CN185045

Overview
NameCN185045
Unique NameCN185045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA_BOMMO (Tubulin alpha chain OS=Bombyx mori PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.118e-52
Identity = 96/239 (40.17%), Postives = 147/239 (61.51%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781
            MRE + +  GQ G QIG+  WE+ C EHGI P G+   D  +    +  N +++E   G++VPRA+ +DLEP  +D VR+G Y Q+F P+  + G+  A NN+A+GHYT G E++D VLD +RK A+ C  LQGF + H              + ++  +Y  +  L F+++P+P+VS  VVEPYN+ L+ H  +E++D   ++DNEA+YDIC R L +  P++ +LN LI   +S +T
Sbjct:    1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRALFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEPPTYTNLNRLIGQIVSSIT 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA3_HOMAM (Tubulin alpha-3 chain OS=Homarus americanus PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.118e-52
Identity = 96/239 (40.17%), Postives = 147/239 (61.51%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781
            MRE + I  GQ G Q+G+  WE+ C EHGI P G+   D  +    +  N ++ E   G++VPRAV +DLEP  +D +R+G Y Q+F P+  + G+  A NN+A+GHYT G E++D VLD +RK A+NC  LQGF + H              + ++  +Y  +  L F+++P+P+V+  VVEPYN+ L+ H  +E++D   ++DNEA+YDIC R L +  P++ +LN LI   +S +T
Sbjct:    1 MRECISIHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFCETGAGKHVPRAVFVDLEPTVIDEIRTGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADNCAGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 5.378e-52
Identity = 97/239 (40.59%), Postives = 147/239 (61.51%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781
            MRE + I  GQ G QIG+  WE+ C EHGI P G+   D  +    +  N +++E   G++VPRAV +DLEP  +D VR+G Y Q+F P+  + G+  A +N+A+GHYT G E++D VLD +RK A+ C  LQGF + H              + ++  +Y  +  L F+++P+P+VS  VVEPYN+ L+ H  +E++D   ++DNEA+YDIC R L +  P++ +LN LI   +S +T
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAASNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA2_DROME (Tubulin alpha-2 chain OS=Drosophila melanogaster GN=alphaTub85E PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.378e-52
Identity = 98/239 (41.00%), Postives = 146/239 (61.09%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781
            MRE + +  GQ G QIG+  WE+ C EHGI P G    D  +    +  + +++E   G++VPRAV +DLEP  +D VR+G Y Q+F P+  + G+  A NN+A+GHYT G E++D VLD +RK A+ C  LQGF V H              + ++  +Y  +  L FS++P+P+VS  VVEPYN+ L+ H  +E++D   ++DNEA+YDIC R L +  P++ +LN LI   +S +T
Sbjct:    1 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSIT 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA2_STYLE (Tubulin alpha-2 chain OS=Stylonychia lemnae PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.024e-52
Identity = 97/239 (40.59%), Postives = 147/239 (61.51%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781
            MRE++ I  GQ G Q+G+  WE+ C EHGI P G+   +  +    +  N +++E   G++VPR V +DL P  +D VR+G Y Q+F P+  + G+  A NN+A+GHYT G E++D  LD +RK A+ C  LQGF V +              + ++  +Y  +  L F+++PSP+VS  VVEPYN+ LS H L+E+ D  ++LDNEA+YDIC R L +  P++ +LN LI+  +S +T
