CN184994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: MPA_MYCTU (Proteasome-associated ATPase OS=Mycobacterium tuberculosis GN=mpa PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14 Identity = 43/106 (40.57%), Postives = 69/106 (65.09%), Query Frame = -1 Query: 464 RMVRELFQMARSKKA----CIVFFDEVDAIGGARFDDGVGGDNEVQRTML-EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIF 766 R +R +FQ AR K + IVFFDE+D+I R G G ++V+ T++ ++++++DG + N+ V+ A+NR D +DPA+LRPGRLD K++ PD E+ I+ Sbjct: 347 RHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR---GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIY 449
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: MPA_MYCLE (Proteasome-associated ATPase OS=Mycobacterium leprae GN=mpa PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14 Identity = 43/106 (40.57%), Postives = 69/106 (65.09%), Query Frame = -1 Query: 464 RMVRELFQMARSKKA----CIVFFDEVDAIGGARFDDGVGGDNEVQRTML-EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIF 766 R +R +FQ AR K + IVFFDE+D+I R G G ++V+ T++ ++++++DG + N+ V+ A+NR D +DPA+LRPGRLD K++ PD E+ I+ Sbjct: 347 RHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR---GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIY 449
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: MPA_MYCBO (Proteasome-associated ATPase OS=Mycobacterium bovis GN=mpa PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14 Identity = 43/106 (40.57%), Postives = 69/106 (65.09%), Query Frame = -1 Query: 464 RMVRELFQMARSKKA----CIVFFDEVDAIGGARFDDGVGGDNEVQRTML-EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIF 766 R +R +FQ AR K + IVFFDE+D+I R G G ++V+ T++ ++++++DG + N+ V+ A+NR D +DPA+LRPGRLD K++ PD E+ I+ Sbjct: 347 RHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR---GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIY 449
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: KTNA1_MACFA (Katanin p60 ATPase-containing subunit A1 OS=Macaca fascicularis GN=KATNA1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.578e-14 Identity = 51/162 (31.48%), Postives = 85/162 (52.47%), Query Frame = -1 Query: 305 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM-LEIVNQLDGF-------DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKD 766 ++VR LF+MAR +F DE+D+I R G ++E R + E++ Q+DG D + VL ATN P +D AL R RL++++ LP + R ++ +I R + D+ +A +GADI +VC +A + A+R R + +T ++ Sbjct: 288 KLVRLLFEMARFYSPATIFIDEIDSICSRR---GTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEE 444
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: KTNA1_HUMAN (Katanin p60 ATPase-containing subunit A1 OS=Homo sapiens GN=KATNA1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.578e-14 Identity = 51/162 (31.48%), Postives = 85/162 (52.47%), Query Frame = -1 Query: 305 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM-LEIVNQLDGF-------DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKD 766 ++VR LF+MAR +F DE+D+I R G ++E R + E++ Q+DG D + VL ATN P +D AL R RL++++ LP + R ++ +I R + D+ +A +GADI +VC +A + A+R R + +T ++ Sbjct: 288 KLVRLLFEMARFYSPATIFIDEIDSICSRR---GTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEE 444
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.578e-14 Identity = 51/162 (31.48%), Postives = 86/162 (53.09%), Query Frame = -1 Query: 305 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM-LEIVNQLDGF-------DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKD 766 ++VR LF+MAR +F DE+D+I R G ++E R + E++ Q+DG D + VL ATN P +D AL R RL++++ LP + R ++ +I+ R + D+ +A +GADI +VC +A + A+R R + +T ++ Sbjct: 289 KLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSEEHEASRRVKAELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRINLRELELADDVDLANIAEKMEGYSGADITNVCRDASLMAMRRRIEGLTPEE 445
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEEL (Fidgetin-like protein 1 OS=Caenorhabditis elegans GN=figl-1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.578e-14 Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = -1 Query: 335 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGN--IKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI---RFELLARLCPNSTGADIRSVCTEAGMFAIR 772 G ++VR LF +AR K ++F DE+D++ +R + +R E + QLDG + + + VL ATNRP LD A R R +++ LP+ ESRTQI + + DI E + L +GAD+R +CTEA M IR Sbjct: 393 GEKLVRALFSVARLKLPSVIFIDEIDSLLSSRSE---SEHESSRRIKTEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARR--RFQKRLYIALPEPESRTQI--VQNLLVGTRHDITNHNLERIRELTDGYSGADMRQLCTEAAMGPIR 536
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.251e-13 Identity = 58/159 (36.48%), Postives = 86/159 (54.09%), Query Frame = -1 Query: 305 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGF--DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNC---ERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKD 766 ++V++LF MAR K I+F DEVDA+ G R G G +R E++ Q++G D++G + VL ATN P LD A+ R R +R++ LPDL +RT +F+I+ C + D R L + +G+DI V +A M IR + KD Sbjct: 212 KLVKQLFAMARENKPSIIFIDEVDALTGTR---GEGESEASRRIKTELLVQMNGVGNDSQG-VLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYR--TLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKD 362
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: KTNA1_SALSA (Katanin p60 ATPase-containing subunit A1 OS=Salmo salar GN=katna1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.634e-13 Identity = 49/162 (30.25%), Postives = 86/162 (53.09%), Query Frame = -1 Query: 305 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM-LEIVNQLDGF-------DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKD 766 ++VR LF+MAR +F DE+D++ R G ++E R + E++ Q+DG D + VL ATN P +D AL R RL++++ LP + R ++ +I+ + + D+ +A +GADI +VC +A + A+R R + +T ++ Sbjct: 283 KLVRILFEMARFYAPTTIFIDEIDSMCSRR---GTSEEHEASRRVKAELLVQMDGVGGASDNEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGRVELLRINLKELELANDVDMAKIAEQSEGYSGADITNVCRDASLMAMRRRIEGLTPEE 439
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.108e-13 Identity = 50/159 (31.45%), Postives = 87/159 (54.72%), Query Frame = -1 Query: 296 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDA-RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIR-FELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLD 766 R+VR+LF+MAR +K I+F DE+D++ G+R + G +R E + Q++G + VL ATN P TLD A+ R R ++++ LP+ +R ++F+++ + E + F+ LA++ +G+DI V +A M +R K+ D Sbjct: 208 RLVRQLFEMAREQKPSIIFIDEIDSLCGSRSE---GESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVRRIHTATHFKEVYD 361 The following BLAST results are available for this feature:
BLAST of CN184994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 337
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184994 ID=CN184994; Name=CN184994; organism=Citrus sinensis; type=EST; length=772bpback to top |