CN184992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_BRUA1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella abortus (strain S19) GN=sucC PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.188e-40 Identity = 101/237 (42.62%), Postives = 138/237 (58.23%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQ L+ YG + G+AV SV++ ++ + + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLEINPL + ++ DAKV F A FR Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFR 235
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_SULNB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sulfurovum sp. (strain NBC37-1) GN=sucC PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.330e-40 Identity = 92/235 (39.15%), Postives = 141/235 (60.00%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA-PKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +N+HEYQ ++ A+YG+ PKG+ SVD +A +++ VVK+QI AGGRGLG GGV + K +EV +LA ++LG LVT QTGP+GK+V K+Y+ + + +E Y +++LDRK P+I+ ++GG +IED+AE P I+ VP+D G ++ GL A++ + I +KLYKL+ + D ++EINPL T + +A D K+ F A +R Sbjct: 1 MNVHEYQAKQIFAEYGVPTPKGIMAESVDAAVEAAKEL--GGPIWVVKAQIHAGGRGLG-------GGVKLAKSLDEVRELADEILGMTLVTHQTGPEGKLVQKLYIEDGADIKDEFYLSVILDRKLEMPLIMASTEGGMNIEDVAENTPEKIITVPVDPTIGFQGFHGRELAFGLGITDKAEQKNIITFAQKLYKLYMDKDAEMIEINPLVRTGSGEFLALDGKMGFDNSALYR 226
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_BART1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=sucC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.545e-39 Identity = 97/237 (40.93%), Postives = 136/237 (57.38%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQ L+ +YG + G+AV S+++ +K + + VVKSQI AGGRG G FK KGGV + + EEV +MLG+ LVTKQTGP+GK V+++Y+ + + E+Y ++++DR + ++GG IE +AE+ P I +PIDV G+T D A++ D L + R D + LYK FCE D +LLEINPL L DAKV F A FR Sbjct: 1 MNIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKL--PGPLYVVKSQIHAGGRGKGQFKELGPDAKGGVRLAQSVEEVVANVQEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYLSLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDVTEGVTSADCARLCDALELHDSAREDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFR 235
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_BARHE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella henselae GN=sucC PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.630e-39 Identity = 97/237 (40.93%), Postives = 137/237 (57.81%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQ L+ +YG + G+AV SV++ +K + + VVKSQI AGGRG G FK KGGV + K EEV +MLG+ LVTKQTGP+GK V+++Y+ + + E+Y ++++DR + ++GG IE +AE+ P I+ +PI+ G+T D A++ D L + R D + LYK FCE D +LLEINPL + L DAKV F A FR Sbjct: 1 MNIHEYQAKRLLHEYGAPIANGVAVYSVEQAEKWAKKL--PGPLYVVKSQIHAGGRGKGKFKELDPDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYLSLLVDRNVGRVAFVVSTEGGMDIETVAEETPEKILTLPINSTQGVTSSDCARLCDALDLHDSAREDGEKLFPILYKAFCEKDMSLLEINPLIVMTNGHLRVLDAKVSFDNNALFR 235
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_BARBK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=sucC PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.630e-39 Identity = 100/237 (42.19%), Postives = 136/237 (57.38%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQ L+ +YG V G+AV SV++ +K + + VVKSQI AGGRG G FK S KGGV + K EEV +MLG+ LVTKQTGP+GK V+++Y+ + ++ E+Y ++++DR T + ++GG IE +A + P I + ID G+TD D K+ D L R D + LYK FCE D +LLEINPL +L DAKV F A FR Sbjct: 1 MNIHEYQAKRLLHEYGAPVANGVAVYSVEQAEKWAKKL--PGPLYVVKSQIHAGGRGKGNFKELDSDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGANIERELYLSLLIDRTTGRVAFVVSTEGGMDIETVAAETPEKICTLSIDPAEGVTDADCVKLCDELNLSGNAREDGEKLFPILYKAFCEKDMSLLEINPLIVMDDGRLRVLDAKVSFDNNALFR 235
