CN185005 | Citrus Genome Database

Overview


Name	CN185005
Unique Name	CN185005
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	758

Libraries


Library Name	Type
Ruby Orange Developing Flower cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
CN185005_ssr236	microsatellite	CN185005_ssr236:236..247.	BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13759	contig	Csv1_Contig13759:424..1180.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: GBLP_NEUCR (Guanine nucleotide-binding protein subunit beta-like protein OS=Neurospora crassa GN=cpc-2 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.695e-64
Identity = 94/167 (56.29%), Postives = 110/167 (65.87%), Query Frame = -1

Query:  135 APNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 635
            +PN   P IVS+ WD+ VKVW LS+CKL+    GHTGY+N V +SPDGSLCASGGKDG  +LWDL E K LYSL+A   IHAL FSPNRYWLCAAT  SI I+DLE KS V++LK +                       C SL WS DG TLF+GYTD +IR WG+
Sbjct:  157 SPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINAVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDEIHALVFSPNRYWLCAATSSSIIIFDLEKKSKVDELKPEFQNIGKKSREPE-----------CVSLAWSADGQTLFAGYTDNIIRAWGV 312

HSP 2 Score: 72.0182 bits (175), Expect = 2.695e-64
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = -3

Query:  631 RQIVSASRDCTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP 756
            RQIVS SRD TIKLWNTLG+CK+TI E   HTEWVSCVRFSP
Sbjct:  118 RQIVSGSRDRTIKLWNTLGDCKFTITE-KGHTEWVSCVRFSP 158

[Close]

BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: GBLP_CAEEL (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Caenorhabditis elegans GN=rack-1 PE=1 SV=3)

HSP 1 Score: 195.282 bits (495), Expect = 1.107e-62
Identity = 94/167 (56.29%), Postives = 112/167 (67.07%), Query Frame = -1

Query:  135 APNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 635
            +P+   P IVSA WD+ VKVWNL NC+L+    GHTGYVNTV VSPDGSLCASGGKDG  +LWDL EGK LY+L    VI+A+ FSPNRYWLCAA   SIKIWDLE K  +E+LK ++                   +  C SL WS DG TLF+GYTD +IRV+ +
Sbjct:  163 SPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELKPEI----------ASSGSSRGSSPQCISLAWSQDGQTLFAGYTDNIIRVYQV 319

HSP 2 Score: 66.6254 bits (161), Expect = 1.107e-62
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = -3

Query:  625 RQIVSASRDCTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPQH 756
            RQIVS SRD +IKLWNTL +CKYTI + D HT+WVS VRFSP +
Sbjct:  124 RQIVSGSRDKSIKLWNTLAQCKYTITD-DCHTDWVSTVRFSPSN 166

[Close]

BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: GBLP_SCHPO (Guanine nucleotide-binding protein subunit beta-like protein OS=Schizosaccharomyces pombe GN=rkp1 PE=1 SV=3)

HSP 1 Score: 178.333 bits (451), Expect = 7.650e-58
Identity = 89/167 (53.29%), Postives = 109/167 (65.27%), Query Frame = -1

Query:  135 APNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 635
            +PN    T VSA WD+ VKVW+L    LR +  GHTGYV+ V +SPDGSLCASGG+DG ++LWDL E   LYSL+A A I+AL FSPNRYWLCAAT  SI+I+DLE++  V++L VD                       C SL WS DG TLFSG+TD +IRVW +
Sbjct:  157 SPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALVFSPNRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPE-----------CISLTWSPDGQTLFSGWTDNLIRVWQV 312

HSP 2 Score: 67.3958 bits (163), Expect = 7.650e-58
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = -3

Query:  631 RQIVSASRDCTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP 756
            RQ+VS SRD TIK+WN +G CKYTI +G  H++WVSCVRFSP
Sbjct:  118 RQVVSGSRDKTIKIWNIIGNCKYTITDG-GHSDWVSCVRFSP 158

HSP 3 Score: 72.0182 bits (175), Expect = 2.534e-12
Identity = 45/163 (27.61%), Postives = 75/163 (46.01%), Query Frame = -1

Query:  135 VSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC--FSP---NRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 608
            +SASWD+T+++W+L   +      GHT  V +V++SPD     SG +D  I +W++    +    D G      C  FSP   N  ++ A  ++++K+WDLE+ S+                             Y +++  S DGS   SG  DG + +W +
Sbjct:   79 LSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSL--------------------RTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDL 221

