CN185045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB_STYLE (Tubulin beta chain OS=Stylonychia lemnae GN=TUBB1 PE=3 SV=1) HSP 1 Score: 412.535 bits (1059), Expect = 1.300e-114 Identity = 195/239 (81.59%), Postives = 212/239 (88.70%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREI+HIQGGQCGNQIG+KFWEV+ EHGIDPTG Y GD+DLQLERINVYYNEA+ GRYVPRAVLMDLEPGTMDSVR+GP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVENADE M +DNEALYDICFRTL L+TP++GDLNHL+SA +SGVTCC Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMATFSVVPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDICFRTLKLTTPTYGDLNHLVSAGISGVTCC 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB_EUPCR (Tubulin beta chain OS=Euplotes crassus PE=3 SV=1) HSP 1 Score: 411.379 bits (1056), Expect = 2.897e-114 Identity = 194/239 (81.17%), Postives = 213/239 (89.12%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREI+H+QGGQCGNQIG+KFWEV+ EHG+DPTG Y GD+DLQLERINVYYNEA+ GRYVPRAVLMDLEPGTMDSVR+GP+GQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE MV+DNEALYDICFRTL L+TP++GDLNHL+SA +SGVT C Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTSC 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB7_GOSHI (Tubulin beta-7 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 411.379 bits (1056), Expect = 2.897e-114 Identity = 195/239 (81.59%), Postives = 208/239 (87.03%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREILH+Q GQCGNQIG KFWEVV EHGIDP G Y G + +QLER+NVYYNEAS GRYVPRAVLMDLEPGTMDS+R+GP+GQ+FRPDNF+FGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAENC CLQGFQ+CH ISKI+EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN DECMVLDNEALYDICFRTL L+ PSFGDLN LIS TMSG TCC Sbjct: 1 MREILHVQAGQCGNQIGGKFWEVVSDEHGIDPKGNYVGTSRVQLERVNVYYNEASGGRYVPRAVLMDLEPGTMDSLRTGPHGQLFRPDNFIFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCACLQGFQICHSLGGGTGSGMGTLLISKIKEEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENGDECMVLDNEALYDICFRTLKLTNPSFGDLNRLISTTMSGATCC 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB_TOXGO (Tubulin beta chain OS=Toxoplasma gondii PE=3 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 4.941e-114 Identity = 192/239 (80.33%), Postives = 213/239 (89.12%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREI+H+QGGQCGNQIG+KFWEV+ EHGIDPTG Y GD+DLQLERINV+YNEA+ GR+VPRA+LMDLEPGTMDSVR+GP+GQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISK+REEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTL L+TP++GDLNHL+SA MSGVTCC Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGIDPTGTYCGDSDLQLERINVFYNEATGGRFVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCC 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB_EUPOC (Tubulin beta chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 410.223 bits (1053), Expect = 6.453e-114 Identity = 193/239 (80.75%), Postives = 213/239 (89.12%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREI+H+QGGQCGNQIG+KFWEV+ EHG++PTG Y GD+DLQLERINVYYNEA+ GRYVPRAVLMDLEPGTMDSVR+GP+GQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE MV+DNEALYDICFRTL L+TP++GDLNHL+SA +SGVT C Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGVEPTGAYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTAC 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB_TRYCR (Tubulin beta chain OS=Trypanosoma cruzi PE=3 SV=2) HSP 1 Score: 407.527 bits (1046), Expect = 4.183e-113 Identity = 188/239 (78.66%), Postives = 212/239 (88.70%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREI+ +Q GQCGNQIGSKFWEV+ EHG+DPTG YQGD+DLQLERINVY++EA+ GRYVPRAVL+DLEPGTMDSVR+GPYGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELIDSVLDV RKEAE+CDCLQGFQ+CH ISK+REEYPDR+M+TFS+ PSPKVSDTVVEPYN TLSVHQLVEN+DE M +DNEALYDICFRTL L+TP+FGDLNHL+SA +SGVTCC Sbjct: 1 MREIVCVQAGQCGNQIGSKFWEVISDEHGVDPTGTYQGDSDLQLERINVYFDEATGGRYVPRAVLIDLEPGTMDSVRAGPYGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELIDSVLDVCRKEAESCDCLQGFQICHSLGGGTGSGMGTLLISKLREEYPDRIMMTFSIIPSPKVSDTVVEPYNTTLSVHQLVENSDESMCIDNEALYDICFRTLKLTTPTFGDLNHLVSAVVSGVTCC 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB_EIMTE (Tubulin beta chain OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 407.142 bits (1045), Expect = 5.463e-113 Identity = 193/238 (81.09%), Postives = 212/238 (89.08%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTC 784 MREI+H+QGGQCGNQIG+KFWEV+ EHGI PTG Y+GD+DLQLERI+V+YNEA+ GRYVPRAVLMDLEPGTMDSVRSGP+GQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQV H ISK+REEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTL L+TP++GDLNHL+SA MSGVTC Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGIAPTGTYKGDSDLQLERISVFYNEATGGRYVPRAVLMDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQVTHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTC 238
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB1_PHYPO (Tubulin beta-1 chain OS=Physarum polycephalum GN=BETA PE=1 SV=4) HSP 1 Score: 406.757 bits (1044), Expect = 7.135e-113 Identity = 191/239 (79.92%), Postives = 211/239 (88.28%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MREI+HIQ GQCGNQIG+KFWEV+ EHGIDPTG Y G++DLQLERINVYYNEA+ G+YVPRAVL+DLEPGTMDSVR+GP+GQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDRMM TFSV PSPKVSDTVVEPYNATLSVHQLVENADE M +DNEALYDI FRTL L+TP++GDLNHL+SA MSG+TCC Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGESDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMCTFSVVPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDISFRTLKLTTPTYGDLNHLVSAVMSGITCC 239
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB4_OOMCK (Tubulin beta-4 chain OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB4 PE=3 SV=1) HSP 1 Score: 406.371 bits (1043), Expect = 9.318e-113 Identity = 194/237 (81.86%), Postives = 210/237 (88.61%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVT 781 MREI+HIQGGQCG+QIG+KFWEV+ EHGIDPTG Y GD+DLQLER+NVYYNEA+ GRYVPRAVLMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQV H ISKIREEYPDR+M+TFSV PSPKVSDTVVEPYNATLSVHQLVENADE MVLDNEALYDICFRTL L+TP++GDLNHL+ MSGVT Sbjct: 1 MREIVHIQGGQCGDQIGAKFWEVISDEHGIDPTGTYNGDSDLQLERVNVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEQCDCLQGFQVTHSLGGGTGSGMGTLLISKIREEYPDRVMMTFSVCPSPKVSDTVVEPYNATLSVHQLVENADEVMVLDNEALYDICFRTLKLTTPTYGDLNHLVCVCMSGVT 237
BLAST of CN185045 vs. ExPASy Swiss-Prot
Match: TBB_PHYCI (Tubulin beta chain OS=Phytophthora cinnamomi PE=3 SV=1) HSP 1 Score: 405.986 bits (1042), Expect = 1.217e-112 Identity = 190/239 (79.50%), Postives = 210/239 (87.87%), Query Frame = 2 Query: 71 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLXLSTPSFGDLNHLISATMSGVTCC 787 MRE++HIQGGQCGNQIG+KFWEV+ EHG+DPTG Y GD+DLQLERINVYYNEA+ GRYVPRA+LMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVENADE M LDNEALYDICFRTL L+ P++GDLNHL+ A MSG+T C Sbjct: 1 MRELVHIQGGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMCTYSVCPSPKVSDTVVEPYNATLSVHQLVENADEVMCLDNEALYDICFRTLKLTNPTYGDLNHLVCAAMSGITTC 239 The following BLAST results are available for this feature:
BLAST of CN185045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185045 ID=CN185045; Name=CN185045; organism=Citrus sinensis; type=EST; length=787bpback to top |