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCB2_CAEEL (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C50F7.4 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.298e-38 Identity = 94/242 (38.84%), Postives = 144/242 (59.50%), Query Frame = 1 Query: 145 QQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKG--GVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 + Q R LN+ E+Q E++ K+G +V + ++ E ++ F DH E VVK+QILAGGRG G F +G KG GV I K+++ + +M+G+ LVTKQT +G V KV + E + + E Y A+++DR++ GP+++ GG IE +AEK P I K PID+ G+T+ + K+ L + A +++K+LY LF D T +EINPL ET+ ++ DAK+ F AA+R Sbjct: 14 KSQRRFLNLQEFQSKEILEKHGCSVQNFVVASNRKEAEEKWMS-FGDH-EYVVKAQILAGGRGKGKFINGTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVRVDKVMIAEGVDIKRETYLAVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQMGMTEGQSLKIAKDLQFEGKLIGVAAQEIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSAAYR 253
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_SULDN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=sucC PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.001e-38 Identity = 92/230 (40.00%), Postives = 134/230 (58.26%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRND---AIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF 840 +NIHEYQ ++ AKYG+ PKGL SV + + + VVK+QI AGGRGLG GGV + + EEVE L+ ++LG LVT QTGP+GK+V K+Y+ E + E+Y ++LDR P+I+ ++GG +IED+A P I+K+ +D G ++V GL + D N+ I KLYKL+ E+D ++EINPL +T + +A D K+ F Sbjct: 1 MNIHEYQAKQIFAKYGVPTPKGLMAESVKQAVANAETL--GGSIWVVKAQIHAGGRGLG-------GGVKLARSLEEVEQLSKEILGMTLVTHQTGPEGKLVQKLYIEEGADIKEELYLGVVLDRAREMPVIMASTEGGMAIEDVAHNTPEKIIKIAVDPAIGFQGFHGRELVFGLG--ITDPNEQKKLISFASKLYKLYMENDAEMIEINPLVKTGSGEFLALDGKMGF 219
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_EXIS2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=sucC PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.920e-38 Identity = 92/234 (39.32%), Postives = 136/234 (58.12%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +N+HEYQ EL+ YG+ VP G+A +V+E A + + K VVK+QI AGGRG GGV + K +EEV++ A ++LG+ LVT QTGP+GK++ ++ + E ++ E Y I+LDR T +I+G S+GG IE++AE P I+K +D G+ A K+ + V N + V KLY F + DC++ EINPL T ++A DAK+ F A +R Sbjct: 1 MNVHEYQAKELLRSYGVPVPNGIAAFTVEEAVDAAEQLSGPIK--VVKAQIHAGGRGKA-------GGVKLAKSQEEVKEFATELLGKTLVTHQTGPEGKVIQRLLVEEGCAIDKEYYLGIVLDRVTGRVVIMGSSEGGMDIEEVAEATPEKIIKEVVDPAVGLQAFQARKLAFAMGVPVKLVNKFVGMVTKLYTFFVDKDCSIAEINPLVTTKDGDVLALDAKLNFDSNALYR 225
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_ACIBL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidobacteria bacterium (strain Ellin345) GN=sucC PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.920e-38 Identity = 93/228 (40.79%), Postives = 134/228 (58.77%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDH-KELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF 840 + IHEYQG ++ KYG+ VP+G V + +E ++ D+ D K +VVK+QI AGGRG G GGV I K +E LAGK+LG L+T QTGP+GK V ++ + E L + E+Y +I+LDR P+ + + GG IE++A K PN I+K I+ G+ A K+ L K A++ ++ LYK + E+D +L+EINP TS +L A DAK F Sbjct: 1 MKIHEYQGKAILRKYGVAVPRGEMVTTREEAERVANDLMHDGAKGVVVKAQIHAGGRGKG-------GGVKIAKSVDEAGQLAGKILGMTLITHQTGPEGKKVQRLLIEETLPIERELYLSIVLDRSNGKPVFMASAAGGMEIEEVAAKDPNAIIKEWIEPGYGLGAFQARKIAFKLGLKPELIGQAVKFMQALYKTYDETDASLVEINPFITTSDNRLFALDAKFNF 221
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_BACP2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus pumilus (strain SAFR-032) GN=sucC PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.120e-38 Identity = 92/234 (39.32%), Postives = 138/234 (58.97%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQG E++ KYG++VP G + DE KA++++ + VVK+QI AGGRG GGV I K K+EV+ A ++LG+ LVT QTGP+G+ + ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P IVKV ID G+ A +V + A++ + LY F E DC++ EINPL T +++A DAK+ F A +R Sbjct: 1 MNIHEYQGKEILRKYGVSVPNGKVAFTPDEAVKASEEL--ESSVYVVKAQIHAGGRGKA-------GGVKIAKTKDEVKGFAEELLGKTLVTHQTGPEGREIKRLLIEEGCDIQKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVVIDPAIGLQGYQAREVAFKINIPTKLVGQAVKFMTSLYNAFIEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYR 225 The following BLAST results are available for this feature:
BLAST of CN184992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184992 ID=CN184992; Name=CN184992; organism=Citrus sinensis; type=EST; length=861bpback to top |