HSP 4 Score: 20.7866 bits (42), Expect = 2.534e-12
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = -3

Query:  709 IVSASRDCTIKLWN 750
            ++S SRD +I LWN
Sbjct:   31 LLSGSRDKSIILWN 44

[Close]

BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: GBLP_DICDI (Guanine nucleotide-binding protein subunit beta-like protein OS=Dictyostelium discoideum GN=gpbB PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 1.180e-55
Identity = 82/165 (49.70%), Postives = 105/165 (63.64%), Query Frame = -1

Query:  141 APNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 635
            +PNT  PTIVS SWD  VK+W++ + K   TL  HTGYVNTV +SPDGSLCASGGKD    LW+L+ GK LY L+A   I+AL FSPN+YWL AAT+  I IWDL +K ++ ++  ++                      C SL WS DGS L++GY DG+IRV+
Sbjct:  165 SPNT--PTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFSPNKYWLSAATDDKIIIWDLLTKQVLAEIVPEVKEQAFDSKKKKESKPKAPA---CLSLAWSADGSVLYAGYNDGLIRVY 324

HSP 2 Score: 73.1738 bits (178), Expect = 1.180e-55
Identity = 29/42 (69.05%), Postives = 37/42 (88.10%), Query Frame = -3

Query:  631 RQIVSASRDCTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP 756
            RQI+S SRD TIK+WNTLGECK+T++  +AH +WVSC+RFSP
Sbjct:  125 RQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSP 166

[Close]

BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: GBLP_TRYBR (Guanine nucleotide-binding protein subunit beta-like protein OS=Trypanosoma brucei rhodesiense PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 2.845e-54
Identity = 85/167 (50.90%), Postives = 107/167 (64.07%), Query Frame = -1

Query:  135 APNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 635
            +P+   P IVS  WD  VKVW+L+  +L   L GHT YV +V VSPDGSLCAS  KDGV  LWDL +G+ L  + AGA I+ +CFSPNRYW+CAATE+ I+I+DLE+K I+ +L  +                       C S+ WS DGSTL+SGYTD VIRVWG+
Sbjct:  161 SPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAGAPINQICFSPNRYWMCAATEKGIRIFDLENKDIIVELAPEHQGSKKIVPE-------------CVSIAWSADGSTLYSGYTDNVIRVWGV 314

HSP 2 Score: 60.4622 bits (145), Expect = 2.845e-54
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = -3

Query:  631 RQIVSASRDCTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP 756
            RQIVS  RD  +++WN  GEC +T+  G AHT+WVSCVRFSP
Sbjct:  122 RQIVSGGRDNALRVWNVKGECMHTLSRG-AHTDWVSCVRFSP 162

HSP 3 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 52/164 (31.71%), Postives = 81/164 (49.39%), Query Frame = -1

Query:  135 VSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGA---VIHALCFSPN---RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 608
            VSASWD ++++WNL N + +    GHT  V +VA SPD     SGG+D  + +W++ +G+ +++L  GA    +  + FSP+      +    +  +K+WDL +  +V DLK                        Y TS+  S DGS   S   DGV R+W +
Sbjct:   83 VSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRDNALRVWNV-KGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLK--------------------GHTNYVTSVTVSPDGSLCASSDKDGVARLWDL 225

[Close]

BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: GBLP_TRYBB (Guanine nucleotide-binding protein subunit beta-like protein OS=Trypanosoma brucei brucei PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 2.845e-54
Identity = 85/167 (50.90%), Postives = 107/167 (64.07%), Query Frame = -1

Query:  135 APNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 635
            +P+   P IVS  WD  VKVW+L+  +L   L GHT YV +V VSPDGSLCAS  KDGV  LWDL +G+ L  + AGA I+ +CFSPNRYW+CAATE+ I+I+DLE+K I+ +L  +                       C S+ WS DGSTL+SGYTD VIRVWG+
Sbjct:  161 SPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAGAPINQICFSPNRYWMCAATEKGIRIFDLENKDIIVELAPEHQGSKKIVPE-------------CVSIAWSADGSTLYSGYTDNVIRVWGV 314

HSP 2 Score: 60.4622 bits (145), Expect = 2.845e-54
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = -3

Query:  631 RQIVSASRDCTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP 756
            RQIVS  RD  +++WN  GEC +T+  G AHT+WVSCVRFSP
Sbjct:  122 RQIVSGGRDNALRVWNVKGECMHTLSRG-AHTDWVSCVRFSP 162