Sbjct:    1 MREVISIHVGQAGIQVGNACWELFCLEHGIQPDGQMPSNKTIGGGDDAFNTFFSETGTGKHVPRCVFLDLGPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDGIRKLADQCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYTNLNRLIAQVISSLT 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA_GLOLA (Tubulin alpha chain OS=Glomerella lagenarium GN=TUB1 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.198e-51
Identity = 95/237 (40.08%), Postives = 145/237 (61.18%), Query Frame = 2
Query:   77 EILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLE--RINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781
            EILH+  GQ G Q+G+  WE+   EHG+   G+        ++      ++ E S G+YVPR++ +DL+P  +D +R+G Y Q+F P+  + G+  A NN+A+GHYT G E++D+V+D +R+ A+NC  LQGF + H              + ++  EY  +  L F+V+P+P+VS  VVEPYNA LS H  +EN+D   ++DNEA+YDIC R L +  PS+  LN LI+  +S +T
Sbjct:    4 EILHLHLGQAGTQLGNSAWELYLLEHGLGHDGRPDPSAKDVVDGGSYETFFTETSNGKYVPRSLFVDLDPSPIDEIRTGGYRQLFHPELLISGKEDAANNYARGHYTIGKEMVDNVIDRIRRVADNCHSLQGFLIFHSFGGGTGSGFGALLLERLSTEYGKKSKLEFAVYPAPRVSTAVVEPYNAVLSTHSTIENSDCTFLVDNEAVYDICRRNLDIPRPSYDHLNRLIAQVVSSIT 240          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.565e-51
Identity = 97/239 (40.59%), Postives = 148/239 (61.92%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781
            MRE+L I  GQ G Q+G+  WE+ C EHGI+P G    D + +   +  + +++E S G+ VPR V +DLE G +D V++G Y  ++ P+  + G   A NN+A+GHYT G E+I+  LD +RK  ENC  LQGF + +              + ++  +Y  +  L F+V+PSP+VS  VVEPYN+ L+ H L+E+ D  +VLDNEA+Y+IC R+L +  P++ +LN LI+  +S +T
Sbjct:    1 MREVLSIHIGQAGIQVGNACWELYCLEHGINPDGSIIQDFNKKKNDDAFSTFFSETSTGKRVPRCVFLDLESGVIDEVKNGRYKNLYHPEQLICGNEDAANNYARGHYTIGKEIIEIALDRIRKLVENCSGLQGFLIFNSVGGGTGSGLGSLLLERLSLDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLATHSLLEHTDVAVVLDNEAIYEICQRSLNIERPTYTNLNRLIAQVISSIT 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA2_HOMAM (Tubulin alpha-2 chain OS=Homarus americanus PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.565e-51
Identity = 96/239 (40.17%), Postives = 146/239 (61.09%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781
            MRE + I  GQ G Q+G+  WE+ C EHGI P G+   D  + +  +  N ++ E   G++VPRAV +DLEP  +D VRSG Y Q+F P+  + G+  A NN+A+GHYT G E +D VLD +RK A+ C  LQGF +                + ++  EY  +  L  +++P+P+ + +VVEPYN+ L+ H  +E++D C ++DNEA++DIC R L +S P++ +LN LI   +S +T
Sbjct:    1 MRECISIHVGQAGVQMGNSCWELYCLEHGIQPDGQMPSDKTVGVCNDSFNTFFTETGSGKHVPRAVFVDLEPSVIDEVRSGIYRQLFHPEQLISGKEDAANNYARGHYTIGKEYVDIVLDRIRKLADQCTGLQGFLIFRSFGGGTGSGFASLLMERLSVEYGKKSKLEIAIYPAPQSATSVVEPYNSILTTHTTLEHSDCCFMVDNEAIFDICQRNLDVSRPTYTNLNRLIGQIVSSIT 239          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.044e-51
Identity = 92/237 (38.82%), Postives = 148/237 (62.45%), Query Frame = 2
Query:   71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781
            MRE++ +  GQ G QIG+  WE+   EHG+ P G+   D+  + +  + +++E   G++VPR + +DLEPG +D V++GPY  +F P+  + G+  A NN+A+GHYT G ELID V+D +R+ A+NC   QG  V H              + ++  +Y  +  L F V+P+P++S +VVEPYN+ L+ H  +E++D   ++DNEA+YDIC + L ++ P F +LN LI+  +S +T
