CN185013

Overview
NameCN185013
Unique NameCN185013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8852 contig Csv1_Contig8852:118..882. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.625e-21
Identity = 62/166 (37.35%), Postives = 87/166 (52.41%), Query Frame = 2
Query:  212 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 694
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y V Q LGAI  A ++      K+    GG A+     +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVAL 193          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.123e-21
Identity = 73/203 (35.96%), Postives = 102/203 (50.25%), Query Frame = 2
Query:   89 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 697
            EL+S SF+RA  AEF AT  +++      +G S        + +  +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA  YM  Q LGA+ GA V+  +  +    R     N +  G +       EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 194          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.772e-21
Identity = 67/200 (33.50%), Postives = 96/200 (48.00%), Query Frame = 2
Query:  116 AGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVG-------IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 694
            A + EF  TF+FL+   + +  V+  +   +T         +  IA  FG  +   ++C AG+SGG +NPAV+  L LAR +S  R V     Q +  +   G        K         N +  G ++  GL  E+ GT VL  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGAA+
Sbjct:   50 AAVGEFCGTFMFLWCAYV-ICNVANHDVALTTEPEGSHPGQLIMIALGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAISPARCVVMWFPQIIAGMAAGGAASAMTPGKVLF-----TNALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAV 238          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.729e-21
Identity = 72/197 (36.55%), Postives = 103/197 (52.28%), Query Frame = 2
Query:  113 RAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSAT-DAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 697
            RA I+EF+AT +F++    +V+ + K     ST G +  +A A    +   V     ISGGH+NPAVTFG L+  ++SL RAV Y V Q LGA+    +++   G     R  G A  +A G      +  E + TF L+Y  ++   D KR     HV  +APL +GF +    LA  P  G G+NPAR  G A++
Sbjct:   26 RAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGM---RPPGFA--LASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV 213          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.176e-21
Identity = 73/206 (35.44%), Postives = 109/206 (52.91%), Query Frame = 2
Query:   86 GELKSWSFYRAGIAEFMATFLFLYITVLTVM--GVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 694
            G+  S +  +A +AEF+AT LF++  V + +  G   +       G+  IA A    +F  V   A  SGGH+NPAVTFGL +   +++   +FY V Q LGA     +++     K     G     V+ G T+ +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A+
Sbjct:   10 GDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHG-----VSGGTTELEGVVFEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 206          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.176e-21
Identity = 72/206 (34.95%), Postives = 108/206 (52.43%), Query Frame = 2
Query:   86 GELKSWSFYRAGIAEFMATFLFLYITVLTVM--GVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 694
            G+  S +  +A +AEF+AT LF++  V + +  G   +       G+  IA A    +F  V   A ISGGH+NPAVTFGL +   +++   +FY + Q LGA     ++K     K     G        G ++ +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A+
Sbjct:   10 GDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHG------VAGISELEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 205          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.176e-21
Identity = 75/209 (35.89%), Postives = 112/209 (53.59%), Query Frame = 2
Query:   86 GELKSWSFYRAGIAEFMATFLFLYITVLTVM--GVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAH---GYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 694
            G+  S +  +A +AEF+AT LF++  V + +  G   +       G+  IA A    +F  V   A ISGGH+NPAVTFGL +   +++   VFY V Q LGA   A ++ GF        +  G  +  H   G ++ +G+  E++ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A+
Sbjct:   10 GDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATV-ACLLLGF--------VTHGKAIPTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 205          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.176e-21
Identity = 68/202 (33.66%), Postives = 110/202 (54.46%), Query Frame = 2
Query:  113 RAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLG----AEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 697
            +AG+AEF++TF+F++    + +  +K  ++   +  G+   + A    +F  V   A ISGGH+NPAVTFG  +   ++L R + Y++ Q LG+I  + ++     S          +V A G ++G G+G     EI+ TF LVYTV+ +A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTAS----------SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV 208          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 6.176e-21
Identity = 68/202 (33.66%), Postives = 97/202 (48.02%), Query Frame = 2
Query:  116 AGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQG---------IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 694
            A + EF  TF+FL+   +     + +N   + V             IA  FG  +   ++C AG+SGG +NPAV+  L LAR +S TR V   V Q +  +   G        +        AN +  G ++  GL  E+ GT +L  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGAA+
Sbjct:   51 AAVGEFCGTFMFLWCAYVIC---NVANHDVALVAAPDGSHPGQLIMIAIGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAVSPTRCVVMWVSQIVAGMAAGGAASAMTPGEVL-----FANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAV 239          
BLAST of CN185013 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.066e-21
Identity = 61/166 (36.75%), Postives = 86/166 (51.81%), Query Frame = 2
Query:  212 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 694
            +G  G+A AFG  +  + Y   GISGGH NPAV+  L +A +L     + Y V Q LGAI  A ++      K+    GG A+     +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLSLTVAGRLPAKDLIPYWVAQVLGAIATAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVAL 193          
The following BLAST results are available for this feature:
BLAST of CN185013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
AQPZ_BRUME1.625e-2137.35Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
MIP_CAVPO2.123e-2135.96Lens fiber major intrinsic protein OS=Cavia porcel... [more]
AQY2_YEAST2.772e-2133.50Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
TIP31_MAIZE4.729e-2136.55Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIP22_MAIZE6.176e-2135.44Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP21_ORYSJ6.176e-2134.95Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP21_MAIZE6.176e-2135.89Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP1_MEDTR6.176e-2133.66Probable aquaporin TIP-type OS=Medicago truncatula... [more]
AQY1_YEAST6.176e-2133.66Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
AQPZ_BRUSU8.066e-2136.75Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006J01_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006J01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185013 ID=CN185013; Name=CN185013; organism=Citrus sinensis; type=EST; length=768bp
GTTCTCAGAGAGGCAACCCATTGGGACATCAGCTCAATCAGACAAAGACT
ACAAGGAGCCACCACCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTCA
TGGTCTTTTTACAGAGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGTT
CCTCTACATCACTGTCTTGACTGTCATGGGTGTCTCTAAGTCTAACACCA
AGTGCTCCACTGTCGGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCATG
ATCTTTGCCCTTGTTTACTGCACTGCTGGTATCTCAGGAGGACACATCAA
CCCAGCAGTGACCTTCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACAA
GAGCTGTCTTCTACATGGTCATGCAGTGCCTTGGTGCCATCTGTGGTGCT
GGTGTTGTCAAGGGATTCGAAGGTTCAAAGAACTACGAGAGGTTGGGTGG
TGGAGCCAATGTTGTTGCTCACGGCTACACCAAGGGTGATGGTCTTGGTG
CTGAGATTATTGGAACCTTTGTTCTTGTTTACACTGTCTTCTCTGCCACT
GATGCCAAGAGAAACGCCAGAGATTCTCATGTCCCTATTTTGGCCCCCCT
CCCCATTGGATTTGCTGTTTTCTTGGTCCACCTGGCCACCATCCCCATCA
CAGGAACTGGCATCAACCCAGCTAGGAGTCTTGGAGCTGCCATCATCTTC
AACAAAAGACCATGCCTGGGATGACCATTGGATCTTTCTGGGTTGAACCA
TTCATTTGGAGCTGCACT
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