HSP 3 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 52/164 (31.71%), Postives = 81/164 (49.39%), Query Frame = -1

Query:  135 VSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGA---VIHALCFSPN---RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 608
            VSASWD ++++WNL N + +    GHT  V +VA SPD     SGG+D  + +W++ +G+ +++L  GA    +  + FSP+      +    +  +K+WDL +  +V DLK                        Y TS+  S DGS   S   DGV R+W +
Sbjct:   83 VSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRDNALRVWNV-KGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLK--------------------GHTNYVTSVTVSPDGSLCASSDKDGVARLWDL 225

[Close]

BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: GBLP_LEIIN (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania infantum PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.309e-49
Identity = 79/167 (47.31%), Postives = 111/167 (66.47%), Query Frame = -1

Query:  135 APNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 635
            +P+   P +VS SWD T+KVWN++  K   TL GH+ YV+TV VSPDGSLCASGGKDG  LLWDL+ G++L+ ++  + I+ + FSPNR+W+C ATE+S+ ++DLESK+++ +L  D                   K   C S+ WS DG+TL+SG+ D +IRVW I
Sbjct:  159 SPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINVESPINQIAFSPNRFWMCVATERSLSVYDLESKAVIAELTPD-----------------GAKPSECISIAWSADGNTLYSGHKDNLIRVWSI 308

HSP 2 Score: 45.4394 bits (106), Expect = 4.309e-49
Identity = 21/42 (50.00%), Postives = 26/42 (61.90%), Query Frame = -3

Query:  631 RQIVSASRDCTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP 756
            R IVSA RD  I++WN  GEC +     D H +WVS + FSP
Sbjct:  120 RLIVSAGRDNVIRVWNVAGECMHEFLR-DGHEDWVSSICFSP 160

[Close]

BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: GBLP_LEICH (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania chagasi PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.309e-49
Identity = 79/167 (47.31%), Postives = 111/167 (66.47%), Query Frame = -1

Query:  135 APNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 635
            +P+   P +VS SWD T+KVWN++  K   TL GH+ YV+TV VSPDGSLCASGGKDG  LLWDL+ G++L+ ++  + I+ + FSPNR+W+C ATE+S+ ++DLESK+++ +L  D                   K   C S+ WS DG+TL+SG+ D +IRVW I
Sbjct:  159 SPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINVESPINQIAFSPNRFWMCVATERSLSVYDLESKAVIAELTPD-----------------GAKPSECISIAWSADGNTLYSGHKDNLIRVWSI 308

HSP 2 Score: 45.4394 bits (106), Expect = 4.309e-49
Identity = 21/42 (50.00%), Postives = 26/42 (61.90%), Query Frame = -3

Query:  631 RQIVSASRDCTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP 756
            R IVSA RD  I++WN  GEC +     D H +WVS + FSP
Sbjct:  120 RLIVSAGRDNVIRVWNVAGECMHEFLR-DGHEDWVSSICFSP 160

[Close]

BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: GBLP_LEIMA (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania major PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 9.542e-49
Identity = 79/167 (47.31%), Postives = 111/167 (66.47%), Query Frame = -1

Query:  135 APNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 635
            +P+   P +VS SWD T+KVWN++  K   TL GH+ YV+TV VSPDGSLCASGGKDG  LLWDL+ G++L+ ++  + I+ + FSPNR+W+C ATE+S+ ++DLESK+++ +L  D                   K   C S+ WS DG+TL+SG+ D +IRVW I
Sbjct:  159 SPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINVESPINQIGFSPNRFWMCVATERSLSVYDLESKAVIAELTPD-----------------GAKPSECISIAWSADGNTLYSGHKDNLIRVWSI 308

HSP 2 Score: 45.4394 bits (106), Expect = 9.542e-49
Identity = 21/42 (50.00%), Postives = 26/42 (61.90%), Query Frame = -3

Query:  631 RQIVSASRDCTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP 756
            R IVSA RD  I++WN  GEC +     D H +WVS + FSP
Sbjct:  120 RLIVSAGRDNVIRVWNVAGECMHEFLR-DGHEDWVSSICFSP 160

[Close]

BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: GBLP_YEAST (Guanine nucleotide-binding protein subunit beta-like protein OS=Saccharomyces cerevisiae GN=ASC1 PE=1 SV=4)

