CN184994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: SPAST_DROPS (Spastin OS=Drosophila pseudoobscura pseudoobscura GN=spas PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11 Identity = 56/203 (27.59%), Postives = 96/203 (47.29%), Query Frame = -1 Query: 218 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM-LEIVNQLDGFDARGN---IKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI-RFELLARLCPNSTGADIRSVCTEAGMFAIRA------------RRKTVTEKDFLDAVNKVIKGY-QSSVQRLNIWSTIDSDV 772 G ++VR LF +AR + I+F DEVD++ R G++E R + E + + DG + I VL ATNRP LD A LR R ++V LPD ++R + + D L+++ +G+D+ ++ +A + IR + +TEKDF +++ ++ + Q S+ WS+ D+ Sbjct: 590 GEKLVRALFAVARHLQPSIIFIDEVDSLLSERSS----GEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTDALRRLSKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDINAMRHITEKDFHNSLKRIRRSVAQQSLSSYEKWSSDYGDI 786
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: SPAST_CAEEL (Probable spastin homolog spas-1 OS=Caenorhabditis elegans GN=spas-1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11 Identity = 49/150 (32.67%), Postives = 81/150 (54.00%), Query Frame = -1 Query: 335 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM-LEIVNQLDGFDARGNIKVLM--ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTG---ADIRSVCTEAGMFAIR 766 + +R LFQ+AR+ + I+F DE+D+I R + D EV R M E + Q DG + + ++L+ ATNRP LD A+LR R +++ LPD E+R ++ + N + + + N++G +D+ ++C EA M IR Sbjct: 318 KTIRGLFQIARNAQPSIIFIDEIDSILCERSEK----DAEVSRRMKTEFLVQFDGATSSADDRILVIGATNRPHELDDAVLR--RFPKRIMLNLPDEEARKELITKTLKKHNMMDGLISSDIRYIASNTSGFSNSDLVALCKEAAMVPIR 461
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: KATL2_XENTR (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis GN=katnal2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 58/203 (28.57%), Postives = 96/203 (47.29%), Query Frame = -1 Query: 239 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM-LEIVNQLDGFDARGN--IKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFK------IHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIR------------------ARRKTVTEKDFLDAVNKVIKGYQSSVQRLNIW 766 ++VR LF++AR +F DE++++ R G GG++E R M E++ Q+DG AR + + VL A+N P LD A+LR RL++++ LP E+R + + ++ + D+ + L +G+DIR VC EA M +R TVT DFL+ + +S ++ W Sbjct: 337 KLVRVLFELARYHAPSTIFLDELESVMSQR-GTGPGGEHEGSRRMKTELLVQMDGL-ARSDDLVFVLAASNLPWELDYAMLR--RLEKRILVDLPSKEARQAMIQHWLPPVSNSSGVELRTDLDYSTLGAETDGYSGSDIRLVCKEAAMRPVRKIFDALENHHSEHKNLPVISLDTVTTSDFLEVLAHTKPSAKSLAEKYAAW 535
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: FIGL1_XENTR (Fidgetin-like protein 1 OS=Xenopus tropicalis GN=fignl1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 47/150 (31.33%), Postives = 75/150 (50.00%), Query Frame = -1 Query: 332 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM--ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCE-RDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA 772 G +MVR LF +AR + ++F DE+D++ R G G +R E + QLDG + ++L+ ATNRP +D A R RL +++ LP+ +R QI +C + E + +GAD+ +C EA + IR+ Sbjct: 460 GEKMVRALFTVARCHQPAVIFIDEIDSLLSQR---GEGEHESSRRIKTEFLVQLDGATTSSDDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVSLMAKEHCSLAEQEVEAIVLQADGFSGADMTQLCREAALGPIRS 604
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: SPAST_DROWI (Spastin OS=Drosophila willistoni GN=spas PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11 Identity = 53/199 (26.63%), Postives = 90/199 (45.23%), Query Frame = -1 Query: 218 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIR-FELLARLCPNSTGADIRSVCTEAGMFAIR------------ARRKTVTEKDFLDAVNKVIKGY-QSSVQRLNIWSTIDSDV 772 G ++VR LF +AR + I+F DEVD++ R + ++ L + L G I VL ATNRP LD A LR R ++V LPD ++R + + D LA++ +G+D+ ++ +A + IR + + +TEKDF +++ ++ + S+ WS D+ Sbjct: 579 GEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITEGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRPITEKDFHNSLKRIRRSVAPQSLNSYEKWSQDYGDI 775
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: SPAST_DROGR (Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11 Identity = 53/199 (26.63%), Postives = 91/199 (45.73%), Query Frame = -1 Query: 218 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI-RFELLARLCPNSTGADIRSVCTEAGMFAIR------------ARRKTVTEKDFLDAVNKVIKGY-QSSVQRLNIWSTIDSDV 772 G ++VR LF +AR + I+F DEVD++ R + ++ L + L G I VL ATNRP LD A LR R ++V LPD+++R + + D LA++ +G+D+ ++ +A + IR + + +TEKDF +++ ++ + S+ WS D+ Sbjct: 584 GEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDVQTRELLLNRLLQKQGSPLDSDALGRLAKITEGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRQITEKDFHNSLKRIRRSVAPQSLNSYEKWSQDYGDI 780
BLAST of CN184994 vs. ExPASy Swiss-Prot
Match: FIGL1_XENLA (Fidgetin-like protein 1 OS=Xenopus laevis GN=fignl1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11 Identity = 47/150 (31.33%), Postives = 74/150 (49.33%), Query Frame = -1 Query: 332 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM--ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCE-RDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA 772 G +MVR LF +AR + ++F DE+D++ R G G +R E + QLDG ++L+ ATNRP +D A R RL +++ LP+ +R QI +C + E + +GAD+ +C EA + IR+ Sbjct: 459 GEKMVRALFTVARCHQPAVIFIDEIDSLLSQR---GEGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVSLMSKEHCSLTEQEVEAIVLQADGFSGADMTQLCREAALGPIRS 603 The following BLAST results are available for this feature:
BLAST of CN184994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 337
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184994 ID=CN184994; Name=CN184994; organism=Citrus sinensis; type=EST; length=772bpback to top |