CN184994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PEX6_PICPA (Peroxisomal biogenesis factor 6 OS=Pichia pastoris GN=PEX6 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.848e-20 Identity = 60/158 (37.97%), Postives = 93/158 (58.86%), Query Frame = -1 Query: 308 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNE--VQRTMLEIVNQLDGF---DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDL-ESRTQIFKIHTRTMNCERDIRFELLARLCP-NSTGADIRSVCTEAGMFAIRARRKTVTEK 760 VR++FQ AR K C+VFFDE+D++ R G GD+E + R + +++ +LDG D + V+ ATNRPD LD ALLRPGR D+ + G+ D E +++I + +R + + + +A CP TGAD ++C++A + A+ TV EK Sbjct: 900 VRKVFQRARDAKPCVVFFDELDSVAPKR---GNQGDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDLDKVAESCPFTFTGADFYALCSDAMLNAMTRIANTVDEK 1054
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PEX1_MOUSE (Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.848e-20 Identity = 53/144 (36.81%), Postives = 87/144 (60.42%), Query Frame = -1 Query: 329 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRAR 760 VR++F A++ K CI+FFDE ++I R D G R + +++ QLDG + + VL AT+RPD +DPALLRPGRLD+ V PD SR +I + ++++ D+ + +A + + TGAD++++ A + A++ R Sbjct: 923 VRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTG---VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTGADLKALLYNAQLEALQGR 1063
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.944e-20 Identity = 55/138 (39.86%), Postives = 82/138 (59.42%), Query Frame = -1 Query: 368 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRF--ELLARLCPNSTGADIRS 772 GA VR LF+ AR++ CIV+ DE+DA+G R G N E ++T+ +++ ++DG ++ VL +TNR D LD AL+RPGRLDR V LP L+ R +IF+ H + + + F + LA L P +G +S Sbjct: 386 GAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGTAKKS 523
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: RIX7_YEAST (Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae GN=RIX7 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.168e-19 Identity = 55/150 (36.67%), Postives = 87/150 (58.00%), Query Frame = -1 Query: 329 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMN--CERDIRFELLAR--LCPNSTGADIRSVCTEAGMFAIRAR 766 R +R++F AR+ C++FFDE+DA+ R + V T+L +LDG + R I V+ ATNRPD +DPA+LRPGRLD+ + LP+ E + I K T++ D+ FE + R C N +GAD+ ++ E+ + A++ + Sbjct: 613 RSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESSSRVVNTLL---TELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRK 759 HSP 2 Score: 91.6633 bits (226), Expect = 4.908e-18 Identity = 56/149 (37.58%), Postives = 86/149 (57.72%), Query Frame = -1 Query: 335 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTML-EIVNQLDGFDARGN----IKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIR 766 + +R+LF ARS C+VFFDE+DAI R DG G E++R ++ +++ +D + ++ ATNRPD+LD AL R GR DR++ +P+ SR I K + + + I F LA+L P GAD++++ T AG AI+ Sbjct: 285 KKIRDLFDEARSLAPCLVFFDEIDAITPKR--DG-GAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIK 430
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PEX6_HUMAN (Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.168e-19 Identity = 56/146 (38.36%), Postives = 85/146 (58.22%), Query Frame = -1 Query: 329 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL-PDLESRTQIFKIHTRTMNCERDIRFELLARLC-PNSTGADIRSVCTEAGMFAIRAR 760 VRE+F AR+ CI+FFDE+D++ +R G G + R + +++ +LDG + ++ V+ ATNRPD LDPALLRPGR D+ V G D S+ ++ TR E + + C P TGAD+ S+C++A A++ R Sbjct: 785 VREVFARARAAAPCIIFFDELDSLAPSRGRSGDSG-GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRR 929
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PEX6_GLOLA (Peroxisomal biogenesis factor 6 OS=Glomerella lagenarium GN=PEX6 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.168e-19 Identity = 56/156 (35.90%), Postives = 86/156 (55.13%), Query Frame = -1 Query: 308 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG---DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDL-ESRTQIFKIHTRTMNCERDIRFELLARLCP-NSTGADIRSVCTEAGMFAIRARRKTVTEK 760 VR +FQ AR + C+VFFDE+D++ R + G G D V + + E+ G D G + V+ ATNRPD LDPALLRPGR D+ + G+ D + + +I + TR + +A+ P TGAD ++C++A + A+ + +V K Sbjct: 1075 VRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLHPSVSLHSVAQQLPFTYTGADFYALCSDAMLKAVTRQAASVDAK 1230
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: YHI5_SCHPO (Uncharacterized AAA domain-containing protein P22H7.05c OS=Schizosaccharomyces pombe GN=SPBP22H7.05c PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.992e-19 Identity = 55/145 (37.93%), Postives = 86/145 (59.31%), Query Frame = -1 Query: 335 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL-LARLCPNSTGADIRSVCTEAGMFAIR 766 R +R LF+ AR + I+FFDE+D + R + + T+L + +DG D RG + V+ ATNRP+ LDPAL RPGR DR+ F LP+ ++R +I +I++ + + + L LA GAD++++CTEA + A+R Sbjct: 457 RQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTLLAL---MDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINSLHFSPKIPESYLLHLAESTSGYGGADLKALCTEAALNAVR 598
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: SEC18_CANAL (Vesicular-fusion protein SEC18 OS=Candida albicans GN=SEC18 PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.602e-19 Identity = 61/181 (33.70%), Postives = 94/181 (51.93%), Query Frame = -1 Query: 245 IVFFDEVDAI---GGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMN----CERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRK---------------TVTEKDFLDAVNKVIKGYQSSVQRLN 718 ++ FDE+D++ G+ DG G GDN V ++++++DG D NI V+ TNR D +D ALLRPGR + ++E LPD + R IF IHT+ + D+ F+ L+ L N TGA+I +C A +AI K +T DFL A+N + + + + L+ Sbjct: 381 VIIFDELDSVFKQRGSGKSDGTGVGDNVVN----QLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAISRHTKKGALAQIDPESIAKMKITRDDFLLALNDIRPAFGTDEEDLS 557
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PEX6_DICDI (Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.602e-19 Identity = 51/146 (34.93%), Postives = 85/146 (58.22%), Query Frame = -1 Query: 329 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL-PDLESRTQIFKIHTRTMNCERDIRFELLARLCP-NSTGADIRSVCTEAGMFAIRAR 760 +RE+F AR K C++FFDE+D++ +R +G + R + +++ +LDG ++ ++ ATNRPD LD +L+RPGRLDR + G+ + E++ +I + TR N D+ + CP N TGAD ++ ++A A R Sbjct: 1000 IREIFNKARQAKPCVIFFDELDSLAPSR-GNGADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNAFHER 1144
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PEX6_PENCH (Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.399e-19 Identity = 57/157 (36.31%), Postives = 88/157 (56.05%), Query Frame = -1 Query: 308 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDA----RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDL-ESRTQIFKIHTRTMNCERDIRFELLARLCP-NSTGADIRSVCTEAGMFAIRARRKTVTEK 760 VR +FQ AR + C+VFFDE+D++ R + G G + R + +++ +LDG + G + V+ ATNRPD LD ALLRPGR D+ + G+ D + I + TR D+ + +A P TGAD+ ++C++A + AI + V EK Sbjct: 1111 VRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSG-GVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPDVSLDRVAEQLPLTYTGADLYALCSDAMLKAITRKATAVDEK 1266 The following BLAST results are available for this feature:
BLAST of CN184994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 337
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184994 ID=CN184994; Name=CN184994; organism=Citrus sinensis; type=EST; length=772bpback to top |