CN185018

Overview
NameCN185018
Unique NameCN185018
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length228
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C67_ARATH (Probable protein phosphatase 2C 67 OS=Arabidopsis thaliana GN=At5g02760 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.014e-28
Identity = 59/75 (78.67%), Postives = 65/75 (86.67%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            L P D+F+I ASDGLWEHLSNQEAVDIV N P+ G ARRL+KAAL+EAAKKREMRYSDL +I  GVRRHFHDDIT
Sbjct:  264 LSPQDEFIILASDGLWEHLSNQEAVDIVHNSPRQGIARRLLKAALKEAAKKREMRYSDLTEIHPGVRRHFHDDIT 338          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C63_ARATH (Probable protein phosphatase 2C 63 OS=Arabidopsis thaliana GN=At4g33920 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.886e-27
Identity = 54/75 (72.00%), Postives = 67/75 (89.33%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            L+P D F+IFASDGLWEHLS++ AV+IV  HP++G ARRLV+AAL+EAAKKREMRY D+KKI +G+RRHFHDDI+
Sbjct:  258 LKPQDLFLIFASDGLWEHLSDETAVEIVLKHPRTGIARRLVRAALEEAAKKREMRYGDIKKIAKGIRRHFHDDIS 332          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C43_ORYSJ (Probable protein phosphatase 2C 43 OS=Oryza sativa subsp. japonica GN=Os04g0584366 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 4.906e-26
Identity = 53/75 (70.67%), Postives = 66/75 (88.00%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            L   D F IFASDGLWEHL+NQ+AV+IV N+P+ G ARRLVKAAL+EAA+KREM+Y+D+KK+++GVRR FHDDIT
Sbjct:  272 LHSQDSFFIFASDGLWEHLTNQQAVEIVHNNPREGIARRLVKAALKEAARKREMKYNDIKKLEKGVRRFFHDDIT 346          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C25_ORYSJ (Probable protein phosphatase 2C 25 OS=Oryza sativa subsp. japonica GN=Os02g0685600 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.180e-25
Identity = 53/75 (70.67%), Postives = 65/75 (86.67%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            L   DQFVIFASDGLWEHL+NQ+AVDIV  +P++G A+RLV  AL+EAA+KREMR+ DLKK+++GVRR FHDDIT
Sbjct:  271 LSLQDQFVIFASDGLWEHLTNQQAVDIVYKNPRAGIAKRLVNTALKEAARKREMRFVDLKKVEKGVRRFFHDDIT 345          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C68_ARATH (Probable protein phosphatase 2C 68 OS=Arabidopsis thaliana GN=At5g06750 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.061e-24
Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            LQ  D+FVIFASDGLWE ++NQ+AV+IV  HP+ G ARRLV+ A+  AAKKREM Y DLKK++RGVRR FHDDIT
Sbjct:  279 LQTSDKFVIFASDGLWEQMTNQQAVEIVNKHPRPGIARRLVRRAITIAAKKREMNYDDLKKVERGVRRFFHDDIT 353          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSJ (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.131e-22
Identity = 49/75 (65.33%), Postives = 63/75 (84.00%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            L+P+D F+IFASDGLWEHLS+  AV IV  +P++G A RLVKAAL+EA +KRE+ + DLK I++GVRRHFHDDI+
Sbjct:  255 LKPNDLFLIFASDGLWEHLSDDAAVQIVFKNPRTGIANRLVKAALKEATRKREVSFRDLKTIEKGVRRHFHDDIS 329          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSI (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. indica GN=BIPP2C2 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.131e-22
Identity = 49/75 (65.33%), Postives = 63/75 (84.00%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            L+P+D F+IFASDGLWEHLS+  AV IV  +P++G A RLVKAAL+EA +KRE+ + DLK I++GVRRHFHDDI+
Sbjct:  255 LKPNDLFLIFASDGLWEHLSDDAAVQIVFKNPRTGIANRLVKAALKEATRKREVSFRDLKTIEKGVRRHFHDDIS 329          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C78_ORYSJ (Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.291e-22
Identity = 49/75 (65.33%), Postives = 64/75 (85.33%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            L+  D F+IFASDGLWE L+++ AVDIV  +P++G A+RLV+AAL EAA+KREMRY+D+K I+RG RR+FHDDIT
Sbjct:  262 LRQQDLFLIFASDGLWEQLTDKAAVDIVFKNPRAGIAKRLVRAALTEAARKREMRYTDIKHIERGSRRNFHDDIT 336          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C61_ORYSJ (Probable protein phosphatase 2C 61 OS=Oryza sativa subsp. japonica GN=Os07g0114000 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.962e-20
Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = -3
Query:    2 DQFVIFASDGLWEHLSNQEAVDIV-QNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 214
            D FV+FASDGLWEHLS++ AV +V ++  + G A RLV+AAL EAA+KRE+R  DL++I+RGVRRHFHDDIT
Sbjct:  261 DLFVVFASDGLWEHLSDEAAVQLVSKSSTRRGVAARLVQAALGEAARKREVRRGDLRRIERGVRRHFHDDIT 332          
BLAST of CN185018 vs. ExPASy Swiss-Prot
Match: P2C29_ORYSJ (Probable protein phosphatase 2C 29 OS=Oryza sativa subsp. japonica GN=Os03g0207400 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.997e-19
Identity = 44/75 (58.67%), Postives = 59/75 (78.67%), Query Frame = -3
Query:    2 LQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 226
            L+P DQFVIFASDGLWE L+++ AV IV   P+ G A RLV+AA  EAA+K++++Y  ++ I++G RRHFHDDIT
Sbjct:  273 LRPGDQFVIFASDGLWEQLTDEAAVAIVAGSPRRGVAMRLVRAAQLEAARKKDVKYERIRTIEKGQRRHFHDDIT 347          
The following BLAST results are available for this feature:
BLAST of CN185018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
P2C67_ARATH4.014e-2878.67Probable protein phosphatase 2C 67 OS=Arabidopsis ... [more]
P2C63_ARATH9.886e-2772.00Probable protein phosphatase 2C 63 OS=Arabidopsis ... [more]
P2C43_ORYSJ4.906e-2670.67Probable protein phosphatase 2C 43 OS=Oryza sativa... [more]
P2C25_ORYSJ3.180e-2570.67Probable protein phosphatase 2C 25 OS=Oryza sativa... [more]
P2C68_ARATH2.061e-2469.33Probable protein phosphatase 2C 68 OS=Arabidopsis ... [more]
P2C34_ORYSJ1.131e-2265.33Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C34_ORYSI1.131e-2265.33Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C78_ORYSJ3.291e-2265.33Probable protein phosphatase 2C 78 OS=Oryza sativa... [more]
P2C61_ORYSJ8.962e-2065.28Probable protein phosphatase 2C 61 OS=Oryza sativa... [more]
P2C29_ORYSJ1.997e-1958.67Probable protein phosphatase 2C 29 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006J04_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185018 ID=CN185018; Name=CN185018; organism=Citrus sinensis; type=EST; length=228bp
CTGTGATGTCATCGTGGAAATGCCGGCGGACGCCACGGTCTATCTTCTTC
AAGTCAGAATATCTCATTTCTCTCTTTTTTGCTGCTTCTTGTAAAGCAGC
TTTCACAAGCCTCCTTGCACTTCCACTCTGTGGATGATTTTGAACTATAT
CAACTGCTTCTTGATTACTTAGGTGTTCCCAGAGCCCATCAGATGCAAAT
ATTACAAATTGATCATGTGGTTGCAGCT
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