CN185001
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185001 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.262e-70 Identity = 124/226 (54.87%), Postives = 162/226 (71.68%), Query Frame = 2 Query: 155 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC--GYVGDDAVRKRIGFFTTFCGKF 826 +G II+R MFE +L +R D C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF QT HETTGGW AP G +AWGYC + +++P+ YYGRGPIQLT NY G+ALG+DL+NNPDL+++DPV++F++AIWFWMTAQ PKPSCH+VI ++W PS +D ++GRLPGYG+ TNIINGG EC GY D+A + R+G++ +C F Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDPP-------------YYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNA-KDRVGYYKRYCDMF 237
BLAST of CN185001 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.153e-70 Identity = 126/230 (54.78%), Postives = 159/230 (69.13%), Query Frame = 2 Query: 137 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGDDAVRKRIGFFTTFCG 820 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HET GG G + GYC++RQ+ + +YYGRGPIQLT NY R G+ +GV DL+NNPDL+ATDP++SF++AIWFWMTAQ KPSCH VII +W PS D A R+PGYG+ TNIINGG+EC + AV RIGF+ +CG Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD--------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCG 232
BLAST of CN185001 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 9.045e-69 Identity = 125/227 (55.07%), Postives = 159/227 (70.04%), Query Frame = 2 Query: 137 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGDDAVRKRIGFFTTFC 817 G+ ++G I++ ++F ++L RND RCPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HETTGG A G +A GYC++R+ + S +YGRGPIQLT NY G+A+G DL+NNPDL+ATD +SFK+AIWFWMTAQ KPSCH+VI +W PSA D +A R PGYG+ TNIINGGIECG + V RIGF+ +C Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADG-PFAGGYCFVREGNQMGSG-------------FYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYC 225
BLAST of CN185001 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 9.045e-69 Identity = 123/230 (53.48%), Postives = 156/230 (67.83%), Query Frame = 2 Query: 137 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGDDAVRKRIGFFTTFCG 820 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HET GG G + GYC+++Q+ + +YYGRGPIQLT NY R G+ +GV +L+NNPDL+ATDP++SFK+AIWFWMT Q KPSCH VII +W PS D A R+PGYG+ TNIING ECG + A RIGF+ +CG Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD--------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCG 232
BLAST of CN185001 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.228e-67 Identity = 125/246 (50.81%), Postives = 163/246 (66.26%), Query Frame = 2 Query: 95 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGDDAVRKRIGFFTTFCGKFG 829 C + + +G G +G +I++ +F +LP R++++CPARGFYTYDAFI AA +FP FG SG + +RE+AAFF QT HETTGG T ++ WGYC+ +++ A+S YYGRGPIQLT NY G ALG+DL+ NPDL++TD V+SFK+AIWFWMTAQ KPSCH+VI+ W PSA D AGR+PGYG+ TNIINGGIECG +DA RIG++ +C G Sbjct: 14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSPP------------YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLG 244
BLAST of CN185001 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.910e-67 Identity = 122/222 (54.95%), Postives = 154/222 (69.37%), Query Frame = 2 Query: 155 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGDDAVRKRIGFFTTFCG 820 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FPGFG +G++T R++EIAAFF QT HETTGG A + GYC++RQ + +YYGRGPIQLT NY + G A+G +L+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA D A R+PGYG+ TNIINGGIECG +DAV RIG++ +CG Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD--------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCG 232
BLAST of CN185001 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.800e-67 Identity = 117/226 (51.77%), Postives = 151/226 (66.81%), Query Frame = 2 Query: 155 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGDDAVRKRIGFFTTFCGKFG 829 + +IS+ +FE +L +RND C A+GFYTY+AFI A + F FG +G+ R +EIAAF AQT HETTGGW AP G Y+WGYCY R+ PG+ Y+GRGPIQ+++N NY G A+GV+LLNNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI W PS D GR+PG+G+ TNIINGG+EC + + RIGF+ +C G Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILG 230
BLAST of CN185001 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.597e-65 Identity = 121/222 (54.50%), Postives = 151/222 (68.02%), Query Frame = 2 Query: 155 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGDDAVRKRIGFFTTFCG 820 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FPGFG SG++T R++EIAAFF QT HETTGG A + GYC++RQ + +YYGRGPIQLT NY + G A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA D +A R PG G+ TNIINGGIECG + AV RIG++ +CG Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD--------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCG 232
BLAST of CN185001 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.723e-65 Identity = 123/223 (55.16%), Postives = 154/223 (69.06%), Query Frame = 2 Query: 137 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGDDAVRKRIGFF 805 GT +G I++ ++F+ +L RNDARC A FYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HETTGG T +P G YA GYC++R+ + + YYGRGPIQLT NY G+A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPSCH+VI W PSA D +A R+PGYG+ TNIINGGIECG + V RIG++ Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNG-------------YYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYY 228
BLAST of CN185001 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 241.891 bits (616), Expect = 3.329e-63 Identity = 121/245 (49.39%), Postives = 147/245 (60.00%), Query Frame = 2 Query: 98 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVG-DDAVRKRIGFFTTFCGKFG 829 G G G G G G L II MF+D+L YRND +CPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF QT HET G W A G +Y WGYC++ N NY CG+ L + LL P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI + W PSA D AGR+PGYG+ TNIINGGIECG G ++A RIGF+ T+C G Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM---------------------------------NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLG 277 The following BLAST results are available for this feature:
BLAST of CN185001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185001 ID=CN185001; Name=CN185001; organism=Citrus sinensis; type=EST; length=829bpback to top |