CN185012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185012 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 4.448e-19 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = -2 Query: 209 ITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 376 ITGTGINPARS+GAA+I+N+ AWDDHWIFW GPFIGA AA YHQ ++RA K+ Sbjct: 217 ITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKA 272
BLAST of CN185012 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.448e-19 Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = -2 Query: 209 ITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 376 ITGTGINPARS+GAA+IFN + AW +HWIFWVGPF+GAA+AA YHQ ++RA K+ Sbjct: 227 ITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKA 282
BLAST of CN185012 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.809e-19 Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = -2 Query: 209 ITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 376 ITGTGINPARS GAA+I+N AWDD WIFWVGPF+GAA+AA YHQ V+RA K+ Sbjct: 221 ITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKA 276
BLAST of CN185012 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.587e-19 Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = -2 Query: 209 ITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 376 +TGTGINPARS G A+IFN D AWDD WI+WVGPF+GAA+AA+YHQ ++R K+ Sbjct: 224 VTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQYILRGSAIKA 279
BLAST of CN185012 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.587e-19 Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = -2 Query: 224 ITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRA 376 ITGTGINPARSLGAA+I+N+ AW DHWIFWVGP IGAA+AA YHQ V+RA Sbjct: 227 ITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRA 277
BLAST of CN185012 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.908e-19 Identity = 37/51 (72.55%), Postives = 46/51 (90.20%), Query Frame = -2 Query: 224 ITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRA 376 ITGTGINPARSLG A+++N + AW D WIFWVGPFIGAA+AA+YHQ+++RA Sbjct: 224 ITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQVILRA 274
BLAST of CN185012 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.690e-18 Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = -2 Query: 209 ITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 376 ITGTGINPARS GAA+I+N + AWDD WIFWVGP IGAA AA YHQ ++RA K+ Sbjct: 222 ITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKA 277
BLAST of CN185012 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.883e-18 Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = -2 Query: 209 ITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 376 ITGTGINPARS GAA+I+N + AWDD WIFWVGPF+GA AA YHQ ++RA K+ Sbjct: 215 ITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYILRASAIKA 270
BLAST of CN185012 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 2.440e-17 Identity = 37/50 (74.00%), Postives = 44/50 (88.00%), Query Frame = -2 Query: 227 ITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIR 376 ITGTGINPARSLGAA+++N+ AW DHWIFWVGP IGA LAA YH++V+R Sbjct: 224 ITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLR 273
BLAST of CN185012 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.266e-12 Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = -2 Query: 203 ITGTGINPARSLGAAIIFN--KDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 376 ITGTGINPARSLG A++ AW WIFWVGPF GAA A +YH ++R K+ A Sbjct: 212 ITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAKAFA 271 The following BLAST results are available for this feature:
BLAST of CN185012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185012 ID=CN185012; Name=CN185012; organism=Citrus sinensis; type=EST; length=377bpback to top |