSETGQGKHVPRRLYVDLEPGVIDDVKNGPYRSLFHPETMITGKEDAANNYARGHYTVGKELIDPVMDKLRRLADNCSGRQGLFVFHSFGGGTGSGFGALLLERLSTDYGKKAKLEFCVYPAPQLSSSVVEPYNSLLTTHTTLEHSDCSFMVDNEAIYDICKKNLGVAQPGFTNLNRLIAQVVSSIT 237
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA_ASHGO (Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.669e-51 Identity = 99/241 (41.08%), Postives = 148/241 (61.41%), Query Frame = 2 Query: 71 MREILHIQG-GQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL---ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 MRE++ + GQ G QIG+ WE+ EHGI P G Q E + ++NE G++VPRAV +DLEP +D VR+G Y ++F P+ + G+ A NN+A+GHYT G EL+D +LD +RK ++ CD LQGF H + ++ +Y + L F+V+P+P+VS +VVEPYN L+ H +E+AD ++DNEA+Y++C + L +S PSF +LN+LI+ +S VT Sbjct: 1 MREVISVNAVGQAGCQIGNACWELYSLEHGIRPDGYLQEGLTKPKGGEEGFSTFFNETGSGKFVPRAVYVDLEPNVIDEVRTGAYRELFHPEQLISGKEDAANNYARGHYTVGRELLDDILDRIRKISDQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSIDYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHTTLEHADCTFMVDNEAIYEMCKKNLDISRPSFANLNNLIAQVVSSVT 241 The following BLAST results are available for this feature:
BLAST of CN185045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185045 ID=CN185045; Name=CN185045; organism=Citrus sinensis; type=EST; length=787bpback to top |