CN185005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: TG125_CAEBR (WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae GN=tag-125 PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.842e-14 Identity = 48/169 (28.40%), Postives = 79/169 (46.75%), Query Frame = -1 Query: 135 NTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGST-LFSGYTDGVIRVWGI 629 N +VS S+D +V++W++ TL H+ V+ V+ + DGSL SG DG++ +WD A G+ + +L D + + FSPN +Y L + + ++K+WD ++ + N YC N+SV G + SG D I VW + Sbjct: 172 NPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQ------------------GHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNL 322 HSP 2 Score: 26.5646 bits (57), Expect = 3.842e-14 Identity = 15/43 (34.88%), Postives = 23/43 (53.49%), Query Frame = -3 Query: 628 RQIVSASRDCTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPQ 756 + IV+AS D T+K++ +G HT +V C F+PQ Sbjct: 134 KSIVTASDDKTLKIYEVPTVKMAKTLKG--HTNYVFCCNFNPQ 174
BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: TG125_CAEEL (WD repeat-containing protein tag-125 OS=Caenorhabditis elegans GN=tag-125 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 47/169 (27.81%), Postives = 79/169 (46.75%), Query Frame = -1 Query: 135 NTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGST-LFSGYTDGVIRVWGI 629 N +VS S+D +V++W++ TL H+ V+ V+ + DGSL ASG DG++ +WD A G+ + +L D + + FSPN +Y L + + ++K+WD ++ + YC N+SV G + SG D I +W + Sbjct: 180 NPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQ------------------YTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: NLE1_MOUSE (Notchless protein homolog 1 OS=Mus musculus GN=Nle1 PE=2 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 3.247e-12 Identity = 50/173 (28.90%), Postives = 78/173 (45.09%), Query Frame = -1 Query: 141 LVLGSAPNTLQPTIVSASWDRTVKVWN-LSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 650 LV G P L VS S D T+ +W+ + K A + GH +N V SPD + AS D I LWD GK L SL AV + +R + +++ ++K+WD++++ + DL +Y +++WS DG + SG D +R+W Sbjct: 335 LVRGQGPERL----VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDL------------------PGHADEVY--AVDWSPDGQRVASGGKDKCLRIW 483 HSP 2 Score: 25.409 bits (54), Expect = 3.247e-12 Identity = 16/44 (36.36%), Postives = 23/44 (52.27%), Query Frame = -3 Query: 622 IVSASRDCTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPQHA 750 + SAS+D TIK+W G T+Q H WV+ + S +A Sbjct: 260 LYSASQDRTIKVWRAHDGVLCRTLQ---GHGHWVNTMALSTDYA 300
BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: YIDC_SCHPO (Uncharacterized WD repeat-containing protein C227.12 OS=Schizosaccharomyces pombe GN=SPAC227.12 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.927e-12 Identity = 39/108 (36.11%), Postives = 62/108 (57.41%), Query Frame = -1 Query: 294 IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG-AVIHALCFSPNRYWLC-AATEQSIKIWDLESKSIVEDL 611 +VSAS+D T ++W++ GH+ + ++A PDGSL +SGG D + +WDL GK + LD I A+ +SPN Y L ++ + ++KIWDL S+ + Sbjct: 280 LVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTI 387
BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: NLE1_HUMAN (Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=3) HSP 1 Score: 66.6254 bits (161), Expect = 4.216e-12 Identity = 50/173 (28.90%), Postives = 78/173 (45.09%), Query Frame = -1 Query: 141 LVLGSAPNTLQPTIVSASWDRTVKVWNLSNCKLRAT-LAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 650 LV G P L VS S D T+ +W+ + K T + GH +N V SPD + AS D I LWD GK L SL AV + +R + +++ ++K+WD++++ + DL +Y +++WS DG + SG D +R+W Sbjct: 335 LVRGQGPERL----VSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDL------------------PGHADEVY--AVDWSPDGQRVASGGKDKCLRIW 483 HSP 2 Score: 25.409 bits (54), Expect = 4.216e-12 Identity = 16/44 (36.36%), Postives = 23/44 (52.27%), Query Frame = -3 Query: 622 IVSASRDCTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPQHA 750 + SAS+D TIK+W G T+Q H WV+ + S +A Sbjct: 260 LYSASQDRTIKVWRAHDGVLCRTLQ---GHGHWVNTMALSTDYA 300
BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: NLE1_BOVIN (Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 5.474e-12 Identity = 50/173 (28.90%), Postives = 78/173 (45.09%), Query Frame = -1 Query: 141 LVLGSAPNTLQPTIVSASWDRTVKVWN-LSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 650 LV G P L VS S D T+ +W+ + K A + GH +N V SPD + AS D I LWD GK L SL AV + +R + +++ ++K+WD++++ + DL +Y +++WS DG + SG D +R+W Sbjct: 335 LVRGQGPERL----VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDL------------------PGHADEVY--AVDWSPDGQRVASGGKDKCLRIW 483 HSP 2 Score: 25.409 bits (54), Expect = 5.474e-12 Identity = 16/44 (36.36%), Postives = 23/44 (52.27%), Query Frame = -3 Query: 622 IVSASRDCTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPQHA 750 + SAS+D TIK+W G T+Q H WV+ + S +A Sbjct: 260 LYSASQDRTIKVWRAHDGVLCRTLQ---GHGHWVNTMALSTDYA 300
BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: WD51B_HUMAN (WD repeat-containing protein 51B OS=Homo sapiens GN=WDR51B PE=1 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 7.109e-12 Identity = 34/110 (30.91%), Postives = 61/110 (55.45%), Query Frame = -1 Query: 291 IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL--YSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLK 611 IVS S D+T+K+W+ +N + + G+ N V +P G+ AS G D + +WD+ K L Y + +G V + + F P+ Y + A+++ ++KI DL ++ L+ Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV-NCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 267 HSP 2 Score: 31.187 bits (69), Expect = 7.109e-12 Identity = 15/41 (36.59%), Postives = 24/41 (58.54%), Query Frame = -3 Query: 631 IVSASRDCTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSP 750 + +AS D +IK+W+ + Y++ HT WV C +FSP Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYR---HTHWVRCAKFSP 154
BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: NLE1_PONAB (Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3) HSP 1 Score: 65.4698 bits (158), Expect = 9.227e-12 Identity = 49/173 (28.32%), Postives = 78/173 (45.09%), Query Frame = -1 Query: 141 LVLGSAPNTLQPTIVSASWDRTVKVWNLSNCKLRAT-LAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 650 L+ G P L VS S D T+ +W+ + K T + GH +N V SPD + AS D I LWD GK L SL AV + +R + +++ ++K+WD++++ + DL +Y +++WS DG + SG D +R+W Sbjct: 335 LMRGQGPERL----VSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDL------------------PGHADEVY--AVDWSPDGQRVASGGKDKCLRIW 483 HSP 2 Score: 25.409 bits (54), Expect = 9.227e-12 Identity = 16/44 (36.36%), Postives = 23/44 (52.27%), Query Frame = -3 Query: 622 IVSASRDCTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPQHA 750 + SAS+D TIK+W G T+Q H WV+ + S +A Sbjct: 260 LYSASQDRTIKVWRAHDGVLCRTLQ---GHGHWVNTMALSTDYA 300
BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: WD51B_PONAB (WD repeat-containing protein 51B OS=Pongo abelii GN=WDR51B PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 9.246e-12 Identity = 34/110 (30.91%), Postives = 61/110 (55.45%), Query Frame = -1 Query: 291 IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL--YSLDAGAVIHALCFSP-NRYWLCAATEQSIKIWDLESKSIVEDLK 611 IVS S D+T+K+W+ +N + + G+ N V +P G+ AS G D + +WD+ K L Y + +G V + + F P + Y + A+++ ++KI DL ++ L+ Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV-NCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQ 267 HSP 2 Score: 31.187 bits (69), Expect = 9.246e-12 Identity = 15/41 (36.59%), Postives = 24/41 (58.54%), Query Frame = -3 Query: 631 IVSASRDCTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSP 750 + +AS D +IK+W+ + Y++ HT WV C +FSP Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYR---HTHWVRCAKFSP 154
BLAST of CN185005 vs. ExPASy Swiss-Prot
Match: TAF5L_HUMAN (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.949e-11 Identity = 49/160 (30.63%), Postives = 74/160 (46.25%), Query Frame = -1 Query: 135 SASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 605 S S DRT ++W+ AGH V+ V P+ + A+G D + LW +G RL++ G V+ +L FSPN +Y A +Q +K+WDL S ++ ++L+ NI TSL +S D + S D +RVW I Sbjct: 401 SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVL-SLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR------------------GHTDNI--TSLTFSPDSGLIASASMDNSVRVWDI 539 The following BLAST results are available for this feature:
BLAST of CN185005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185005 ID=CN185005; Name=CN185005; organism=Citrus sinensis; type=EST; length=758bpback to top |