Sbjct:    1 MREVISVHVGQAGVQIGNACWELYTLEHGLSPDGRLMDDSPSKHDSGSTFFSETGQGKHVPRRLYVDLEPGVIDDVKNGPYRSLFHPETMITGKEDAANNYARGHYTVGKELIDPVMDKLRRLADNCSGRQGLFVFHSFGGGTGSGFGALLLERLSTDYGKKAKLEFCVYPAPQLSSSVVEPYNSLLTTHTTLEHSDCSFMVDNEAIYDICKKNLGVAQPGFTNLNRLIAQVVSSIT 237          
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBA_ASHGO (Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.669e-51
Identity = 99/241 (41.08%), Postives = 148/241 (61.41%), Query Frame = 2
Query:   71 MREILHIQG-GQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQL---ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781
            MRE++ +   GQ G QIG+  WE+   EHGI P G  Q          E  + ++NE   G++VPRAV +DLEP  +D VR+G Y ++F P+  + G+  A NN+A+GHYT G EL+D +LD +RK ++ CD LQGF   H              + ++  +Y  +  L F+V+P+P+VS +VVEPYN  L+ H  +E+AD   ++DNEA+Y++C + L +S PSF +LN+LI+  +S VT
Sbjct:    1 MREVISVNAVGQAGCQIGNACWELYSLEHGIRPDGYLQEGLTKPKGGEEGFSTFFNETGSGKFVPRAVYVDLEPNVIDEVRTGAYRELFHPEQLISGKEDAANNYARGHYTVGRELLDDILDRIRKISDQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSIDYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHTTLEHADCTFMVDNEAIYEMCKKNLDISRPSFANLNNLIAQVVSSVT 241          
The following BLAST results are available for this feature:
BLAST of CN185045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 423
Match NameE-valueIdentityDescription
TBA_BOMMO4.118e-5240.17Tubulin alpha chain OS=Bombyx mori PE=2 SV=1[more]
TBA3_HOMAM4.118e-5240.17Tubulin alpha-3 chain OS=Homarus americanus PE=2 S... [more]
TBA3E_HUMAN5.378e-5240.59Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E P... [more]
TBA2_DROME5.378e-5241.00Tubulin alpha-2 chain OS=Drosophila melanogaster G... [more]
TBA2_STYLE7.024e-5240.59Tubulin alpha-2 chain OS=Stylonychia lemnae PE=3 S... [more]
TBA_GLOLA1.198e-5140.08Tubulin alpha chain OS=Glomerella lagenarium GN=TU... [more]
TBAN_GUITH1.565e-5140.59Tubulin alpha chain, nucleomorph OS=Guillardia the... [more]
TBA2_HOMAM1.565e-5140.17Tubulin alpha-2 chain OS=Homarus americanus PE=2 S... [more]
TBAB_SCHCO2.044e-5138.82Tubulin alpha-1B chain OS=Schizophyllum commune GN... [more]
TBA_ASHGO2.669e-5141.08Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006K04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006K04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185045 ID=CN185045; Name=CN185045; organism=Citrus sinensis; type=EST; length=787bp
GAGGAAAGGAAGAATCCCCTGAAAATATCCTCTGCAAATCTCGCTAATCA
AGAAACCCCAAAAGAAGAAAATGCGTGAAATCCTTCACATTCAAGGGGGC
CAATGCGGGAACCAAATCGGATCCAAGTTCTGGGAAGTGGTTTGCGCCGA
GCACGGCATAGACCCGACCGGAAAGTATCAAGGGGATACCGATTTGCAGC
TTGAGAGGATTAATGTGTATTACAACGAGGCAAGTTGCGGGAGATACGTG
CCTAGGGCCGTGCTCATGGATCTTGAACCTGGGACCATGGATAGCGTCAG
GTCTGGTCCGTACGGTCAGGTTTTTAGGCCCGACAATTTTGTCTTTGGCC
AGTCCGGCGCCGGAAACAACTGGGCGAAGGGGCATTATACTGAAGGAGCT
GAGCTGATTGATTCTGTGCTTGATGTTGTTCGTAAAGAAGCCGAGAACTG
CGATTGCTTGCAGGGATTTCAGGTGTGCCATTCTCTGGGAGGAGGGACGG
GTTCCGGGATGGGAACTTTGTTGATATCAAAGATAAGAGAGGAATACCCG
GATAGAATGATGCTTACTTTCTCAGTTTTCCCATCTCCTAAGGTCTCTGA
TACTGTTGTTGAGCCTTACAACGCTACTCTCTCTGTACATCAGCTAGTTG
AAAATGCAGATGAGTGTATGGTTCTTGATAATGAAGCCCTTTATGACATC
TGTTTCCGCACTCTCNAACTCAGCACTCCAAGCTTTGGTGATCTGAATCA
TTTGATATCTGCTACAATGTCTGGAGTTACCTGTTGT
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