CN185045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB1_DAUCA (Tubulin beta-1 chain (Fragment) OS=Daucus carota GN=TUBB1 PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.420e-44 Identity = 89/106 (83.96%), Postives = 90/106 (84.91%), Query Frame = 2 Query: 467 FQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTC 784 FQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENAD CMVLDNEALYDICFRTL L+TPSFGDLNHLISATMSGVTC Sbjct: 1 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADVCMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 106
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBG_EUPAE (Tubulin gamma chain OS=Euplotes aediculatus PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.390e-44 Identity = 90/238 (37.82%), Postives = 140/238 (58.82%), Query Frame = 2 Query: 74 REILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 REI+ Q GQCGNQIG +FW+ +C EHGI+P G + +R +V++ +A YVPRAVL+DLEP ++ ++ Y ++ P+N + GAGNNW +G YT+ ++ D +L+++ +EA+ D L+GF + H + +I + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I L + P+F +N ++S M+ T Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEGILEDFAVNGEDRKDVFFYQADDEHYVPRAVLIDLEPRVINCIQKSTYSSLYNPENIYIAKHGGGAGNNWGRG-YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERINDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAAST 237
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBG_DICDI (Tubulin gamma chain OS=Dictyostelium discoideum GN=tubC PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.390e-44 Identity = 87/238 (36.55%), Postives = 141/238 (59.24%), Query Frame = 2 Query: 74 REILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 REI+ +Q GQCGNQIGS+FW+ +C EHGI+ G + ++R +V++ ++ YVPRA+L+DLEP +DS+++ Y ++ +N + +GAGNNWA G Y +G D + D++ +EA+ + L+GF + H + ++ + +P +++ T+SVFP S VV+ YN+ L++ +L+ENAD +VLDN AL+ I L + P+ N L+S MS T Sbjct: 3 REIITLQVGQCGNQIGSEFWKQLCKEHGINAAGYLEEFAKPGIDRKDVFFYQSDDDHYVPRALLLDLEPRVIDSIKTSEYSGLYNQENIFVAEKGTGAGNNWANG-YKQGESFYDDIFDMIDREADGSESLEGFLLTHSISGGTGSGMGSYILERLNDRFPKKIIQTYSVFPDD--SSVVVQQYNSVLTLKRLIENADSTVVLDNNALHRIVGENLRIDQPTMDQTNSLVSTVMSAST 237
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBG2_MAIZE (Tubulin gamma-2 chain OS=Zea mays GN=TUBG2 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.390e-44 Identity = 90/239 (37.66%), Postives = 142/239 (59.41%), Query Frame = 2 Query: 74 REILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 REI+ IQ GQCGNQIG +FW+ +C EHGI G + +R +V++ +A ++PR++L+DLEP ++ +++ Y ++ +N + GAGNNWA G Y +G +++D ++D+V +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L LS P+F N L+S MS T Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHFIPRSLLIDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDMVDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSAST 240
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBG1_EUPCR (Tubulin gamma-1 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.390e-44 Identity = 88/238 (36.97%), Postives = 142/238 (59.66%), Query Frame = 2 Query: 74 REILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 REI+ Q GQCGNQIG +FW+ +C EHGI+P G + +R +V++ +A YVPRAVL+DLEP ++ ++ PY ++ P+N + GAGNNW +G Y + ++ + +++++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP+ +D VV+PYN LS+ +L+ NAD +VLDN AL I L L P+F +N ++S M+ T Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEGILEEYAQNGEDRKDVFFYQADDEHYVPRAVLIDLEPRVINGIQKSPYASLYNPENIFISKHGGGAGNNWGRG-YCDAEKVQEEIIEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPNE--NDVVVQPYNCLLSMKRLILNADCVVVLDNTALTSIAVDRLKLLQPTFPQINSIVSTVMAAST 237
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBG2_EUPOC (Tubulin gamma-2 chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.040e-44 Identity = 89/238 (37.39%), Postives = 140/238 (58.82%), Query Frame = 2 Query: 74 REILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 REI+ Q GQCGNQIG +FW+ +C EHGI+P G + +R +V++ +A YVPRAVL+DLEP ++ ++ Y ++ P+N + GAGNNW +G YT+ ++ D +L+++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I L + P+F +N ++S M+ T Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEGILEDFAVNGEDRKDVFFYQADDEHYVPRAVLIDLEPRVINGIQKSAYSSLYNPENIYIAKHGGGAGNNWGRG-YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAAST 237
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBG1_MAIZE (Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.040e-44 Identity = 90/239 (37.66%), Postives = 141/239 (59.00%), Query Frame = 2 Query: 74 REILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 REI+ IQ GQCGNQIG +FW+ +C EHGI G + +R +V++ +A ++PR++L+DLEP ++ +++ Y ++ +N + GAGNNWA G Y +G + +D ++D+V +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L LS P+F N L+S MS T Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHFIPRSLLIDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQFVDDIMDMVDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSAST 240
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBG1_EUPOC (Tubulin gamma-1 chain OS=Euplotes octocarinatus PE=2 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 7.040e-44 Identity = 89/238 (37.39%), Postives = 140/238 (58.82%), Query Frame = 2 Query: 74 REILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 REI+ Q GQCGNQIG +FW+ +C EHGI+P G + +R +V++ +A YVPRAVL+DLEP ++ ++ Y ++ P+N + GAGNNW +G YT+ ++ D +L+++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I L + P+F +N ++S M+ T Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEGILEDFAVNGEDRKDVFFYQADDEHYVPRAVLIDLEPRVINGIQKSAYSSLYNPENIYIAKHGGGAGNNWGRG-YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAAST 237
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.563e-43 Identity = 89/239 (37.24%), Postives = 140/239 (58.58%), Query Frame = 2 Query: 74 REILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 REI+ +Q GQCGNQIG +FW+ +C EHGI G + +R +V++ +A Y+PRA+L+DLEP ++ +++G Y ++ +N GAGNNWA G Y +G + + ++D++ +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L L+ P+F N L+S MS T Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSAST 240
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBG1_ARATH (Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=TUBG1 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.783e-43 Identity = 89/239 (37.24%), Postives = 140/239 (58.58%), Query Frame = 2 Query: 74 REILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 REI+ +Q GQCGNQIG +FW+ +C EHGI G + +R +V++ +A Y+PRA+L+DLEP ++ +++G Y ++ +N GAGNNWA G Y +G + + ++D++ +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L L+ P+F N L+S MS T Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSAST 240 The following BLAST results are available for this feature:
BLAST of CN185045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185045 ID=CN185045; Name=CN185045; organism=Citrus sinensis; type=EST; length=787bpback to top |