HSP 1 Score: 143.28 bits (360), Expect = 7.388e-39
Identity = 71/160 (44.38%), Postives = 96/160 (60.00%), Query Frame = -1

Query:  135 TIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 614
            TI+SA  D+ VK WNL+  ++ A   GH   +NT+  SPDG+L AS GKDG I+LW+LA  K +Y+L A   + +L FSPNRYWL AAT   IK++ L+ + +V+DL+ +                      +  SL WS DG TLF+GYTD VIRVW +
Sbjct:  168 TIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEP------------HAVSLAWSADGQTLFAGYTDNVIRVWQV 315

HSP 2 Score: 38.891 bits (89), Expect = 7.388e-39
Identity = 19/40 (47.50%), Postives = 24/40 (60.00%), Query Frame = -3

Query:  631 IVSASRDCTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP 750
            I+S SRD TIK+W   G+C  T+     H +WVS VR  P
Sbjct:  122 IISGSRDKTIKVWTIKGQCLATLL---GHNDWVSQVRVVP 158

The following BLAST results are available for this feature:

BLAST of CN185005 vs. ExPASy Swiss-Prot

BLAST of CN185005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61


Match Name	E-value	Identity	Description
GBLP_NEUCR	2.695e-64	56.29	Guanine nucleotide-binding protein subunit beta-li...	[more]
GBLP_CAEEL	1.107e-62	56.29	Guanine nucleotide-binding protein subunit beta-2-...	[more]
GBLP_SCHPO	7.650e-58	53.29	Guanine nucleotide-binding protein subunit beta-li...	[more]
GBLP_DICDI	1.180e-55	49.70	Guanine nucleotide-binding protein subunit beta-li...	[more]
GBLP_TRYBR	2.845e-54	50.90	Guanine nucleotide-binding protein subunit beta-li...	[more]
GBLP_TRYBB	2.845e-54	50.90	Guanine nucleotide-binding protein subunit beta-li...	[more]
GBLP_LEIIN	4.309e-49	47.31	Guanine nucleotide-binding protein subunit beta-li...	[more]
GBLP_LEICH	4.309e-49	47.31	Guanine nucleotide-binding protein subunit beta-li...	[more]
GBLP_LEIMA	9.542e-49	47.31	Guanine nucleotide-binding protein subunit beta-li...	[more]
GBLP_YEAST	7.388e-39	44.38	Guanine nucleotide-binding protein subunit beta-li...	[more]

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Properties


Property Name	Value
Genbank description	UCRCS04_0006I20_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006I20, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN185005 ID=CN185005; Name=CN185005; organism=Citrus sinensis; type=EST; length=758bp
GAGGCCTTAAAAACATTTTGAACAAAATCTTAAATCTTAAATAGGTCTGA
AACTGCCTACAAAGTCGAGAAACTAGTTTGTAATCGAAAAAGAACAGCAG
TTTGCAATTACTCAAGCAGTTTTCAATAACGGCCAATACCCCAGACTCTG
ATCACACCATCTGTATAACCACTGAACAAGGTGCTTCCATCAACACTCCA
GTTCAAGCTTGTGCAGTAAATGTTCTTCTTTTTTATGGTGGTGGTGGCGG
TGGTGGCCTCAGATTTCTCGGCCTCGGTCTTAAGATCAACCTTAAGATCC
TCGACAATGCTCTTGCTCTCCAAATCCCAGATCTTTATACTCTGCTCAGT
CGCCGCACACAACCAATACCTATTAGGACTGAAGCAGAGCGCGTGAATGA
CAGCACCAGCGTCGAGCGAGTAGAGTCTTTTTCCCTCAGCCAAATCCCAC
AACAGAATCACACCATCTTTCCCTCCACTGGCACACAACGAACCATCCGG
CGACACTGCGACGGTGTTCACGTATCCAGTGTGCCCGGCAAGAGTAGCCC
TAAGCTTGCAGTTGCTCAAATTCCACACTTTGACCGTACGGTCCCACGAG
GCGGAAACGATAGTGGGCTGAAGCGTGTTGGGGGCTGAACCTAACACAAG
AAACCCACTCAGTGTGAGCGTCTCCCTCTTGAATCGTGTACTTGCACTCG
CCGAGCGTGTTCCACAACTTGATCGTACAGTCACGAGAGGCCGATACAAT
CTGACGGT