CN185032

Overview
NameCN185032
Unique NameCN185032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYT7_ORYSJ (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica GN=Os03g0210100 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.357e-12
Identity = 45/119 (37.82%), Postives = 69/119 (57.98%), Query Frame = 1
Query:   40 MNQRFCCLIVLFLSVVPLLAAGDRKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQ-SKSALKFESVEKGETQVVSGTNYRLIL-VVKDGPSTKKFEAVVWEK-PWEHFKSLTSFKPM 387
            M  R   L++  ++VV ++A      A VG W+P+ D  + HV E+G++AV E ++  +   L FE V  GE QVV+G NYRL L     G    ++EAVV+E+ P  + + L SF+P+
Sbjct:    1 MTMRTSSLLLAAVAVVAIVAGAT--AATVGSWEPV-DINDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAGVNYRLTLEASSSGAKDGRYEAVVYEQDPRSNARKLVSFEPI 116          
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYTA_HELAN (Cysteine proteinase inhibitor A OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.147e-11
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 1
Query:  172 EIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFKPM 387
            E+ +FAV E+NK+  + L+F  V   + QVV+G  Y + L   +G   K +EA VW KPWE+FK L  FKP+
Sbjct:    6 ELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKVWVKPWENFKELQEFKPV 77          
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYT1_ARATH (Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana GN=CYS1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 4.147e-11
Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 1
Query:  100 AGDRKGALVGGWKPIE-DPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSF 378
            A  + G +VGG + I+ +  +  V  + +FAV E+NK     L+++ +   +TQVV+GT + L + V DG + K +EA V EK WE+ K L SF
Sbjct:    2 ADQQAGTIVGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVADGETNKVYEAKVLEKAWENLKQLESF 95          
BLAST of CN185032 vs. ExPASy Swiss-Prot
Match: CYT2_ORYSJ (Cysteine proteinase inhibitor 2 OS=Oryza sativa subsp. japonica GN=Os05g0494200 PE=2 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11
Identity = 37/95 (38.95%), Postives = 56/95 (58.95%), Query Frame = 1
Query:  112 KGALVGGWKPIEDPKEKHV--MEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKD-GPSTKKFEAVVWEKPWEHFKSLTSFKPM 387
            +G  VGG       +E  +  +E+ +FAV E+N ++ + L+ E V K   QVV G  + L + VK+ G + K +EA VWE+ WE+FK L  FKP+
Sbjct:   52 RGVKVGGIHDAPAGRENDLTTVELARFAVAEHNSKANAMLELERVVKVRQQVVGGFMHYLTVEVKEPGGANKLYEAKVWERAWENFKQLQDFKPL 146          
The following BLAST results are available for this feature:
BLAST of CN185032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CYT7_ORYSJ8.357e-1237.82Putative cysteine proteinase inhibitor 7 OS=Oryza ... [more]
CYTA_HELAN4.147e-1144.44Cysteine proteinase inhibitor A OS=Helianthus annu... [more]
CYT1_ARATH4.147e-1138.30Cysteine proteinase inhibitor 1 OS=Arabidopsis tha... [more]
CYT2_ORYSJ9.239e-1138.95Cysteine proteinase inhibitor 2 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006J16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006J16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185032 ID=CN185032; Name=CN185032; organism=Citrus sinensis; type=EST; length=560bp
GAGGGGACTTTGGTGTGAACGGTTACCAAAACAACGAAAATGAATCAACG
TTTTTGCTGTCTTATTGTTCTCTTTCTCTCCGTGGTCCCTCTCCTGGCCG
CCGGCGACCGTAAAGGAGCGTTGGTTGGGGGATGGAAGCCGATAGAGGAC
CCCAAGGAGAAGCACGTGATGGAGATCGGGCAGTTCGCGGTGACGGAGTA
CAACAAACAGTCAAAGAGCGCGTTGAAGTTCGAGAGCGTGGAGAAGGGCG
AGACTCAGGTGGTTTCCGGCACCAATTACCGGCTGATCTTGGTCGTCAAG
GACGGACCTTCGACCAAGAAATTTGAAGCTGTCGTTTGGGAGAAGCCATG
GGAGCATTTCAAGAGTCTCACCTCGTTTAAGCCTATGGTTAAATAGGGTG
TTTAACAAATAACAATGCATGTAATCTCAGATTGATAATTATTAAGGTTT
TCGTTATGTGAGTGATGATATTATTATATTGTTTATGAATGTCAAAGCAA
CTCTCCCGTCATTTTTTTTTTTTAATATCCAAACTTGAACCTTTTCACAA
ACCCATTTCC
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