CN185013

Overview
NameCN185013
Unique NameCN185013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8852 contig Csv1_Contig8852:118..882. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 8.308e-34
Identity = 88/207 (42.51%), Postives = 117/207 (56.52%), Query Frame = 2
Query:   89 ELKSWSFYRAGIAEFMATFLFLYITVLTVMG----VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 697
            E K   F+RA +AEF+A  LF++I++ + +G    V  + T  +      ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RAV Y++ QC+GAI    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R          APL IGF+V L HL  I  TG GINPARS G+A+I
Sbjct:    4 EFKKKIFWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSL--GLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGFSVALGHLLAIDYTGCGINPARSFGSAVI 204          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 8.308e-34
Identity = 86/205 (41.95%), Postives = 118/205 (57.56%), Query Frame = 2
Query:   89 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 697
            E+K   F+RA +AEF+A  LF++I++ + +G +    +  T+    +  + AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RAV Y++ QC+GAI    ++ G   S     L  G N +AHG   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A++
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSL--GRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL 202          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 1.286e-33
Identity = 87/207 (42.03%), Postives = 116/207 (56.04%), Query Frame = 2
Query:   89 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS---KSNTKCSTVGIQ-GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 697
            E K   F+RA +AEF+A  LF++I++ + +G     KSN     V     ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RA+ Y++ QC+GAI    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R           PL IGF+V L HL  I  TG GINPARS G+++I
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----GPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI 204          

HSP 2 Score: 22.3274 bits (46), Expect = 1.286e-33
Identity = 8/14 (57.14%), Postives = 9/14 (64.29%), Query Frame = 3
Query:  696 SSTKDHAWDDHWIF 737
            SS   H + DHWIF
Sbjct:  201 SSVITHNFQDHWIF 214          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 143.28 bits (360), Expect = 1.417e-33
Identity = 86/205 (41.95%), Postives = 116/205 (56.59%), Query Frame = 2
Query:   89 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 697
            E K   F+RA +AEF+AT LF++I++ + +G      N + +      ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RA+ Y++ QC+GAI    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A+I
Sbjct:    4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI 202          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 1.675e-33
Identity = 89/207 (43.00%), Postives = 119/207 (57.49%), Query Frame = 2
Query:   89 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS---KSNTKCSTVGIQ-GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 697
            E K   F+RA +AEF+A  LF++I++ + +G     KSN     V     ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RA+ Y++ QC+GAI    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R  RD  +    PL IGF+V L HL  I  TG GINPARS G+++I
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD-RRRRRD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI 205          

HSP 2 Score: 22.3274 bits (46), Expect = 1.675e-33
Identity = 8/14 (57.14%), Postives = 9/14 (64.29%), Query Frame = 3
Query:  696 SSTKDHAWDDHWIF 737
            SS   H + DHWIF
Sbjct:  202 SSVITHNFQDHWIF 215          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 141.739 bits (356), Expect = 4.123e-33
Identity = 85/205 (41.46%), Postives = 118/205 (57.56%), Query Frame = 2
Query:   89 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 697
            E+K   F+RA +AEF+A  LF++I++ + +G +    +  T+    +  + AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RAV Y++ QC+GAI  + ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A++
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLENSL--GRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL 202          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 8.174e-33
Identity = 85/207 (41.06%), Postives = 114/207 (55.07%), Query Frame = 2
Query:   89 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQG----IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 697
            E K   F+RA +AEF+A  LF++I++ + +G +       T G       ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RAV Y++ QC+GAI    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R           PL IG +V L HL  I  TG GINPARS G+++I
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSL--GRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----GPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVI 204          

HSP 2 Score: 21.9422 bits (45), Expect = 8.174e-33
Identity = 8/14 (57.14%), Postives = 9/14 (64.29%), Query Frame = 3
Query:  696 SSTKDHAWDDHWIF 737
            SS   H + DHWIF
Sbjct:  201 SSVITHNFKDHWIF 214          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 1.200e-32
Identity = 85/205 (41.46%), Postives = 115/205 (56.10%), Query Frame = 2
Query:   89 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 697
            E K   F+RA +AEF+A  LF++I++ + +G      N + +      ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RA+ Y++ QC+GAI    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A+I
Sbjct:    4 EFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI 202          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.859e-31
Identity = 83/212 (39.15%), Postives = 121/212 (57.08%), Query Frame = 2
Query:   89 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS-----KSNTKCSTVG----IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 697
            E K  +F+RA IAEF+A  LF++I++   +G +     K+N    TVG    I  ++ AFG  I  +      +SG H+NPAVT G LL+ ++S+ +AV Y++ QCLGA+    ++ G   +   E    G N ++ G + G GLG EI+ TF LV  V + TD +R+     V    PL IG +V L HL  I  TG G+NPARS G+A++
Sbjct:    4 EFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKAN---QTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGI--TSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSV----PLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVL 206          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 6.162e-29
Identity = 81/199 (40.70%), Postives = 115/199 (57.79%), Query Frame = 2
Query:  104 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 697
            +F++A  AEF+AT +F+ + V + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT  ++  RK+S+ ++VFY++ QCLGAI GAG++           +GG      HG  T G GL  E+I TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I
Sbjct:   33 AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI 223          
The following BLAST results are available for this feature:
BLAST of CN185013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
AQP1_PIG8.308e-3442.51Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE8.308e-3441.95Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_BOVIN1.286e-3342.03Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_HUMAN1.417e-3341.95Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP1.675e-3343.00Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_RAT4.123e-3341.46Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_CANFA8.174e-3341.06Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_PONAB1.200e-3241.46Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQPA_RANES3.859e-3139.15Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP4_MOUSE6.162e-2940.70Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006J01_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006J01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185013 ID=CN185013; Name=CN185013; organism=Citrus sinensis; type=EST; length=768bp
GTTCTCAGAGAGGCAACCCATTGGGACATCAGCTCAATCAGACAAAGACT
ACAAGGAGCCACCACCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTCA
TGGTCTTTTTACAGAGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGTT
CCTCTACATCACTGTCTTGACTGTCATGGGTGTCTCTAAGTCTAACACCA
AGTGCTCCACTGTCGGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCATG
ATCTTTGCCCTTGTTTACTGCACTGCTGGTATCTCAGGAGGACACATCAA
CCCAGCAGTGACCTTCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACAA
GAGCTGTCTTCTACATGGTCATGCAGTGCCTTGGTGCCATCTGTGGTGCT
GGTGTTGTCAAGGGATTCGAAGGTTCAAAGAACTACGAGAGGTTGGGTGG
TGGAGCCAATGTTGTTGCTCACGGCTACACCAAGGGTGATGGTCTTGGTG
CTGAGATTATTGGAACCTTTGTTCTTGTTTACACTGTCTTCTCTGCCACT
GATGCCAAGAGAAACGCCAGAGATTCTCATGTCCCTATTTTGGCCCCCCT
CCCCATTGGATTTGCTGTTTTCTTGGTCCACCTGGCCACCATCCCCATCA
CAGGAACTGGCATCAACCCAGCTAGGAGTCTTGGAGCTGCCATCATCTTC
AACAAAAGACCATGCCTGGGATGACCATTGGATCTTTCTGGGTTGAACCA
TTCATTTGGAGCTGCACT
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