CN184994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PEX1_DICDI (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.399e-19 Identity = 54/141 (38.30%), Postives = 76/141 (53.90%), Query Frame = -1 Query: 338 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAI 760 VR++F A S K C++FFDE D+I R D G R + + + QLDG + + VL AT+RPD +DPALLRPGRLD+ + +P+ R I MN I E L+ TGAD+R++ A + +I Sbjct: 948 VRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSG---VTDRVVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTNTQYYTGADLRALMYNAQLKSI 1085
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PEX1_SCHPO (Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe GN=pex1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.797e-19 Identity = 51/149 (34.23%), Postives = 82/149 (55.03%), Query Frame = -1 Query: 314 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVT 760 VR+LF A+ K C++FFDE D++ R D G R + +I+ Q+DG ++ + ++ AT RPD +DPALLRPGRLD+ + LP+ E R ++ + + E + L+ L T AD+ S+ +A + A+ K V+ Sbjct: 688 VRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTG---VTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKRVS 833
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PEX1_HUMAN (Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.797e-19 Identity = 52/141 (36.88%), Postives = 84/141 (59.57%), Query Frame = -1 Query: 338 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAI 760 VR++F A++ K CI+FFDE ++I R D G R + +++ QLDG + + VL AT+RPD +DPALLRPGRLD+ V PD SR +I + + ++ D+ + +A + + TGAD++++ A + A+ Sbjct: 922 VRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTG---VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEAL 1059
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: SEC18_SCHPO (Vesicular-fusion protein sec18 OS=Schizosaccharomyces pombe GN=sec18 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.888e-19 Identity = 66/179 (36.87%), Postives = 89/179 (49.72%), Query Frame = -1 Query: 248 IVFFDEVDAI----GGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMN----CERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKT--------------VTEKDFLDAVNKVIKGYQSSVQRL 718 I+ FDE+DAI G + D GVG + + +++ ++DG D NI V+ TNR D +D ALLRPGRL+ +E LPD R QI KIHT M E D+ E LA L N +GA+I + A FA K V DFL+A+++V Y S + L Sbjct: 375 IIIFDELDAICKKRGSSGGDTGVG-----DQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFAFYRHIKVGTTAAVSGNLENIKVNRNDFLNALSEVRPAYGVSEEEL 548
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PEX6_PICAN (Peroxisomal biogenesis factor 6 OS=Pichia angusta GN=PEX6 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.291e-18 Identity = 57/156 (36.54%), Postives = 88/156 (56.41%), Query Frame = -1 Query: 308 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFD-ARGN--IKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDL-ESRTQIFKIHTRTMNCERDIRFELLARLCP-NSTGADIRSVCTEAGMFAIRARRKTVTEK 760 VR +FQ AR K C++FFDE+D++ R + G G + R + +++ +LDG A G + V+ ATNRPD LD ALLRPGR D+ + G+ D E + +I + TR + + +A CP TGAD ++C++A + A+ V +K Sbjct: 894 VRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSG-GVMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQLDPSVDLGRIAETCPFTYTGADFYALCSDAMLNAMTRTAGAVEKK 1048
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.687e-18 Identity = 56/168 (33.33%), Postives = 90/168 (53.57%), Query Frame = -1 Query: 272 GARMVRELFQMARSKKACIVFFDEVDAIGGAR-FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKG 772 GA +R+LF A+ C+VF DE+D++GG R F N+ T+ +++ ++DGF ++ I VL ATN+ + LD ALLRPGR D ++ P E R + ++ + + +I E LA TGADI+++ +A + A V DA +++I G Sbjct: 243 GASRIRQLFTTAKQNSPCLVFIDEIDSVGGNRTFSPHHPFANQ---TINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAAALRNDPFVEMHHLWDARDRLIMG 407
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PEX6_NEUCR (Peroxisomal biogenesis factor 6 OS=Neurospora crassa GN=pex-6 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.758e-18 Identity = 55/156 (35.26%), Postives = 82/156 (52.56%), Query Frame = -1 Query: 308 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG---DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDL-ESRTQIFKIHTRTMNCERDIRFELLARLCP-NSTGADIRSVCTEAGMFAIRARRKTVTEK 760 VR +FQ AR + C+VFFDE+D++ R + G G D V + + E+ G G + V+ ATNRPD LDPALLRPGR D+ + G+ D + + I + TR + +A P TGAD ++C++A + A+ + V K Sbjct: 1072 VRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTLHPTVSLRSVAERLPFTYTGADFYALCSDAMLKAVTRQATLVDTK 1227
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: SEC18_YEAST (Vesicular-fusion protein SEC18 OS=Saccharomyces cerevisiae GN=SEC18 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 8.371e-18 Identity = 64/180 (35.56%), Postives = 90/180 (50.00%), Query Frame = -1 Query: 248 IVFFDEVDAI---GGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMN----CERDIRFELLARLCPNSTGADIRSVCTEAGMFAIR----------------ARRKTVTEKDFLDAVNKVIKGYQSSVQRL 718 I+ FDE+D++ G+R D GDN V +++ ++DG D NI V+ TNR D +D ALLRPGR + +VE LPD + R QIF I T+ M D+ LA L N +GA+I + A FAI + VT +DFL+A+N V + S + L Sbjct: 345 IIIFDELDSVFKQRGSRGDGTGVGDNVVN----QLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKDIAKLKVTREDFLNALNDVTPAFGISEEDL 520
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: PEX1_YEAST (Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae GN=PEX1 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.181e-17 Identity = 50/145 (34.48%), Postives = 78/145 (53.79%), Query Frame = -1 Query: 353 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMN---------CERDIRFELLARLCPNSTGADIRSVCTEA 760 +RELF+ A+S K CI+FFDE D+I R D G R + +++ Q+DG + + +L AT+RPD +D ALLRPGRLD+ V +P R I + + + E++ +L+A +GAD++ +C A Sbjct: 779 IRELFERAQSVKPCILFFDEFDSIAPKRGHDSTG---VTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNA 920
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: NSF_DICDI (Vesicle-fusing ATPase OS=Dictyostelium discoideum GN=nsfA PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.181e-17 Identity = 62/175 (35.43%), Postives = 88/175 (50.29%), Query Frame = -1 Query: 260 IVFFDEVDAI----GGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMN----CERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKT--------------VTEKDFLDAVNKVIKGYQSS 718 I+ FDE+DAI G + D GVG D+ V +++ +DG ++ NI V+ TNR D +D ALLRPGRL+ VE LPD R QIFKIHT M ++D+ A N +GA+I V A +A + T V ++DF A+ +V + S+ Sbjct: 328 IIIFDELDAICKSRGSRQGDSGVG-DSVVN----QLLAMIDGVESLNNILVIGMTNRKDMIDEALLRPGRLEVHVEISLPDEHGREQIFKIHTAKMRDQNALDKDVNLANYAHTTRNYSGAEIEGVVKSAASYAFSRQVDTKNIKNVEIKPEDIKVCDQDFKRAITEVTPSFGST 497 The following BLAST results are available for this feature:
BLAST of CN184994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 337
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184994 ID=CN184994; Name=CN184994; organism=Citrus sinensis; type=EST; length=772bpback to top |